RNA–Protein interactions for RNA: ENST00000635776.1

SCN1A-210, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1A, Length 10,107 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-210ENST00000635776 SCGB3A1Q96QR1 104 aa3.51□□□□□ -1.85
SCN1A-210ENST00000635776 IGHV3OR16-13A0A075B7E8 117 aa3.51□□□□□ -1.85
SCN1A-210ENST00000635776 IGHV3-74A0A0B4J1X5 117 aa3.51□□□□□ -1.85
SCN1A-210ENST00000635776 SNAI2O43623 268 aa3.51□□□□□ -1.85
SCN1A-210ENST00000635776 SIGLEC8Q9NYZ4 499 aa3.51□□□□□ -1.85
SCN1A-210ENST00000635776 ABCA2Q9BZC7 2435 aa3.51□□□□□ -1.85
SCN1A-210ENST00000635776 C19orf84I3L1E1 186 aa3.51□□□□□ -1.85
SCN1A-210ENST00000635776 CD5LO43866 347 aa3.51□□□□□ -1.85
SCN1A-210ENST00000635776 IGLV1-40P01703 118 aa3.51□□□□□ -1.85
SCN1A-210ENST00000635776 BDP1A6H8Y1 2624 aa3.51□□□□□ -1.85
SCN1A-210ENST00000635776 IGHV3-66A0A0C4DH42 116 aa3.51□□□□□ -1.85
SCN1A-210ENST00000635776 LINC01619G3V211 115 aa3.51□□□□□ -1.85
SCN1A-210ENST00000635776 PPIFP30405 207 aaKnown RBP3.51□□□□□ -1.85
SCN1A-210ENST00000635776 RPL32P62910 135 aaKnown RBP3.51□□□□□ -1.85
SCN1A-210ENST00000635776 ORAOV1Q8WV07 137 aa3.51□□□□□ -1.85
SCN1A-210ENST00000635776 C7orf71A4D174 169 aa3.51□□□□□ -1.85
SCN1A-210ENST00000635776 HINT1P49773 126 aaPredicted RBP3.51□□□□□ -1.85
SCN1A-210ENST00000635776 USF3Q68DE3 2245 aa3.5□□□□□ -1.85
SCN1A-210ENST00000635776 C2orf70A6NJV1 201 aa3.5□□□□□ -1.85
SCN1A-210ENST00000635776 COX8AP10176 69 aa3.5□□□□□ -1.85
SCN1A-210ENST00000635776 RNASE4P34096 147 aaKnown RBP3.5□□□□□ -1.85
SCN1A-210ENST00000635776 SUMO2P61956 95 aaKnown RBP3.5□□□□□ -1.85
SCN1A-210ENST00000635776 SMIM2Q9BVW6 85 aa3.5□□□□□ -1.85
SCN1A-210ENST00000635776 TRAV12-1A0A0B4J245 112 aa3.5□□□□□ -1.85
SCN1A-210ENST00000635776 H3BVH4 76 aa3.5□□□□□ -1.85
SCN1A-210ENST00000635776 HLA-DRB4P13762 266 aa3.5□□□□□ -1.85
SCN1A-210ENST00000635776 DEFB112Q30KQ8 113 aa3.5□□□□□ -1.85
SCN1A-210ENST00000635776 OR4C5Q8NGB2 326 aa3.5□□□□□ -1.85
SCN1A-210ENST00000635776 SPXQ9BT56 116 aa3.5□□□□□ -1.85
SCN1A-210ENST00000635776 HLA-DRB4X5D2U9 266 aa3.5□□□□□ -1.85
SCN1A-210ENST00000635776 CDKN1BP46527 198 aa3.5□□□□□ -1.85
SCN1A-210ENST00000635776 WFDC3Q8IUB2 231 aa3.5□□□□□ -1.85
SCN1A-210ENST00000635776 PIFOQ8TCI5 191 aa3.5□□□□□ -1.85
SCN1A-210ENST00000635776 TP53TG3Q9ULZ0 132 aa3.5□□□□□ -1.85
SCN1A-210ENST00000635776 NUPR1O60356 82 aa3.5□□□□□ -1.85
SCN1A-210ENST00000635776 ERCC8Q13216 396 aa3.5□□□□□ -1.85
SCN1A-210ENST00000635776 C1QTNF4Q9BXJ3 329 aa3.5□□□□□ -1.85
SCN1A-210ENST00000635776 SPTAN1Q13813 2472 aaKnown RBP3.5□□□□□ -1.85
SCN1A-210ENST00000635776 IGHV3OR16-8A0A075B7F1 116 aa3.5□□□□□ -1.85
SCN1A-210ENST00000635776 IGHV3-49A0A0A0MS15 119 aa3.5□□□□□ -1.85
SCN1A-210ENST00000635776 TMEM213A2RRL7 107 aa3.5□□□□□ -1.85
SCN1A-210ENST00000635776 PLA2G5P39877 138 aa3.5□□□□□ -1.85
SCN1A-210ENST00000635776 IFI27P40305 119 aaPredicted RBP3.5□□□□□ -1.85
SCN1A-210ENST00000635776 NMUP48645 174 aa3.5□□□□□ -1.85
SCN1A-210ENST00000635776 CD7P09564 240 aa3.5□□□□□ -1.85
SCN1A-210ENST00000635776 TRPT1Q86TN4 253 aaKnown RBP3.5□□□□□ -1.85
SCN1A-210ENST00000635776 IGHV4-38-2P0DP08 117 aa3.5□□□□□ -1.85
SCN1A-210ENST00000635776 PIK3CD-AS1Q5SR53 167 aa3.5□□□□□ -1.85
SCN1A-210ENST00000635776 SPAG8Q99932 426 aaPredicted RBP3.5□□□□□ -1.85
SCN1A-210ENST00000635776 FOXC2Q99958 501 aa3.5□□□□□ -1.85
SCN1A-210ENST00000635776 IGHV1OR15-1A0A075B7D0 117 aa3.5□□□□□ -1.85
SCN1A-210ENST00000635776 PRSS47A8MTI9 375 aa3.5□□□□□ -1.85
SCN1A-210ENST00000635776 A8MWV9 139 aa3.5□□□□□ -1.85
SCN1A-210ENST00000635776 K7ERU9 68 aa3.5□□□□□ -1.85
SCN1A-210ENST00000635776 CIDEAO60543 219 aa3.5□□□□□ -1.85
SCN1A-210ENST00000635776 DEFB125Q8N687 156 aa3.5□□□□□ -1.85
SCN1A-210ENST00000635776 ZNF415Q09FC8 603 aa3.49□□□□□ -1.85
SCN1A-210ENST00000635776 ZNF56Q15929 161 aa3.49□□□□□ -1.85
SCN1A-210ENST00000635776 ANKRD39Q53RE8 183 aa3.49□□□□□ -1.85
SCN1A-210ENST00000635776 LINC00322Q6ZN03 302 aaPredicted RBP3.49□□□□□ -1.85
SCN1A-210ENST00000635776 F8W735 103 aaPredicted RBP3.49□□□□□ -1.85
SCN1A-210ENST00000635776 NPYP01303 97 aa3.49□□□□□ -1.85
SCN1A-210ENST00000635776 FBLN7Q53RD9 439 aa3.49□□□□□ -1.85
SCN1A-210ENST00000635776 DGAT2L7PQ6IED9 249 aa3.49□□□□□ -1.85
SCN1A-210ENST00000635776 Q6YL49 198 aa3.49□□□□□ -1.85
SCN1A-210ENST00000635776 LINC00527Q9UJ94 153 aa3.49□□□□□ -1.85
SCN1A-210ENST00000635776 IGKV3-7A0A075B6H7 116 aa3.49□□□□□ -1.85
SCN1A-210ENST00000635776 SMAD7O15105 426 aaKnown RBP3.49□□□□□ -1.85
SCN1A-210ENST00000635776 CDSNQ15517 529 aa3.49□□□□□ -1.85
SCN1A-210ENST00000635776 TNFRSF18Q9Y5U5 241 aa3.49□□□□□ -1.85
SCN1A-210ENST00000635776 FABP2P12104 132 aa3.49□□□□□ -1.85
SCN1A-210ENST00000635776 IGLL1P15814 213 aa3.49□□□□□ -1.85
SCN1A-210ENST00000635776 LINC00310P59036 64 aa3.49□□□□□ -1.85
SCN1A-210ENST00000635776 A0A1B0GUS0 222 aa3.49□□□□□ -1.85
SCN1A-210ENST00000635776 RHOHQ15669 191 aa3.49□□□□□ -1.85
SCN1A-210ENST00000635776 RNF182Q8N6D2 247 aa3.49□□□□□ -1.85
SCN1A-210ENST00000635776 TANC2Q9HCD6 1990 aa3.49□□□□□ -1.85
SCN1A-210ENST00000635776 INSP01308 110 aa3.49□□□□□ -1.85
SCN1A-210ENST00000635776 ATOH7Q8N100 152 aa3.49□□□□□ -1.85
SCN1A-210ENST00000635776 PSMG3-AS1Q96PY0 264 aa3.49□□□□□ -1.85
SCN1A-210ENST00000635776 SCGB1D4Q6XE38 83 aa3.49□□□□□ -1.85
SCN1A-210ENST00000635776 TMEM158Q8WZ71 300 aa3.49□□□□□ -1.85
SCN1A-210ENST00000635776 CENPFP49454 3210 aa3.49□□□□□ -1.85
SCN1A-210ENST00000635776 RNF223E7ERA6 249 aa3.49□□□□□ -1.85
SCN1A-210ENST00000635776 TFPI2P48307 235 aa3.48□□□□□ -1.85
SCN1A-210ENST00000635776 OR5A1Q8NGJ0 315 aa3.48□□□□□ -1.85
SCN1A-210ENST00000635776 HIGD1BQ9P298 99 aa3.48□□□□□ -1.85
SCN1A-210ENST00000635776 CHTOPQ9Y3Y2 248 aaKnown RBP3.48□□□□□ -1.85
SCN1A-210ENST00000635776 SMIM13P0DJ93 91 aa3.48□□□□□ -1.85
SCN1A-210ENST00000635776 SMAD5-AS1Q9Y6J3 95 aa3.48□□□□□ -1.85
SCN1A-210ENST00000635776 A0A1W2PPR1 153 aa3.48□□□□□ -1.85
SCN1A-210ENST00000635776 EVI2AP22794 236 aa3.48□□□□□ -1.85
SCN1A-210ENST00000635776 ANXA2RQ3ZCQ2 193 aa3.48□□□□□ -1.85
SCN1A-210ENST00000635776 YLPM1P49750 1951 aaKnown RBP3.48□□□□□ -1.85
SCN1A-210ENST00000635776 GAGE10A6NGK3 116 aa3.48□□□□□ -1.85
SCN1A-210ENST00000635776 J3KRW8 73 aa3.48□□□□□ -1.85
SCN1A-210ENST00000635776 TDRG1Q3Y452 100 aa3.48□□□□□ -1.85
SCN1A-210ENST00000635776 GDF5OSQ5U4N7 250 aa3.48□□□□□ -1.85
SCN1A-210ENST00000635776 C19orf54Q5BKX5 351 aa3.48□□□□□ -1.85
SCN1A-210ENST00000635776 C2orf66Q6UXQ4 117 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms