RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 IGFL4Q6B9Z1 124 aa9.3□□□□□ -0.92
SNX1-214ENST00000625244 PATE2Q6UY27 113 aa9.3□□□□□ -0.92
SNX1-214ENST00000625244 Q8N814 137 aa9.3□□□□□ -0.92
SNX1-214ENST00000625244 HSD17B11Q8NBQ5 300 aa9.3□□□□□ -0.92
SNX1-214ENST00000625244 LRRC20Q8TCA0 184 aa9.3□□□□□ -0.92
SNX1-214ENST00000625244 TMEM37Q8WXS4 190 aa9.3□□□□□ -0.92
SNX1-214ENST00000625244 MRPL32Q9BYC8 188 aaKnown RBP9.3□□□□□ -0.92
SNX1-214ENST00000625244 WFDC1Q9HC57 220 aa9.3□□□□□ -0.92
SNX1-214ENST00000625244 FAT4Q6V0I7 4981 aa9.3□□□□□ -0.92
SNX1-214ENST00000625244 BOLA2-SMG1P6H3BVE0 249 aa9.29□□□□□ -0.92
SNX1-214ENST00000625244 MT1HL1P0DM35 61 aa9.29□□□□□ -0.92
SNX1-214ENST00000625244 ST6GAL2Q96JF0 529 aa9.29□□□□□ -0.92
SNX1-214ENST00000625244 ARPC5LQ9BPX5 153 aa9.29□□□□□ -0.92
SNX1-214ENST00000625244 LY96Q9Y6Y9 160 aa9.29□□□□□ -0.92
SNX1-214ENST00000625244 A0A1W2PPV4 95 aa9.28□□□□□ -0.92
SNX1-214ENST00000625244 MBP02144 154 aa9.28□□□□□ -0.92
SNX1-214ENST00000625244 TAS2R45P59539 299 aa9.28□□□□□ -0.92
SNX1-214ENST00000625244 RHOBP62745 196 aa9.28□□□□□ -0.92
SNX1-214ENST00000625244 EIF5AP63241 154 aaKnown RBP9.28□□□□□ -0.92
SNX1-214ENST00000625244 KCNRGQ8N5I3 272 aa9.28□□□□□ -0.92
SNX1-214ENST00000625244 HYLS1Q96M11 299 aa9.28□□□□□ -0.92
SNX1-214ENST00000625244 LINC00467Q9BRT7 94 aa9.28□□□□□ -0.92
SNX1-214ENST00000625244 PSMG3Q9BT73 122 aaPredicted RBP9.28□□□□□ -0.92
SNX1-214ENST00000625244 ATP6V0CP27449 155 aa9.27□□□□□ -0.93
SNX1-214ENST00000625244 SERF2P84101 59 aa9.27□□□□□ -0.93
SNX1-214ENST00000625244 GUK1Q16774 197 aa9.27□□□□□ -0.93
SNX1-214ENST00000625244 RPL7L1Q6DKI1 246 aaKnown RBP9.27□□□□□ -0.93
SNX1-214ENST00000625244 LYPD5Q6UWN5 251 aa9.27□□□□□ -0.93
SNX1-214ENST00000625244 LCN15Q6UWW0 184 aa9.27□□□□□ -0.93
SNX1-214ENST00000625244 SCXQ7RTU7 201 aa9.27□□□□□ -0.93
SNX1-214ENST00000625244 RNF182Q8N6D2 247 aa9.27□□□□□ -0.93
SNX1-214ENST00000625244 FUT9Q9Y231 359 aa9.27□□□□□ -0.93
SNX1-214ENST00000625244 A0A087X0K7 114 aa9.26□□□□□ -0.93
SNX1-214ENST00000625244 TRAV8-2A0A0B4J237 113 aa9.26□□□□□ -0.93
SNX1-214ENST00000625244 CXCL2P19875 107 aa9.26□□□□□ -0.93
SNX1-214ENST00000625244 ZFP69Q49AA0 526 aa9.26□□□□□ -0.93
SNX1-214ENST00000625244 KHDC3LQ587J8 217 aa9.26□□□□□ -0.93
SNX1-214ENST00000625244 GCSAMLQ5JQS6 135 aa9.26□□□□□ -0.93
SNX1-214ENST00000625244 OR11H4Q8NGC9 324 aa9.26□□□□□ -0.93
SNX1-214ENST00000625244 OR2G3Q8NGZ4 309 aa9.26□□□□□ -0.93
SNX1-214ENST00000625244 SLC50A1Q9BRV3 221 aa9.26□□□□□ -0.93
SNX1-214ENST00000625244 ZNF471Q9BX82 626 aaPredicted RBP9.26□□□□□ -0.93
SNX1-214ENST00000625244 BCL2L11O43521 198 aa9.25□□□□□ -0.93
SNX1-214ENST00000625244 PSCAO43653 123 aa9.25□□□□□ -0.93
SNX1-214ENST00000625244 OR7C2O60412 319 aa9.25□□□□□ -0.93
SNX1-214ENST00000625244 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.25□□□□□ -0.93
SNX1-214ENST00000625244 Q6ZTI0 123 aa9.25□□□□□ -0.93
SNX1-214ENST00000625244 WFDC10BQ8IUB3 73 aa9.25□□□□□ -0.93
SNX1-214ENST00000625244 OR10G4Q8NGN3 311 aa9.25□□□□□ -0.93
SNX1-214ENST00000625244 OR10G9Q8NGN4 311 aa9.25□□□□□ -0.93
SNX1-214ENST00000625244 OR10G7Q8NGN6 311 aa9.25□□□□□ -0.93
SNX1-214ENST00000625244 TMEM14CQ9P0S9 112 aa9.25□□□□□ -0.93
SNX1-214ENST00000625244 ICOSQ9Y6W8 199 aa9.25□□□□□ -0.93
SNX1-214ENST00000625244 TRAV5A0A0B4J249 113 aa9.24□□□□□ -0.93
SNX1-214ENST00000625244 A0A1B0GVG6 124 aa9.24□□□□□ -0.93
SNX1-214ENST00000625244 H7BYZ3 331 aa9.24□□□□□ -0.93
SNX1-214ENST00000625244 K7EP13 123 aa9.24□□□□□ -0.93
SNX1-214ENST00000625244 PRB4P10163 310 aaPredicted RBP9.24□□□□□ -0.93
SNX1-214ENST00000625244 EVI2AP22794 236 aa9.24□□□□□ -0.93
SNX1-214ENST00000625244 HNRNPA3P51991 378 aaKnown RBP9.24□□□□□ -0.93
SNX1-214ENST00000625244 RAB2AP61019 212 aa9.24□□□□□ -0.93
SNX1-214ENST00000625244 AKR1C8PQ5T2L2 129 aa9.24□□□□□ -0.93
SNX1-214ENST00000625244 MORN5Q5VZ52 161 aa9.24□□□□□ -0.93
SNX1-214ENST00000625244 FAM122CQ6P4D5 195 aa9.24□□□□□ -0.93
SNX1-214ENST00000625244 TMUB2Q71RG4 321 aa9.24□□□□□ -0.93
SNX1-214ENST00000625244 MIR17HGQ75NE6 70 aa9.24□□□□□ -0.93
SNX1-214ENST00000625244 PAXXQ9BUH6 204 aa9.24□□□□□ -0.93
SNX1-214ENST00000625244 SH3BGRL3Q9H299 93 aa9.24□□□□□ -0.93
SNX1-214ENST00000625244 OR51M1Q9H341 326 aa9.24□□□□□ -0.93
SNX1-214ENST00000625244 KRTAP9-6A0A140TA67 174 aa9.23□□□□□ -0.93
SNX1-214ENST00000625244 IGLC2P0DOY2 106 aa9.23□□□□□ -0.93
SNX1-214ENST00000625244 HIST1H1EP10412 219 aaKnown RBP9.23□□□□□ -0.93
SNX1-214ENST00000625244 TPT1P13693 172 aaKnown RBP9.23□□□□□ -0.93
SNX1-214ENST00000625244 CDC34P49427 236 aaPredicted RBP9.23□□□□□ -0.93
SNX1-214ENST00000625244 HIST1H1AQ02539 215 aaPredicted RBP9.23□□□□□ -0.93
SNX1-214ENST00000625244 KIR3DS1Q14943 382 aa9.23□□□□□ -0.93
SNX1-214ENST00000625244 EIF5AL1Q6IS14 154 aaKnown RBP9.23□□□□□ -0.93
SNX1-214ENST00000625244 ZNF738Q8NE65 137 aa9.23□□□□□ -0.93
SNX1-214ENST00000625244 SLC25A2Q9BXI2 301 aa9.23□□□□□ -0.93
SNX1-214ENST00000625244 ACTR3CQ9C0K3 210 aaPredicted RBP9.23□□□□□ -0.93
SNX1-214ENST00000625244 AAMDCQ9H7C9 122 aa9.23□□□□□ -0.93
SNX1-214ENST00000625244 PPP1R14DQ9NXH3 145 aa9.23□□□□□ -0.93
SNX1-214ENST00000625244 SNURFLB1AK76 121 aa9.22□□□□□ -0.93
SNX1-214ENST00000625244 MRPS12O15235 138 aaKnown RBP9.22□□□□□ -0.93
SNX1-214ENST00000625244 RS1O15537 224 aa9.22□□□□□ -0.93
SNX1-214ENST00000625244 PAX4O43316 350 aa9.22□□□□□ -0.93
SNX1-214ENST00000625244 CRYGDP07320 174 aa9.22□□□□□ -0.93
SNX1-214ENST00000625244 UBE2L3P68036 154 aaKnown RBP9.22□□□□□ -0.93
SNX1-214ENST00000625244 PDE6HQ13956 83 aa9.22□□□□□ -0.93
SNX1-214ENST00000625244 PQLC2Q6ZP29 291 aa9.22□□□□□ -0.93
SNX1-214ENST00000625244 CCDC28AQ8IWP9 274 aa9.22□□□□□ -0.93
SNX1-214ENST00000625244 BLNKQ8WV28 456 aa9.22□□□□□ -0.93
SNX1-214ENST00000625244 ZNF331Q9NQX6 463 aaPredicted RBP9.22□□□□□ -0.93
SNX1-214ENST00000625244 CYTL1Q9NRR1 136 aa9.22□□□□□ -0.93
SNX1-214ENST00000625244 TRGV2A0A075B6R0 118 aa9.21□□□□□ -0.94
SNX1-214ENST00000625244 ZNF253O75346 499 aa9.21□□□□□ -0.94
SNX1-214ENST00000625244 ZNF324O75467 553 aaPredicted RBP9.21□□□□□ -0.94
SNX1-214ENST00000625244 SNRPCP09234 159 aaKnown RBP9.21□□□□□ -0.94
SNX1-214ENST00000625244 OR10J4P0C629 311 aa9.21□□□□□ -0.94
SNX1-214ENST00000625244 NBEAP1P0C6P0 100 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms