RNA–Protein interactions for RNA: ENST00000625216.2

PNKP-217, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 629 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-217ENST00000625216 VGLL1Q99990 258 aa9.25□□□□□ -0.93
PNKP-217ENST00000625216 PSG8Q9UQ74 426 aa9.25□□□□□ -0.93
PNKP-217ENST00000625216 F6UB75 175 aa9.24□□□□□ -0.93
PNKP-217ENST00000625216 M0R036 132 aa9.24□□□□□ -0.93
PNKP-217ENST00000625216 SCO1O75880 301 aa9.24□□□□□ -0.93
PNKP-217ENST00000625216 SNAPINO95295 136 aa9.24□□□□□ -0.93
PNKP-217ENST00000625216 LTAP01374 205 aa9.24□□□□□ -0.93
PNKP-217ENST00000625216 S100A9P06702 114 aaKnown RBP9.24□□□□□ -0.93
PNKP-217ENST00000625216 ID1P41134 155 aa9.24□□□□□ -0.93
PNKP-217ENST00000625216 PNRC1Q12796 327 aaPredicted RBP9.24□□□□□ -0.93
PNKP-217ENST00000625216 PRNTQ86SH4 94 aa9.24□□□□□ -0.93
PNKP-217ENST00000625216 STHQ8IWL8 128 aa9.24□□□□□ -0.93
PNKP-217ENST00000625216 OCC1Q8TAD7 63 aa9.24□□□□□ -0.93
PNKP-217ENST00000625216 Q8TAT8 98 aa9.24□□□□□ -0.93
PNKP-217ENST00000625216 LY96Q9Y6Y9 160 aa9.24□□□□□ -0.93
PNKP-217ENST00000625216 LYSTQ99698 3801 aa9.23□□□□□ -0.93
PNKP-217ENST00000625216 RBAKDNA6NC62 111 aa9.23□□□□□ -0.93
PNKP-217ENST00000625216 K7EQM0 130 aa9.23□□□□□ -0.93
PNKP-217ENST00000625216 ZNF705DP0CH99 300 aaPredicted RBP9.23□□□□□ -0.93
PNKP-217ENST00000625216 ZNF705BP0CI00 300 aaPredicted RBP9.23□□□□□ -0.93
PNKP-217ENST00000625216 PSMG4Q5JS54 123 aa9.23□□□□□ -0.93
PNKP-217ENST00000625216 BAGE2Q86Y30 109 aa9.23□□□□□ -0.93
PNKP-217ENST00000625216 ISOC2Q96AB3 205 aa9.23□□□□□ -0.93
PNKP-217ENST00000625216 AGRNO00468 2067 aa9.22□□□□□ -0.93
PNKP-217ENST00000625216 C7orf77A4D0Y5 90 aa9.22□□□□□ -0.93
PNKP-217ENST00000625216 CXorf65A6NEN9 183 aa9.22□□□□□ -0.93
PNKP-217ENST00000625216 NUPR2A6NF83 97 aa9.22□□□□□ -0.93
PNKP-217ENST00000625216 NPIPB6E9PJ23 425 aa9.22□□□□□ -0.93
PNKP-217ENST00000625216 CA1P00915 261 aaPredicted RBP9.22□□□□□ -0.93
PNKP-217ENST00000625216 OR5I1Q13606 314 aa9.22□□□□□ -0.93
PNKP-217ENST00000625216 GDF5OSQ5U4N7 250 aa9.22□□□□□ -0.93
PNKP-217ENST00000625216 MORN3Q6PF18 240 aaPredicted RBP9.22□□□□□ -0.93
PNKP-217ENST00000625216 C9orf47Q6ZRZ4 202 aa9.22□□□□□ -0.93
PNKP-217ENST00000625216 OR8A1Q8NGG7 326 aa9.22□□□□□ -0.93
PNKP-217ENST00000625216 C8orf49Q96NF6 230 aa9.22□□□□□ -0.93
PNKP-217ENST00000625216 MLST8Q9BVC4 326 aa9.22□□□□□ -0.93
PNKP-217ENST00000625216 AGPAT4-IT1Q9H0P7 198 aa9.22□□□□□ -0.93
PNKP-217ENST00000625216 GCGP01275 180 aa9.21□□□□□ -0.94
PNKP-217ENST00000625216 MGST1P10620 155 aaKnown RBP9.21□□□□□ -0.94
PNKP-217ENST00000625216 SNRPD3P62318 126 aaKnown RBP9.21□□□□□ -0.94
PNKP-217ENST00000625216 HIST1H1AQ02539 215 aaPredicted RBP9.21□□□□□ -0.94
PNKP-217ENST00000625216 RHEBQ15382 184 aa9.21□□□□□ -0.94
PNKP-217ENST00000625216 TRPT1Q86TN4 253 aaKnown RBP9.21□□□□□ -0.94
PNKP-217ENST00000625216 TMEM183AQ8IXX5 376 aa9.21□□□□□ -0.94
PNKP-217ENST00000625216 OR11H2Q8NH07 326 aa9.21□□□□□ -0.94
PNKP-217ENST00000625216 FBLL1A6NHQ2 334 aaKnown RBP9.2□□□□□ -0.94
PNKP-217ENST00000625216 RNF212Q495C1 297 aa9.2□□□□□ -0.94
PNKP-217ENST00000625216 CEMP1Q6PRD7 247 aaPredicted RBP9.2□□□□□ -0.94
PNKP-217ENST00000625216 SMIM12Q96EX1 92 aa9.2□□□□□ -0.94
PNKP-217ENST00000625216 ZC2HC1AQ96GY0 325 aa9.2□□□□□ -0.94
PNKP-217ENST00000625216 C11orf68Q9H3H3 251 aaKnown RBP9.2□□□□□ -0.94
PNKP-217ENST00000625216 RPS10P5Q9NQ39 176 aa9.2□□□□□ -0.94
PNKP-217ENST00000625216 ZNF492Q9P255 531 aa9.2□□□□□ -0.94
PNKP-217ENST00000625216 KLK5Q9Y337 293 aaPredicted RBP9.2□□□□□ -0.94
PNKP-217ENST00000625216 A0A0J9YX75 114 aa9.19□□□□□ -0.94
PNKP-217ENST00000625216 KNCNA6PVL3 124 aa9.19□□□□□ -0.94
PNKP-217ENST00000625216 B4DEV8 164 aa9.19□□□□□ -0.94
PNKP-217ENST00000625216 CT45A10P0DMU9 189 aa9.19□□□□□ -0.94
PNKP-217ENST00000625216 ZNF138P52744 262 aa9.19□□□□□ -0.94
PNKP-217ENST00000625216 TMEM78Q5T7P6 136 aa9.19□□□□□ -0.94
PNKP-217ENST00000625216 PRR27Q6MZM9 219 aa9.19□□□□□ -0.94
PNKP-217ENST00000625216 FOXI2Q6ZQN5 318 aa9.19□□□□□ -0.94
PNKP-217ENST00000625216 COX8CQ7Z4L0 72 aa9.19□□□□□ -0.94
PNKP-217ENST00000625216 OR10J6PQ8NGY7 276 aa9.19□□□□□ -0.94
PNKP-217ENST00000625216 ZFP30Q9Y2G7 519 aa9.19□□□□□ -0.94
PNKP-217ENST00000625216 HYDINQ4G0P3 5121 aa9.18□□□□□ -0.94
PNKP-217ENST00000625216 NUTF2P61970 127 aaKnown RBP9.18□□□□□ -0.94
PNKP-217ENST00000625216 ACTL10Q5JWF8 245 aa9.18□□□□□ -0.94
PNKP-217ENST00000625216 CBLN2Q8IUK8 224 aa9.18□□□□□ -0.94
PNKP-217ENST00000625216 SFRP2Q96HF1 295 aa9.18□□□□□ -0.94
PNKP-217ENST00000625216 FAM19A4Q96LR4 140 aa9.18□□□□□ -0.94
PNKP-217ENST00000625216 LINC00477Q96M19 166 aa9.18□□□□□ -0.94
PNKP-217ENST00000625216 RNASE7Q9H1E1 156 aaKnown RBP9.18□□□□□ -0.94
PNKP-217ENST00000625216 SAV1Q9H4B6 383 aaPredicted RBP9.18□□□□□ -0.94
PNKP-217ENST00000625216 PPP1R14DQ9NXH3 145 aa9.18□□□□□ -0.94
PNKP-217ENST00000625216 ALMS1Q8TCU4 4167 aa9.18□□□□□ -0.94
PNKP-217ENST00000625216 A0A087WWC5 75 aa9.17□□□□□ -0.94
PNKP-217ENST00000625216 C19orf71A6NCJ1 209 aa9.17□□□□□ -0.94
PNKP-217ENST00000625216 A8MTW9 85 aa9.17□□□□□ -0.94
PNKP-217ENST00000625216 GIG44P09565 113 aaPredicted RBP9.17□□□□□ -0.94
PNKP-217ENST00000625216 CRIP1P50238 77 aa9.17□□□□□ -0.94
PNKP-217ENST00000625216 ZNF80P51504 273 aaPredicted RBP9.17□□□□□ -0.94
PNKP-217ENST00000625216 SAPCD1Q5SSQ6 148 aa9.17□□□□□ -0.94
PNKP-217ENST00000625216 PRR9Q5T870 116 aa9.17□□□□□ -0.94
PNKP-217ENST00000625216 EBLN2Q6P2I7 272 aa9.17□□□□□ -0.94
PNKP-217ENST00000625216 TMEM88Q6PEY1 159 aa9.17□□□□□ -0.94
PNKP-217ENST00000625216 FAM231DQ6ZW35 169 aa9.17□□□□□ -0.94
PNKP-217ENST00000625216 ZFAND2AQ8N6M9 145 aa9.17□□□□□ -0.94
PNKP-217ENST00000625216 OR10G8Q8NGN5 311 aa9.17□□□□□ -0.94
PNKP-217ENST00000625216 C11orf45Q8TAV5 145 aa9.17□□□□□ -0.94
PNKP-217ENST00000625216 NDFIP1Q9BT67 221 aa9.17□□□□□ -0.94
PNKP-217ENST00000625216 C1QTNF4Q9BXJ3 329 aa9.17□□□□□ -0.94
PNKP-217ENST00000625216 OSTCQ9NRP0 149 aa9.17□□□□□ -0.94
PNKP-217ENST00000625216 H7BYZ3 331 aa9.16□□□□□ -0.94
PNKP-217ENST00000625216 MT-ND4LP03901 98 aa9.16□□□□□ -0.94
PNKP-217ENST00000625216 HLA-DRB4P13762 266 aa9.16□□□□□ -0.94
PNKP-217ENST00000625216 MIFP14174 115 aa9.16□□□□□ -0.94
PNKP-217ENST00000625216 IBA57Q5T440 356 aaKnown RBP9.16□□□□□ -0.94
PNKP-217ENST00000625216 PHLDA1Q8WV24 401 aaPredicted RBP9.16□□□□□ -0.94
PNKP-217ENST00000625216 ANAPC16Q96DE5 110 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms