RNA–Protein interactions for RNA: ENST00000620789.4

LITAF-220, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5 BASIC

Gene LITAF, Length 692 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-220ENST00000620789 CYB561D1Q8N8Q1 229 aa13.06□□□□□ -0.32
LITAF-220ENST00000620789 RNASE8Q8TDE3 154 aaKnown RBP13.06□□□□□ -0.32
LITAF-220ENST00000620789 ATG101Q9BSB4 218 aa13.06□□□□□ -0.32
LITAF-220ENST00000620789 DYNC2H1Q8NCM8 4307 aaKnown RBP13.06□□□□□ -0.32
LITAF-220ENST00000620789 LINC00467Q9BRT7 94 aa13.05□□□□□ -0.32
LITAF-220ENST00000620789 KLK5Q9Y337 293 aaPredicted RBP13.05□□□□□ -0.32
LITAF-220ENST00000620789 ARL2-SNX15V9GYD0 113 aa13.05□□□□□ -0.32
LITAF-220ENST00000620789 A0A1B0GV50 99 aa13.04□□□□□ -0.32
LITAF-220ENST00000620789 LYRM9A8MSI8 78 aa13.04□□□□□ -0.32
LITAF-220ENST00000620789 IFNA7P01567 189 aa13.04□□□□□ -0.32
LITAF-220ENST00000620789 SULT1A2P50226 295 aa13.04□□□□□ -0.32
LITAF-220ENST00000620789 SGK494Q96LW2 274 aa13.04□□□□□ -0.32
LITAF-220ENST00000620789 TRAV10A0A0B4J240 114 aa13.03□□□□□ -0.32
LITAF-220ENST00000620789 FBLL1A6NHQ2 334 aaKnown RBP13.03□□□□□ -0.32
LITAF-220ENST00000620789 Q6AWC8 147 aa13.03□□□□□ -0.32
LITAF-220ENST00000620789 Q6ZQT7 251 aa13.03□□□□□ -0.32
LITAF-220ENST00000620789 EIF4E3Q8N5X7 224 aaKnown RBP13.03□□□□□ -0.32
LITAF-220ENST00000620789 TMEM75Q8N9X5 138 aa13.03□□□□□ -0.32
LITAF-220ENST00000620789 TVP23CQ96ET8 276 aa13.03□□□□□ -0.32
LITAF-220ENST00000620789 PSG8Q9UQ74 426 aa13.03□□□□□ -0.32
LITAF-220ENST00000620789 TIMM8BQ9Y5J9 83 aaPredicted RBP13.03□□□□□ -0.32
LITAF-220ENST00000620789 PLECQ15149 4684 aaKnown RBP13.03□□□□□ -0.32
LITAF-220ENST00000620789 PEX7O00628 323 aa13.02□□□□□ -0.33
LITAF-220ENST00000620789 IGLV2-11P01706 119 aa13.02□□□□□ -0.33
LITAF-220ENST00000620789 NKX2-5P52952 324 aaPredicted RBP13.02□□□□□ -0.33
LITAF-220ENST00000620789 FLI1Q01543 452 aaPredicted RBP13.02□□□□□ -0.33
LITAF-220ENST00000620789 CST9LP1Q5W188 147 aa13.02□□□□□ -0.33
LITAF-220ENST00000620789 C2CD4CQ8TF44 421 aa13.02□□□□□ -0.33
LITAF-220ENST00000620789 HIST1H2BAQ96A08 127 aa13.02□□□□□ -0.33
LITAF-220ENST00000620789 NDFIP1Q9BT67 221 aa13.02□□□□□ -0.33
LITAF-220ENST00000620789 TREM1Q9NP99 234 aa13.02□□□□□ -0.33
LITAF-220ENST00000620789 IGHV1OR15-1A0A075B7D0 117 aa13.01□□□□□ -0.33
LITAF-220ENST00000620789 RGS13O14921 159 aa13.01□□□□□ -0.33
LITAF-220ENST00000620789 PAGE4O60829 102 aa13.01□□□□□ -0.33
LITAF-220ENST00000620789 PPT1P50897 306 aa13.01□□□□□ -0.33
LITAF-220ENST00000620789 DAD1P61803 113 aa13.01□□□□□ -0.33
LITAF-220ENST00000620789 ANXA2RQ3ZCQ2 193 aa13.01□□□□□ -0.33
LITAF-220ENST00000620789 ZNF680Q8NEM1 530 aa13.01□□□□□ -0.33
LITAF-220ENST00000620789 TCEAL7Q9BRU2 100 aa13.01□□□□□ -0.33
LITAF-220ENST00000620789 DEFB131BA0A096LNP1 70 aa13□□□□□ -0.33
LITAF-220ENST00000620789 TRAV1-1A0A0B4J248 108 aa13□□□□□ -0.33
LITAF-220ENST00000620789 CBY3A6NI87 242 aa13□□□□□ -0.33
LITAF-220ENST00000620789 SNURFLB1AK76 121 aa13□□□□□ -0.33
LITAF-220ENST00000620789 F6UZH7 168 aa13□□□□□ -0.33
LITAF-220ENST00000620789 ATP5G3P48201 142 aa13□□□□□ -0.33
LITAF-220ENST00000620789 PRNTQ86SH4 94 aa13□□□□□ -0.33
LITAF-220ENST00000620789 LINC00479Q96M42 142 aa13□□□□□ -0.33
LITAF-220ENST00000620789 NOP10Q9NPE3 64 aaKnown RBP13□□□□□ -0.33
LITAF-220ENST00000620789 TRAV34A0A0B4J273 112 aa12.99□□□□□ -0.33
LITAF-220ENST00000620789 TRAV21A0A0B4J279 112 aa12.98□□□□□ -0.33
LITAF-220ENST00000620789 TEX46H3BTG2 121 aa12.98□□□□□ -0.33
LITAF-220ENST00000620789 DEFB130BP0DP73 79 aa12.98□□□□□ -0.33
LITAF-220ENST00000620789 DEFB130AP0DP74 79 aa12.98□□□□□ -0.33
LITAF-220ENST00000620789 CCL20P78556 96 aa12.98□□□□□ -0.33
LITAF-220ENST00000620789 MUC21Q5SSG8 566 aa12.98□□□□□ -0.33
LITAF-220ENST00000620789 SAPCD1Q5SSQ6 148 aa12.98□□□□□ -0.33
LITAF-220ENST00000620789 C11orf72Q8NBR9 251 aa12.98□□□□□ -0.33
LITAF-220ENST00000620789 C8orf49Q96NF6 230 aa12.98□□□□□ -0.33
LITAF-220ENST00000620789 LYSTQ99698 3801 aa12.98□□□□□ -0.33
LITAF-220ENST00000620789 TP53TG3Q9ULZ0 132 aa12.98□□□□□ -0.33
LITAF-220ENST00000620789 LCE6AA0A183 80 aa12.97□□□□□ -0.33
LITAF-220ENST00000620789 IGLL5B9A064 214 aa12.97□□□□□ -0.33
LITAF-220ENST00000620789 DAZ2Q13117 558 aaKnown RBP12.97□□□□□ -0.33
LITAF-220ENST00000620789 IBA57Q5T440 356 aaKnown RBP12.97□□□□□ -0.33
LITAF-220ENST00000620789 FAM159AQ6UWV7 190 aa12.97□□□□□ -0.33
LITAF-220ENST00000620789 ALKAL2Q6UX46 152 aa12.97□□□□□ -0.33
LITAF-220ENST00000620789 Q86TA4 180 aa12.97□□□□□ -0.33
LITAF-220ENST00000620789 MANBALQ9NQG1 85 aa12.97□□□□□ -0.33
LITAF-220ENST00000620789 GSN-AS1Q9NRJ2 163 aa12.97□□□□□ -0.33
LITAF-220ENST00000620789 BOLA1Q9Y3E2 137 aa12.97□□□□□ -0.33
LITAF-220ENST00000620789 GCGP01275 180 aa12.96□□□□□ -0.33
LITAF-220ENST00000620789 TCL1AP56279 114 aa12.96□□□□□ -0.33
LITAF-220ENST00000620789 TCTAP57738 103 aa12.96□□□□□ -0.33
LITAF-220ENST00000620789 TDRG1Q3Y452 100 aa12.96□□□□□ -0.33
LITAF-220ENST00000620789 SMUG1Q53HV7 270 aa12.96□□□□□ -0.33
LITAF-220ENST00000620789 FMC1Q96HJ9 113 aa12.96□□□□□ -0.33
LITAF-220ENST00000620789 GNG13Q9P2W3 67 aa12.96□□□□□ -0.33
LITAF-220ENST00000620789 KLF12Q9Y4X4 402 aa12.96□□□□□ -0.33
LITAF-220ENST00000620789 HTN3P15516 51 aa12.95□□□□□ -0.34
LITAF-220ENST00000620789 ZNF80P51504 273 aaPredicted RBP12.95□□□□□ -0.34
LITAF-220ENST00000620789 UBE2G1P62253 170 aa12.95□□□□□ -0.34
LITAF-220ENST00000620789 LINC00612Q8N6U2 182 aa12.95□□□□□ -0.34
LITAF-220ENST00000620789 NAGKQ9UJ70 344 aa12.95□□□□□ -0.34
LITAF-220ENST00000620789 SACSQ9NZJ4 4579 aa12.95□□□□□ -0.34
LITAF-220ENST00000620789 IGHV4-4A0A075B6R2 117 aa12.94□□□□□ -0.34
LITAF-220ENST00000620789 AKR1C3P42330 323 aa12.94□□□□□ -0.34
LITAF-220ENST00000620789 ZNF415Q09FC8 603 aa12.94□□□□□ -0.34
LITAF-220ENST00000620789 TRGV11A0A075B6L2 103 aa12.93□□□□□ -0.34
LITAF-220ENST00000620789 TRBV6-1A0A0K0K1D8 114 aa12.93□□□□□ -0.34
LITAF-220ENST00000620789 SCO2A0A1W2PP80 73 aa12.93□□□□□ -0.34
LITAF-220ENST00000620789 PFN1P07737 140 aaKnown RBP12.93□□□□□ -0.34
LITAF-220ENST00000620789 TMEM183BQ1AE95 376 aa12.93□□□□□ -0.34
LITAF-220ENST00000620789 TMEM183AQ8IXX5 376 aa12.93□□□□□ -0.34
LITAF-220ENST00000620789 APLNQ9ULZ1 77 aa12.93□□□□□ -0.34
LITAF-220ENST00000620789 ZFP30Q9Y2G7 519 aa12.93□□□□□ -0.34
LITAF-220ENST00000620789 ALMS1Q8TCU4 4167 aa12.93□□□□□ -0.34
LITAF-220ENST00000620789 RYR3Q15413 4870 aa12.92□□□□□ -0.34
LITAF-220ENST00000620789 GAGE12BA1L429 117 aa12.92□□□□□ -0.34
LITAF-220ENST00000620789 GAGE7O76087 117 aa12.92□□□□□ -0.34
LITAF-220ENST00000620789 ATP5G1P05496 136 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms