RNA–Protein interactions for RNA: ENST00000617757.1

TARDBP-219, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 434 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-219ENST00000617757 KLLNB2CW77 178 aa5.93□□□□□ -1.46
TARDBP-219ENST00000617757 J3KRW8 73 aa5.93□□□□□ -1.46
TARDBP-219ENST00000617757 GPX1P07203 203 aa5.93□□□□□ -1.46
TARDBP-219ENST00000617757 LEPP41159 167 aa5.93□□□□□ -1.46
TARDBP-219ENST00000617757 CRIP1P50238 77 aa5.93□□□□□ -1.46
TARDBP-219ENST00000617757 ZNF80P51504 273 aaPredicted RBP5.93□□□□□ -1.46
TARDBP-219ENST00000617757 FXYD7P58549 80 aa5.93□□□□□ -1.46
TARDBP-219ENST00000617757 PNRC1Q12796 327 aaPredicted RBP5.93□□□□□ -1.46
TARDBP-219ENST00000617757 KIR3DS1Q14943 382 aa5.93□□□□□ -1.46
TARDBP-219ENST00000617757 SPINK13Q1W4C9 94 aa5.93□□□□□ -1.46
TARDBP-219ENST00000617757 LINC00322Q6ZN03 302 aaPredicted RBP5.93□□□□□ -1.46
TARDBP-219ENST00000617757 ZFAND2AQ8N6M9 145 aa5.93□□□□□ -1.46
TARDBP-219ENST00000617757 ISOC2Q96AB3 205 aa5.93□□□□□ -1.46
TARDBP-219ENST00000617757 SRD5A3Q9H8P0 318 aa5.93□□□□□ -1.46
TARDBP-219ENST00000617757 DNHD1Q96M86 4753 aa5.92□□□□□ -1.46
TARDBP-219ENST00000617757 TRAV12-2A0A075B6T6 113 aa5.92□□□□□ -1.46
TARDBP-219ENST00000617757 M0R036 132 aa5.92□□□□□ -1.46
TARDBP-219ENST00000617757 M0R2Z0 102 aa5.92□□□□□ -1.46
TARDBP-219ENST00000617757 CRXO43186 299 aaPredicted RBP5.92□□□□□ -1.46
TARDBP-219ENST00000617757 RPL35AP18077 110 aaKnown RBP5.92□□□□□ -1.46
TARDBP-219ENST00000617757 S100A1P23297 94 aa5.92□□□□□ -1.46
TARDBP-219ENST00000617757 TSPOP30536 169 aa5.92□□□□□ -1.46
TARDBP-219ENST00000617757 CDKN1BP46527 198 aa5.92□□□□□ -1.46
TARDBP-219ENST00000617757 BTN1A1Q13410 526 aa5.92□□□□□ -1.46
TARDBP-219ENST00000617757 KPRPQ5T749 579 aaPredicted RBP5.92□□□□□ -1.46
TARDBP-219ENST00000617757 PRR27Q6MZM9 219 aa5.92□□□□□ -1.46
TARDBP-219ENST00000617757 MORN3Q6PF18 240 aaPredicted RBP5.92□□□□□ -1.46
TARDBP-219ENST00000617757 SVBPQ8N300 66 aa5.92□□□□□ -1.46
TARDBP-219ENST00000617757 CLRN3Q8NCR9 226 aa5.92□□□□□ -1.46
TARDBP-219ENST00000617757 BIN3Q9NQY0 253 aa5.92□□□□□ -1.46
TARDBP-219ENST00000617757 C19orf71A6NCJ1 209 aa5.91□□□□□ -1.46
TARDBP-219ENST00000617757 FABP5P3A8MUU1 101 aa5.91□□□□□ -1.46
TARDBP-219ENST00000617757 B4DEV8 164 aa5.91□□□□□ -1.46
TARDBP-219ENST00000617757 J3QL48 77 aa5.91□□□□□ -1.46
TARDBP-219ENST00000617757 SH2D1AO60880 128 aa5.91□□□□□ -1.46
TARDBP-219ENST00000617757 SNAPINO95295 136 aa5.91□□□□□ -1.46
TARDBP-219ENST00000617757 RNASE4P34096 147 aaKnown RBP5.91□□□□□ -1.46
TARDBP-219ENST00000617757 NUTF2P61970 127 aaKnown RBP5.91□□□□□ -1.46
TARDBP-219ENST00000617757 IBA57Q5T440 356 aaKnown RBP5.91□□□□□ -1.46
TARDBP-219ENST00000617757 FAM162BQ5T6X4 162 aa5.91□□□□□ -1.46
TARDBP-219ENST00000617757 GFI1BQ5VTD9 330 aa5.91□□□□□ -1.46
TARDBP-219ENST00000617757 Q6AWC8 147 aa5.91□□□□□ -1.46
TARDBP-219ENST00000617757 Q6ZQT7 251 aa5.91□□□□□ -1.46
TARDBP-219ENST00000617757 FAM231DQ6ZW35 169 aa5.91□□□□□ -1.46
TARDBP-219ENST00000617757 NUDT10Q8NFP7 164 aa5.91□□□□□ -1.46
TARDBP-219ENST00000617757 NUDT11Q96G61 164 aa5.91□□□□□ -1.46
TARDBP-219ENST00000617757 SFRP2Q96HF1 295 aa5.91□□□□□ -1.46
TARDBP-219ENST00000617757 RNASE7Q9H1E1 156 aaKnown RBP5.91□□□□□ -1.46
TARDBP-219ENST00000617757 LOC102724200A0A096LPH7 203 aaPredicted RBP5.9□□□□□ -1.46
TARDBP-219ENST00000617757 TRAV12-3A0A0B4J271 114 aa5.9□□□□□ -1.46
TARDBP-219ENST00000617757 TRAV21A0A0B4J279 112 aa5.9□□□□□ -1.46
TARDBP-219ENST00000617757 C7orf77A4D0Y5 90 aa5.9□□□□□ -1.46
TARDBP-219ENST00000617757 C7orf71A4D174 169 aa5.9□□□□□ -1.46
TARDBP-219ENST00000617757 A8MZ25 164 aa5.9□□□□□ -1.46
TARDBP-219ENST00000617757 ZNF324O75467 553 aaPredicted RBP5.9□□□□□ -1.46
TARDBP-219ENST00000617757 AMBPP02760 352 aa5.9□□□□□ -1.46
TARDBP-219ENST00000617757 PFN1P07737 140 aaKnown RBP5.9□□□□□ -1.46
TARDBP-219ENST00000617757 GIG44P09565 113 aaPredicted RBP5.9□□□□□ -1.46
TARDBP-219ENST00000617757 IGHV4-30-4P0DP06 118 aa5.9□□□□□ -1.46
TARDBP-219ENST00000617757 ERVFC1-1P60608 527 aa5.9□□□□□ -1.46
TARDBP-219ENST00000617757 RNF212Q495C1 297 aa5.9□□□□□ -1.46
TARDBP-219ENST00000617757 LCE2CQ5TA81 110 aa5.9□□□□□ -1.46
TARDBP-219ENST00000617757 ATRAIDQ6UW56 229 aa5.9□□□□□ -1.46
TARDBP-219ENST00000617757 OR10G8Q8NGN5 311 aa5.9□□□□□ -1.46
TARDBP-219ENST00000617757 DAZAP1Q96EP5 407 aaKnown RBP5.9□□□□□ -1.46
TARDBP-219ENST00000617757 CSTL1Q9H114 145 aa5.9□□□□□ -1.46
TARDBP-219ENST00000617757 TUBA4BQ9H853 241 aa5.9□□□□□ -1.46
TARDBP-219ENST00000617757 OSTCQ9NRP0 149 aa5.9□□□□□ -1.46
TARDBP-219ENST00000617757 XCL2Q9UBD3 114 aa5.9□□□□□ -1.46
TARDBP-219ENST00000617757 NOTCH3Q9UM47 2321 aa5.9□□□□□ -1.47
TARDBP-219ENST00000617757 GATCO43716 136 aaKnown RBP5.89□□□□□ -1.47
TARDBP-219ENST00000617757 CA1P00915 261 aaPredicted RBP5.89□□□□□ -1.47
TARDBP-219ENST00000617757 P01737 135 aa5.89□□□□□ -1.47
TARDBP-219ENST00000617757 PRB2P02812 416 aaPredicted RBP5.89□□□□□ -1.47
TARDBP-219ENST00000617757 MT-ND4LP03901 98 aa5.89□□□□□ -1.47
TARDBP-219ENST00000617757 RBMY1A1P0DJD3 496 aaKnown RBP5.89□□□□□ -1.47
TARDBP-219ENST00000617757 RBMY1CP0DJD4 496 aa5.89□□□□□ -1.47
TARDBP-219ENST00000617757 RHEBQ15382 184 aa5.89□□□□□ -1.47
TARDBP-219ENST00000617757 RBMY1FQ15415 496 aaKnown RBP5.89□□□□□ -1.47
TARDBP-219ENST00000617757 C15orf54Q8N8G6 183 aa5.89□□□□□ -1.47
TARDBP-219ENST00000617757 ANAPC16Q96DE5 110 aa5.89□□□□□ -1.47
TARDBP-219ENST00000617757 C20orf144Q9BQM9 153 aa5.89□□□□□ -1.47
TARDBP-219ENST00000617757 C1QTNF4Q9BXJ3 329 aa5.89□□□□□ -1.47
TARDBP-219ENST00000617757 C11orf21Q9P2W6 132 aa5.89□□□□□ -1.47
TARDBP-219ENST00000617757 V9GYV3 84 aa5.89□□□□□ -1.47
TARDBP-219ENST00000617757 IGKV3D-20A0A0C4DH25 116 aa5.88□□□□□ -1.47
TARDBP-219ENST00000617757 KIR2DL5BA0A0G2JN68 375 aa5.88□□□□□ -1.47
TARDBP-219ENST00000617757 KIR2DL5BA0A0G2JPC4 375 aa5.88□□□□□ -1.47
TARDBP-219ENST00000617757 ZNF705GA8MUZ8 300 aaPredicted RBP5.88□□□□□ -1.47
TARDBP-219ENST00000617757 PPP1R2P9O14990 202 aa5.88□□□□□ -1.47
TARDBP-219ENST00000617757 INSP01308 110 aa5.88□□□□□ -1.47
TARDBP-219ENST00000617757 ORM1P02763 201 aa5.88□□□□□ -1.47
TARDBP-219ENST00000617757 APOC4P55056 127 aa5.88□□□□□ -1.47
TARDBP-219ENST00000617757 RPL19P84098 196 aaKnown RBP5.88□□□□□ -1.47
TARDBP-219ENST00000617757 LINC01559Q495D7 138 aa5.88□□□□□ -1.47
TARDBP-219ENST00000617757 ZNF575Q86XF7 245 aa5.88□□□□□ -1.47
TARDBP-219ENST00000617757 KIR2DL5AQ8N109 375 aa5.88□□□□□ -1.47
TARDBP-219ENST00000617757 C1orf158Q8N1D5 194 aa5.88□□□□□ -1.47
TARDBP-219ENST00000617757 CSNK1G2-AS1Q8NCQ2 148 aa5.88□□□□□ -1.47
TARDBP-219ENST00000617757 KIR2DL5BQ8NHK3 375 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms