RNA–Protein interactions for RNA: ENST00000616944.4

CBWD1-225, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-225ENST00000616944 B4DEV8 164 aa11.18□□□□□ -0.62
CBWD1-225ENST00000616944 M0R036 132 aa11.18□□□□□ -0.62
CBWD1-225ENST00000616944 ZNF80P51504 273 aaPredicted RBP11.18□□□□□ -0.62
CBWD1-225ENST00000616944 SAMD5Q5TGI4 173 aa11.18□□□□□ -0.62
CBWD1-225ENST00000616944 TRPT1Q86TN4 253 aaKnown RBP11.18□□□□□ -0.62
CBWD1-225ENST00000616944 C19orf71A6NCJ1 209 aa11.17□□□□□ -0.62
CBWD1-225ENST00000616944 IGKV3-20P01619 116 aa11.17□□□□□ -0.62
CBWD1-225ENST00000616944 KRTAP10-11P60412 298 aa11.17□□□□□ -0.62
CBWD1-225ENST00000616944 KIR3DS1Q14943 382 aa11.17□□□□□ -0.62
CBWD1-225ENST00000616944 RHEBQ15382 184 aa11.17□□□□□ -0.62
CBWD1-225ENST00000616944 SMUG1Q53HV7 270 aa11.17□□□□□ -0.62
CBWD1-225ENST00000616944 SFRP2Q96HF1 295 aa11.17□□□□□ -0.62
CBWD1-225ENST00000616944 C7orf77A4D0Y5 90 aa11.17□□□□□ -0.62
CBWD1-225ENST00000616944 G3V4G9 280 aa11.17□□□□□ -0.62
CBWD1-225ENST00000616944 PRR27Q6MZM9 219 aa11.17□□□□□ -0.62
CBWD1-225ENST00000616944 FAM231DQ6ZW35 169 aa11.17□□□□□ -0.62
CBWD1-225ENST00000616944 RNF212Q495C1 297 aa11.16□□□□□ -0.62
CBWD1-225ENST00000616944 STHQ8IWL8 128 aa11.16□□□□□ -0.62
CBWD1-225ENST00000616944 DEFB125Q8N687 156 aa11.16□□□□□ -0.62
CBWD1-225ENST00000616944 RNASE7Q9H1E1 156 aaKnown RBP11.16□□□□□ -0.62
CBWD1-225ENST00000616944 BIN3Q9NQY0 253 aa11.16□□□□□ -0.62
CBWD1-225ENST00000616944 A0A087WWC5 75 aa11.15□□□□□ -0.62
CBWD1-225ENST00000616944 M0R2Z0 102 aa11.15□□□□□ -0.62
CBWD1-225ENST00000616944 LEPP41159 167 aa11.15□□□□□ -0.62
CBWD1-225ENST00000616944 CDKN1BP46527 198 aa11.15□□□□□ -0.62
CBWD1-225ENST00000616944 SPINK13Q1W4C9 94 aa11.15□□□□□ -0.62
CBWD1-225ENST00000616944 IBA57Q5T440 356 aaKnown RBP11.15□□□□□ -0.62
CBWD1-225ENST00000616944 FAM162BQ5T6X4 162 aa11.15□□□□□ -0.62
CBWD1-225ENST00000616944 Q6AWC8 147 aa11.15□□□□□ -0.62
CBWD1-225ENST00000616944 OSTCQ9NRP0 149 aa11.15□□□□□ -0.62
CBWD1-225ENST00000616944 CRXO43186 299 aaPredicted RBP11.14□□□□□ -0.63
CBWD1-225ENST00000616944 SH2D1AO60880 128 aa11.14□□□□□ -0.63
CBWD1-225ENST00000616944 PFN1P07737 140 aaKnown RBP11.14□□□□□ -0.63
CBWD1-225ENST00000616944 ERVFC1-1P60608 527 aa11.14□□□□□ -0.63
CBWD1-225ENST00000616944 NUDT10Q8NFP7 164 aa11.14□□□□□ -0.63
CBWD1-225ENST00000616944 NUDT11Q96G61 164 aa11.14□□□□□ -0.63
CBWD1-225ENST00000616944 GPX1P07203 203 aa11.13□□□□□ -0.63
CBWD1-225ENST00000616944 TSPOP30536 169 aa11.13□□□□□ -0.63
CBWD1-225ENST00000616944 BTN1A1Q13410 526 aa11.13□□□□□ -0.63
CBWD1-225ENST00000616944 GFI1BQ5VTD9 330 aa11.13□□□□□ -0.63
CBWD1-225ENST00000616944 Q6ZQT7 251 aa11.13□□□□□ -0.63
CBWD1-225ENST00000616944 ZMAT5Q9UDW3 170 aaKnown RBP11.13□□□□□ -0.63
CBWD1-225ENST00000616944 V9GYV3 84 aa11.13□□□□□ -0.63
CBWD1-225ENST00000616944 J3KRW8 73 aa11.13□□□□□ -0.63
CBWD1-225ENST00000616944 MT-ND4LP03901 98 aa11.13□□□□□ -0.63
CBWD1-225ENST00000616944 OR10G8Q8NGN5 311 aa11.13□□□□□ -0.63
CBWD1-225ENST00000616944 ANAPC16Q96DE5 110 aa11.13□□□□□ -0.63
CBWD1-225ENST00000616944 RPS10P5Q9NQ39 176 aa11.13□□□□□ -0.63
CBWD1-225ENST00000616944 TMEM242Q9NWH2 141 aa11.13□□□□□ -0.63
CBWD1-225ENST00000616944 C11orf21Q9P2W6 132 aa11.13□□□□□ -0.63
CBWD1-225ENST00000616944 TRAV12-2A0A075B6T6 113 aa11.12□□□□□ -0.63
CBWD1-225ENST00000616944 C7orf71A4D174 169 aa11.12□□□□□ -0.63
CBWD1-225ENST00000616944 FABP5P3A8MUU1 101 aa11.12□□□□□ -0.63
CBWD1-225ENST00000616944 ZNF324O75467 553 aaPredicted RBP11.12□□□□□ -0.63
CBWD1-225ENST00000616944 ZNF575Q86XF7 245 aa11.12□□□□□ -0.63
CBWD1-225ENST00000616944 C15orf54Q8N8G6 183 aa11.12□□□□□ -0.63
CBWD1-225ENST00000616944 CTDSP1Q9GZU7 261 aa11.12□□□□□ -0.63
CBWD1-225ENST00000616944 NBEAL2Q6ZNJ1 2754 aa11.11□□□□□ -0.63
CBWD1-225ENST00000616944 P01737 135 aa11.11□□□□□ -0.63
CBWD1-225ENST00000616944 GIG44P09565 113 aaPredicted RBP11.11□□□□□ -0.63
CBWD1-225ENST00000616944 RNASE4P34096 147 aaKnown RBP11.11□□□□□ -0.63
CBWD1-225ENST00000616944 FXYD7P58549 80 aa11.11□□□□□ -0.63
CBWD1-225ENST00000616944 KPRPQ5T749 579 aaPredicted RBP11.11□□□□□ -0.63
CBWD1-225ENST00000616944 SRD5A3Q9H8P0 318 aa11.11□□□□□ -0.63
CBWD1-225ENST00000616944 TRAV21A0A0B4J279 112 aa11.1□□□□□ -0.63
CBWD1-225ENST00000616944 PPP1R2P9O14990 202 aa11.1□□□□□ -0.63
CBWD1-225ENST00000616944 RBMY1A1P0DJD3 496 aaKnown RBP11.1□□□□□ -0.63
CBWD1-225ENST00000616944 RBMY1CP0DJD4 496 aa11.1□□□□□ -0.63
CBWD1-225ENST00000616944 RBMY1FQ15415 496 aaKnown RBP11.1□□□□□ -0.63
CBWD1-225ENST00000616944 CT83Q5H943 113 aa11.1□□□□□ -0.63
CBWD1-225ENST00000616944 DAZAP1Q96EP5 407 aaKnown RBP11.1□□□□□ -0.63
CBWD1-225ENST00000616944 RPP21Q9H633 154 aaKnown RBP11.1□□□□□ -0.63
CBWD1-225ENST00000616944 ZNF705GA8MUZ8 300 aaPredicted RBP11.09□□□□□ -0.63
CBWD1-225ENST00000616944 H7BYZ3 331 aa11.09□□□□□ -0.63
CBWD1-225ENST00000616944 SCO1O75880 301 aa11.09□□□□□ -0.63
CBWD1-225ENST00000616944 RPL35AP18077 110 aaKnown RBP11.09□□□□□ -0.63
CBWD1-225ENST00000616944 NUTF2P61970 127 aaKnown RBP11.09□□□□□ -0.63
CBWD1-225ENST00000616944 LINC01559Q495D7 138 aa11.09□□□□□ -0.63
CBWD1-225ENST00000616944 MORN3Q6PF18 240 aaPredicted RBP11.09□□□□□ -0.63
CBWD1-225ENST00000616944 TRAV12-3A0A0B4J271 114 aa11.09□□□□□ -0.63
CBWD1-225ENST00000616944 IGKV3D-20A0A0C4DH25 116 aa11.09□□□□□ -0.63
CBWD1-225ENST00000616944 GATCO43716 136 aaKnown RBP11.09□□□□□ -0.63
CBWD1-225ENST00000616944 CA1P00915 261 aaPredicted RBP11.09□□□□□ -0.63
CBWD1-225ENST00000616944 AMBPP02760 352 aa11.09□□□□□ -0.63
CBWD1-225ENST00000616944 RPL19P84098 196 aaKnown RBP11.09□□□□□ -0.63
CBWD1-225ENST00000616944 IGHV4-30-4P0DP06 118 aa11.08□□□□□ -0.64
CBWD1-225ENST00000616944 OR2D3Q8NGH3 330 aa11.08□□□□□ -0.64
CBWD1-225ENST00000616944 C20orf144Q9BQM9 153 aa11.08□□□□□ -0.64
CBWD1-225ENST00000616944 CXorf65A6NEN9 183 aa11.07□□□□□ -0.64
CBWD1-225ENST00000616944 A8MZ25 164 aa11.07□□□□□ -0.64
CBWD1-225ENST00000616944 TDRG1Q3Y452 100 aa11.07□□□□□ -0.64
CBWD1-225ENST00000616944 CBLN2Q8IUK8 224 aa11.07□□□□□ -0.64
CBWD1-225ENST00000616944 CSNK1G2-AS1Q8NCQ2 148 aa11.07□□□□□ -0.64
CBWD1-225ENST00000616944 XCL2Q9UBD3 114 aa11.07□□□□□ -0.64
CBWD1-225ENST00000616944 SMIM27A0A1W2PRY6 76 aa11.06□□□□□ -0.64
CBWD1-225ENST00000616944 INSP01308 110 aa11.06□□□□□ -0.64
CBWD1-225ENST00000616944 ORM1P02763 201 aa11.06□□□□□ -0.64
CBWD1-225ENST00000616944 TMEM88Q6PEY1 159 aa11.06□□□□□ -0.64
CBWD1-225ENST00000616944 TSKUQ8WUA8 353 aa11.06□□□□□ -0.64
CBWD1-225ENST00000616944 IMMP2LQ96T52 175 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms