RNA–Protein interactions for RNA: ENST00000612050.4

CBWD3-208, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,440 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-208ENST00000612050 DAZ2Q13117 558 aaKnown RBP8.73□□□□□ -1.01
CBWD3-208ENST00000612050 OR5I1Q13606 314 aa8.73□□□□□ -1.01
CBWD3-208ENST00000612050 RNF212Q495C1 297 aa8.73□□□□□ -1.01
CBWD3-208ENST00000612050 ZFP69Q49AA0 526 aa8.73□□□□□ -1.01
CBWD3-208ENST00000612050 Q5BKY6 102 aa8.73□□□□□ -1.01
CBWD3-208ENST00000612050 IBA57Q5T440 356 aaKnown RBP8.73□□□□□ -1.01
CBWD3-208ENST00000612050 RPL7L1Q6DKI1 246 aaKnown RBP8.73□□□□□ -1.01
CBWD3-208ENST00000612050 Q8TAT8 98 aa8.73□□□□□ -1.01
CBWD3-208ENST00000612050 ST6GAL2Q96JF0 529 aa8.73□□□□□ -1.01
CBWD3-208ENST00000612050 RYR3Q15413 4870 aa8.72□□□□□ -1.01
CBWD3-208ENST00000612050 FBLL1A6NHQ2 334 aaKnown RBP8.72□□□□□ -1.01
CBWD3-208ENST00000612050 GCHFRP30047 84 aa8.72□□□□□ -1.01
CBWD3-208ENST00000612050 CCL18P55774 89 aa8.72□□□□□ -1.01
CBWD3-208ENST00000612050 EIF5AP63241 154 aaKnown RBP8.72□□□□□ -1.01
CBWD3-208ENST00000612050 GOLT1AQ6ZVE7 132 aa8.72□□□□□ -1.01
CBWD3-208ENST00000612050 C5orf17Q8NAS9 161 aa8.72□□□□□ -1.01
CBWD3-208ENST00000612050 STOML3Q8TAV4 291 aa8.72□□□□□ -1.01
CBWD3-208ENST00000612050 SH3BGRL3Q9H299 93 aa8.72□□□□□ -1.01
CBWD3-208ENST00000612050 ALMS1Q8TCU4 4167 aa8.72□□□□□ -1.01
CBWD3-208ENST00000612050 TRGV11A0A075B6L2 103 aa8.71□□□□□ -1.01
CBWD3-208ENST00000612050 TRGV1A0A0A0MS02 117 aa8.71□□□□□ -1.01
CBWD3-208ENST00000612050 CTXND1A0A1B0GTU2 59 aa8.71□□□□□ -1.01
CBWD3-208ENST00000612050 KANTRA0A1W2PQU2 76 aa8.71□□□□□ -1.01
CBWD3-208ENST00000612050 ZNF324O75467 553 aaPredicted RBP8.71□□□□□ -1.01
CBWD3-208ENST00000612050 FAM3BP58499 235 aaPredicted RBP8.71□□□□□ -1.01
CBWD3-208ENST00000612050 ZFAND2AQ8N6M9 145 aa8.71□□□□□ -1.01
CBWD3-208ENST00000612050 NKX6-2Q9C056 277 aaPredicted RBP8.71□□□□□ -1.01
CBWD3-208ENST00000612050 TREM1Q9NP99 234 aa8.71□□□□□ -1.01
CBWD3-208ENST00000612050 GSN-AS1Q9NRJ2 163 aa8.71□□□□□ -1.01
CBWD3-208ENST00000612050 TRAV21A0A0B4J279 112 aa8.71□□□□□ -1.02
CBWD3-208ENST00000612050 EIF3GO75821 320 aaKnown RBP eCLIP8.71□□□□□ -1.02
CBWD3-208ENST00000612050 PPT1P50897 306 aa8.71□□□□□ -1.02
CBWD3-208ENST00000612050 TCL1AP56279 114 aa8.71□□□□□ -1.02
CBWD3-208ENST00000612050 ZNF345Q14585 488 aa8.71□□□□□ -1.02
CBWD3-208ENST00000612050 NAGKQ9UJ70 344 aa8.71□□□□□ -1.02
CBWD3-208ENST00000612050 A0A0D9SG52 128 aa8.7□□□□□ -1.02
CBWD3-208ENST00000612050 IFNA7P01567 189 aa8.7□□□□□ -1.02
CBWD3-208ENST00000612050 SUMO1P63165 101 aaKnown RBP8.7□□□□□ -1.02
CBWD3-208ENST00000612050 LGALS9BQ3B8N2 356 aa8.7□□□□□ -1.02
CBWD3-208ENST00000612050 SOHLH1Q5JUK2 328 aa8.7□□□□□ -1.02
CBWD3-208ENST00000612050 MUC21Q5SSG8 566 aa8.7□□□□□ -1.02
CBWD3-208ENST00000612050 KCNS1Q96KK3 526 aa8.7□□□□□ -1.02
CBWD3-208ENST00000612050 A0A1W2PRE2 83 aa8.69□□□□□ -1.02
CBWD3-208ENST00000612050 F6UZH7 168 aa8.69□□□□□ -1.02
CBWD3-208ENST00000612050 PFDN1O60925 122 aa8.69□□□□□ -1.02
CBWD3-208ENST00000612050 SLAQ13239 276 aa8.69□□□□□ -1.02
CBWD3-208ENST00000612050 Q6AWC8 147 aa8.69□□□□□ -1.02
CBWD3-208ENST00000612050 Q6ZTI0 123 aa8.69□□□□□ -1.02
CBWD3-208ENST00000612050 LINC00612Q8N6U2 182 aa8.69□□□□□ -1.02
CBWD3-208ENST00000612050 SPXQ9BT56 116 aa8.69□□□□□ -1.02
CBWD3-208ENST00000612050 RYR2Q92736 4967 aa8.68□□□□□ -1.02
CBWD3-208ENST00000612050 TRAV26-1A0A087WT03 109 aa8.68□□□□□ -1.02
CBWD3-208ENST00000612050 HMSDA8MTL9 139 aa8.68□□□□□ -1.02
CBWD3-208ENST00000612050 TCRAP04437 139 aa8.68□□□□□ -1.02
CBWD3-208ENST00000612050 GNG5P63218 68 aa8.68□□□□□ -1.02
CBWD3-208ENST00000612050 SAPCD1Q5SSQ6 148 aa8.68□□□□□ -1.02
CBWD3-208ENST00000612050 SSX7Q7RTT5 188 aa8.68□□□□□ -1.02
CBWD3-208ENST00000612050 CYB561D1Q8N8Q1 229 aa8.68□□□□□ -1.02
CBWD3-208ENST00000612050 C11orf72Q8NBR9 251 aa8.68□□□□□ -1.02
CBWD3-208ENST00000612050 SUN5Q8TC36 379 aa8.68□□□□□ -1.02
CBWD3-208ENST00000612050 C18orf15Q96N68 181 aa8.68□□□□□ -1.02
CBWD3-208ENST00000612050 ZNF471Q9BX82 626 aaPredicted RBP8.68□□□□□ -1.02
CBWD3-208ENST00000612050 SDF2L1Q9HCN8 221 aa8.68□□□□□ -1.02
CBWD3-208ENST00000612050 KLF12Q9Y4X4 402 aa8.68□□□□□ -1.02
CBWD3-208ENST00000612050 SACSQ9NZJ4 4579 aa8.68□□□□□ -1.02
CBWD3-208ENST00000612050 UMAD1C9J7I0 102 aa8.67□□□□□ -1.02
CBWD3-208ENST00000612050 H3BNG1 76 aa8.67□□□□□ -1.02
CBWD3-208ENST00000612050 SPINK4O60575 86 aa8.67□□□□□ -1.02
CBWD3-208ENST00000612050 TMEM183BQ1AE95 376 aa8.67□□□□□ -1.02
CBWD3-208ENST00000612050 SMUG1Q53HV7 270 aa8.67□□□□□ -1.02
CBWD3-208ENST00000612050 PRR9Q5T870 116 aa8.67□□□□□ -1.02
CBWD3-208ENST00000612050 LINC00336Q6ZUF6 198 aa8.67□□□□□ -1.02
CBWD3-208ENST00000612050 TMEM183AQ8IXX5 376 aa8.67□□□□□ -1.02
CBWD3-208ENST00000612050 KCNRGQ8N5I3 272 aa8.67□□□□□ -1.02
CBWD3-208ENST00000612050 TMEM75Q8N9X5 138 aa8.67□□□□□ -1.02
CBWD3-208ENST00000612050 TMPRSS5Q9H3S3 457 aa8.67□□□□□ -1.02
CBWD3-208ENST00000612050 EPDR1Q9UM22 224 aa8.67□□□□□ -1.02
CBWD3-208ENST00000612050 A0A0J9YY99 117 aa8.66□□□□□ -1.02
CBWD3-208ENST00000612050 MAP1LC3B2A6NCE7 125 aa8.66□□□□□ -1.02
CBWD3-208ENST00000612050 SMLR1H3BR10 107 aa8.66□□□□□ -1.02
CBWD3-208ENST00000612050 FLI1Q01543 452 aaPredicted RBP8.66□□□□□ -1.02
CBWD3-208ENST00000612050 MAP1LC3BQ9GZQ8 125 aa8.66□□□□□ -1.02
CBWD3-208ENST00000612050 TP53TG3Q9ULZ0 132 aa8.66□□□□□ -1.02
CBWD3-208ENST00000612050 PSG8Q9UQ74 426 aa8.66□□□□□ -1.02
CBWD3-208ENST00000612050 IGLV2-18A0A075B6J9 118 aa8.65□□□□□ -1.02
CBWD3-208ENST00000612050 TRAV8-1A0A0A6YYK1 113 aa8.65□□□□□ -1.02
CBWD3-208ENST00000612050 TRGV4A0A0C4DH28 118 aa8.65□□□□□ -1.02
CBWD3-208ENST00000612050 M0R2N4 97 aa8.65□□□□□ -1.02
CBWD3-208ENST00000612050 BCL2L11O43521 198 aa8.65□□□□□ -1.02
CBWD3-208ENST00000612050 SEC11BP0C7V7 166 aa8.65□□□□□ -1.02
CBWD3-208ENST00000612050 UBE2G2P60604 165 aa8.65□□□□□ -1.02
CBWD3-208ENST00000612050 EIF5AL1Q6IS14 154 aaKnown RBP8.65□□□□□ -1.02
CBWD3-208ENST00000612050 PRNTQ86SH4 94 aa8.65□□□□□ -1.02
CBWD3-208ENST00000612050 HIST1H2BAQ96A08 127 aa8.65□□□□□ -1.02
CBWD3-208ENST00000612050 TCEAL7Q9BRU2 100 aa8.65□□□□□ -1.02
CBWD3-208ENST00000612050 MRPL16Q9NX20 251 aaKnown RBP8.65□□□□□ -1.02
CBWD3-208ENST00000612050 GGTLC3B5MD39 225 aa8.64□□□□□ -1.03
CBWD3-208ENST00000612050 G3V3Q6 166 aa8.64□□□□□ -1.03
CBWD3-208ENST00000612050 TEX46H3BTG2 121 aa8.64□□□□□ -1.03
CBWD3-208ENST00000612050 PAX4O43316 350 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms