RNA–Protein interactions for RNA: ENST00000608440.5

CTCFL-218, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-218ENST00000608440 KLK15Q9H2R5 256 aa9.82□□□□□ -0.84
CTCFL-218ENST00000608440 F5H768 121 aa9.81□□□□□ -0.84
CTCFL-218ENST00000608440 CEMP1Q6PRD7 247 aaPredicted RBP9.81□□□□□ -0.84
CTCFL-218ENST00000608440 ASCL5Q7RTU5 278 aa9.81□□□□□ -0.84
CTCFL-218ENST00000608440 MDP1Q86V88 176 aa9.81□□□□□ -0.84
CTCFL-218ENST00000608440 NXT2Q9NPJ8 142 aaKnown RBP9.81□□□□□ -0.84
CTCFL-218ENST00000608440 RPUSD1Q9UJJ7 312 aaKnown RBP9.81□□□□□ -0.84
CTCFL-218ENST00000608440 ZFHX4Q86UP3 3567 aa9.81□□□□□ -0.84
CTCFL-218ENST00000608440 TRGV11A0A075B6L2 103 aa9.81□□□□□ -0.84
CTCFL-218ENST00000608440 LINC01619G3V211 115 aa9.81□□□□□ -0.84
CTCFL-218ENST00000608440 TIMM23O14925 209 aa9.81□□□□□ -0.84
CTCFL-218ENST00000608440 MRPS12O15235 138 aaKnown RBP9.81□□□□□ -0.84
CTCFL-218ENST00000608440 CFC1BP0CG36 223 aa9.81□□□□□ -0.84
CTCFL-218ENST00000608440 CFC1P0CG37 223 aa9.81□□□□□ -0.84
CTCFL-218ENST00000608440 SLC25A16P16260 332 aa9.81□□□□□ -0.84
CTCFL-218ENST00000608440 PLNP26678 52 aa9.81□□□□□ -0.84
CTCFL-218ENST00000608440 MZT1Q08AG7 82 aa9.81□□□□□ -0.84
CTCFL-218ENST00000608440 IGHV3OR15-7A0A075B7D8 119 aa9.8□□□□□ -0.84
CTCFL-218ENST00000608440 RBAKDNA6NC62 111 aa9.8□□□□□ -0.84
CTCFL-218ENST00000608440 M0R3E3 92 aa9.8□□□□□ -0.84
CTCFL-218ENST00000608440 IGHV4-39P01824 125 aa9.8□□□□□ -0.84
CTCFL-218ENST00000608440 APELAP0DMC3 54 aa9.8□□□□□ -0.84
CTCFL-218ENST00000608440 WT1-ASQ06250 92 aa9.8□□□□□ -0.84
CTCFL-218ENST00000608440 RNF185Q96GF1 192 aa9.8□□□□□ -0.84
CTCFL-218ENST00000608440 OR13C6PQ8NH95 151 aa9.8□□□□□ -0.84
CTCFL-218ENST00000608440 LYZP61626 148 aa9.79□□□□□ -0.84
CTCFL-218ENST00000608440 LRRC75A-AS1Q8N1F1 130 aa9.79□□□□□ -0.84
CTCFL-218ENST00000608440 ZNRF1Q8ND25 227 aa9.79□□□□□ -0.84
CTCFL-218ENST00000608440 TM4SF5O14894 197 aa9.79□□□□□ -0.84
CTCFL-218ENST00000608440 SH2D1AO60880 128 aa9.79□□□□□ -0.84
CTCFL-218ENST00000608440 CECR9P0C854 216 aa9.79□□□□□ -0.84
CTCFL-218ENST00000608440 HCP5Q6MZN7 132 aa9.79□□□□□ -0.84
CTCFL-218ENST00000608440 ZNF71Q9NQZ8 489 aaPredicted RBP9.79□□□□□ -0.84
CTCFL-218ENST00000608440 BEX4Q9NWD9 120 aaPredicted RBP9.79□□□□□ -0.84
CTCFL-218ENST00000608440 BOD1L1Q8NFC6 3051 aa9.79□□□□□ -0.84
CTCFL-218ENST00000608440 PLCE1Q9P212 2302 aa9.79□□□□□ -0.84
CTCFL-218ENST00000608440 PLXNB1O43157 2135 aa9.78□□□□□ -0.84
CTCFL-218ENST00000608440 PRDX2P32119 198 aa9.78□□□□□ -0.84
CTCFL-218ENST00000608440 PMVKQ15126 192 aa9.78□□□□□ -0.84
CTCFL-218ENST00000608440 ZGRF1Q86YA3 2104 aa9.78□□□□□ -0.84
CTCFL-218ENST00000608440 ZCCHC24Q8N2G6 241 aaKnown RBP9.78□□□□□ -0.84
CTCFL-218ENST00000608440 TIMD4Q96H15 378 aa9.78□□□□□ -0.84
CTCFL-218ENST00000608440 NDUFA4L2Q9NRX3 87 aa9.78□□□□□ -0.84
CTCFL-218ENST00000608440 DUX3Q96PT4 197 aa9.78□□□□□ -0.84
CTCFL-218ENST00000608440 MRPL20Q9BYC9 149 aaKnown RBP9.78□□□□□ -0.84
CTCFL-218ENST00000608440 SLC25A39Q9BZJ4 359 aaPredicted RBP9.78□□□□□ -0.84
CTCFL-218ENST00000608440 DCHS1Q96JQ0 3298 aa9.78□□□□□ -0.84
CTCFL-218ENST00000608440 F8VRH5 84 aa9.77□□□□□ -0.84
CTCFL-218ENST00000608440 H7C1H1 209 aa9.77□□□□□ -0.84
CTCFL-218ENST00000608440 ELANEP08246 267 aa9.77□□□□□ -0.84
CTCFL-218ENST00000608440 ATP5IP56385 69 aaPredicted RBP9.77□□□□□ -0.84
CTCFL-218ENST00000608440 C3orf22Q8N5N4 141 aa9.77□□□□□ -0.84
CTCFL-218ENST00000608440 THAP8Q8NA92 274 aa9.77□□□□□ -0.84
CTCFL-218ENST00000608440 PRO1854Q9UHT4 67 aa9.77□□□□□ -0.84
CTCFL-218ENST00000608440 H3BMM0 161 aa9.76□□□□□ -0.85
CTCFL-218ENST00000608440 M0R2P5 195 aa9.76□□□□□ -0.85
CTCFL-218ENST00000608440 LGALS9O00182 355 aa9.76□□□□□ -0.85
CTCFL-218ENST00000608440 HOXB4P17483 251 aaPredicted RBP9.76□□□□□ -0.85
CTCFL-218ENST00000608440 SPINK14Q6IE38 97 aa9.76□□□□□ -0.85
CTCFL-218ENST00000608440 TMEM75Q8N9X5 138 aa9.76□□□□□ -0.85
CTCFL-218ENST00000608440 PRR7Q8TB68 274 aa9.76□□□□□ -0.85
CTCFL-218ENST00000608440 UBE2WQ96B02 151 aa9.76□□□□□ -0.85
CTCFL-218ENST00000608440 TRAV26-2A0A0B4J265 109 aa9.76□□□□□ -0.85
CTCFL-218ENST00000608440 CD3EP07766 207 aa9.76□□□□□ -0.85
CTCFL-218ENST00000608440 EGR2P11161 476 aaPredicted RBP9.76□□□□□ -0.85
CTCFL-218ENST00000608440 MAGEA5P43359 124 aa9.76□□□□□ -0.85
CTCFL-218ENST00000608440 POU2AF1Q16633 256 aa9.76□□□□□ -0.85
CTCFL-218ENST00000608440 Q6ZS46 218 aa9.76□□□□□ -0.85
CTCFL-218ENST00000608440 OR4C13Q8NGP0 309 aa9.76□□□□□ -0.85
CTCFL-218ENST00000608440 MAP1BP46821 2468 aaKnown RBP9.76□□□□□ -0.85
CTCFL-218ENST00000608440 MED13Q9UHV7 2174 aa9.76□□□□□ -0.85
CTCFL-218ENST00000608440 LAGE3Q14657 143 aa9.76□□□□□ -0.85
CTCFL-218ENST00000608440 C4orf26Q17RF5 130 aa9.76□□□□□ -0.85
CTCFL-218ENST00000608440 Q8N8P6 123 aa9.76□□□□□ -0.85
CTCFL-218ENST00000608440 HES7Q9BYE0 225 aa9.76□□□□□ -0.85
CTCFL-218ENST00000608440 PINLYPA6NC86 204 aa9.75□□□□□ -0.85
CTCFL-218ENST00000608440 INS-IGF2F8WCM5 200 aa9.75□□□□□ -0.85
CTCFL-218ENST00000608440 K7EM74 188 aa9.75□□□□□ -0.85
CTCFL-218ENST00000608440 LINC01546A6NGU7 62 aa9.75□□□□□ -0.85
CTCFL-218ENST00000608440 LY6DQ14210 128 aa9.75□□□□□ -0.85
CTCFL-218ENST00000608440 Q1RN00 199 aa9.75□□□□□ -0.85
CTCFL-218ENST00000608440 LINC01559Q495D7 138 aa9.75□□□□□ -0.85
CTCFL-218ENST00000608440 LINC01620Q4KN68 170 aa9.75□□□□□ -0.85
CTCFL-218ENST00000608440 HRCT1Q6UXD1 115 aa9.75□□□□□ -0.85
CTCFL-218ENST00000608440 PRR25Q96S07 402 aa9.75□□□□□ -0.85
CTCFL-218ENST00000608440 AKAP13Q12802 2813 aa9.74□□□□□ -0.85
CTCFL-218ENST00000608440 ZNF22P17026 224 aaPredicted RBP9.74□□□□□ -0.85
CTCFL-218ENST00000608440 WT1P19544 449 aaPredicted RBP9.74□□□□□ -0.85
CTCFL-218ENST00000608440 ZNF672Q499Z4 452 aaPredicted RBP9.74□□□□□ -0.85
CTCFL-218ENST00000608440 LINC00527Q9UJ94 153 aa9.74□□□□□ -0.85
CTCFL-218ENST00000608440 CGB1A6NKQ9 187 aa9.74□□□□□ -0.85
CTCFL-218ENST00000608440 HLA-DMBP28068 263 aa9.74□□□□□ -0.85
CTCFL-218ENST00000608440 SUB1P53999 127 aaKnown RBP eCLIP9.74□□□□□ -0.85
CTCFL-218ENST00000608440 IGLV2-18A0A075B6J9 118 aa9.73□□□□□ -0.85
CTCFL-218ENST00000608440 IGKV1D-17A0A075B6S4 117 aa9.73□□□□□ -0.85
CTCFL-218ENST00000608440 HERVK_113P61574 105 aa9.73□□□□□ -0.85
CTCFL-218ENST00000608440 ORM1P02763 201 aa9.73□□□□□ -0.85
CTCFL-218ENST00000608440 DTX2Q86UW9 622 aa9.73□□□□□ -0.85
CTCFL-218ENST00000608440 KLF14Q8TD94 323 aaPredicted RBP9.73□□□□□ -0.85
CTCFL-218ENST00000608440 PRR14LQ5THK1 2151 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms