RNA–Protein interactions for RNA: ENST00000608287.1

SGMS1-208, Transcript of sphingomyelin synthase 1, humanhuman

TSL 4

Gene SGMS1, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-208ENST00000608287 RXFP4Q8TDU9 374 aa13.53□□□□□ -0.24
SGMS1-208ENST00000608287 RAB24Q969Q5 203 aa13.53□□□□□ -0.24
SGMS1-208ENST00000608287 GNPNAT1Q96EK6 184 aaPredicted RBP13.53□□□□□ -0.24
SGMS1-208ENST00000608287 RBAKDNA6NC62 111 aa13.52□□□□□ -0.25
SGMS1-208ENST00000608287 DIRC3C9JPN6 131 aa13.52□□□□□ -0.25
SGMS1-208ENST00000608287 NMBP08949 121 aa13.52□□□□□ -0.25
SGMS1-208ENST00000608287 STAG3L2P0CL84 134 aa13.52□□□□□ -0.25
SGMS1-208ENST00000608287 STAG3L3P0CL85 134 aa13.52□□□□□ -0.25
SGMS1-208ENST00000608287 CMTM2Q8TAZ6 248 aa13.52□□□□□ -0.25
SGMS1-208ENST00000608287 RPH3ALQ9UNE2 315 aa13.52□□□□□ -0.25
SGMS1-208ENST00000608287 SNURFLB1AK76 121 aa13.51□□□□□ -0.25
SGMS1-208ENST00000608287 ZNF324O75467 553 aaPredicted RBP13.51□□□□□ -0.25
SGMS1-208ENST00000608287 TNP2Q05952 138 aa13.51□□□□□ -0.25
SGMS1-208ENST00000608287 ZFAND2AQ8N6M9 145 aa13.51□□□□□ -0.25
SGMS1-208ENST00000608287 ACTR3CQ9C0K3 210 aaPredicted RBP13.51□□□□□ -0.25
SGMS1-208ENST00000608287 PRR9Q5T870 116 aa13.5□□□□□ -0.25
SGMS1-208ENST00000608287 CBY3A6NI87 242 aa13.49□□□□□ -0.25
SGMS1-208ENST00000608287 EPM2AB3EWF7 344 aa13.49□□□□□ -0.25
SGMS1-208ENST00000608287 TAAR5O14804 337 aa13.49□□□□□ -0.25
SGMS1-208ENST00000608287 ATP5G1P05496 136 aa13.49□□□□□ -0.25
SGMS1-208ENST00000608287 GCHFRP30047 84 aa13.49□□□□□ -0.25
SGMS1-208ENST00000608287 ATP5G3P48201 142 aa13.49□□□□□ -0.25
SGMS1-208ENST00000608287 TMEM88Q6PEY1 159 aa13.49□□□□□ -0.25
SGMS1-208ENST00000608287 EIF4E3Q8N5X7 224 aaKnown RBP13.49□□□□□ -0.25
SGMS1-208ENST00000608287 NACAE9PAV3 2078 aa13.48□□□□□ -0.25
SGMS1-208ENST00000608287 TRBV7-9A0A0J9YWB2 115 aa13.48□□□□□ -0.25
SGMS1-208ENST00000608287 F5H768 121 aa13.48□□□□□ -0.25
SGMS1-208ENST00000608287 GOLT1AQ6ZVE7 132 aa13.48□□□□□ -0.25
SGMS1-208ENST00000608287 C6orf223Q8N319 242 aa13.48□□□□□ -0.25
SGMS1-208ENST00000608287 RGS13O14921 159 aa13.47□□□□□ -0.25
SGMS1-208ENST00000608287 CXorf1O96002 111 aa13.47□□□□□ -0.25
SGMS1-208ENST00000608287 Q6ZQT7 251 aa13.47□□□□□ -0.25
SGMS1-208ENST00000608287 SSX7Q7RTT5 188 aa13.47□□□□□ -0.25
SGMS1-208ENST00000608287 IQCF2Q8IXL9 164 aa13.47□□□□□ -0.25
SGMS1-208ENST00000608287 ZNF680Q8NEM1 530 aa13.47□□□□□ -0.25
SGMS1-208ENST00000608287 LINC00467Q9BRT7 94 aa13.47□□□□□ -0.25
SGMS1-208ENST00000608287 GAGE12BA1L429 117 aa13.46□□□□□ -0.25
SGMS1-208ENST00000608287 GAGE7O76087 117 aa13.46□□□□□ -0.25
SGMS1-208ENST00000608287 GAGE12FP0CL80 117 aa13.46□□□□□ -0.25
SGMS1-208ENST00000608287 GAGE12GP0CL81 117 aa13.46□□□□□ -0.25
SGMS1-208ENST00000608287 GAGE12IP0CL82 117 aa13.46□□□□□ -0.25
SGMS1-208ENST00000608287 GNG5P63218 68 aa13.46□□□□□ -0.25
SGMS1-208ENST00000608287 ANXA2RQ3ZCQ2 193 aa13.46□□□□□ -0.25
SGMS1-208ENST00000608287 ARL6IP6Q8N6S5 226 aa13.46□□□□□ -0.25
SGMS1-208ENST00000608287 C15orf53Q8NAA6 179 aa13.46□□□□□ -0.25
SGMS1-208ENST00000608287 ATG101Q9BSB4 218 aa13.46□□□□□ -0.25
SGMS1-208ENST00000608287 GSN-AS1Q9NRJ2 163 aa13.46□□□□□ -0.25
SGMS1-208ENST00000608287 CYTL1Q9NRR1 136 aa13.46□□□□□ -0.25
SGMS1-208ENST00000608287 TMEM167BQ9NRX6 74 aa13.46□□□□□ -0.25
SGMS1-208ENST00000608287 LENEPQ9Y5L5 61 aa13.46□□□□□ -0.25
SGMS1-208ENST00000608287 LRP1BQ9NZR2 4599 aa13.46□□□□□ -0.26
SGMS1-208ENST00000608287 IGHV1OR15-1A0A075B7D0 117 aa13.45□□□□□ -0.26
SGMS1-208ENST00000608287 AKR1C8PQ5T2L2 129 aa13.45□□□□□ -0.26
SGMS1-208ENST00000608287 SUN5Q8TC36 379 aa13.45□□□□□ -0.26
SGMS1-208ENST00000608287 TMED6Q8WW62 240 aa13.45□□□□□ -0.26
SGMS1-208ENST00000608287 ST6GAL2Q96JF0 529 aa13.45□□□□□ -0.26
SGMS1-208ENST00000608287 ARPC5LQ9BPX5 153 aa13.45□□□□□ -0.26
SGMS1-208ENST00000608287 CTXND1A0A1B0GTU2 59 aa13.44□□□□□ -0.26
SGMS1-208ENST00000608287 DAZ2Q13117 558 aaKnown RBP13.44□□□□□ -0.26
SGMS1-208ENST00000608287 ZNF726P1Q15940 193 aa13.44□□□□□ -0.26
SGMS1-208ENST00000608287 KCNRGQ8N5I3 272 aa13.44□□□□□ -0.26
SGMS1-208ENST00000608287 LINC00612Q8N6U2 182 aa13.44□□□□□ -0.26
SGMS1-208ENST00000608287 C11orf72Q8NBR9 251 aa13.44□□□□□ -0.26
SGMS1-208ENST00000608287 OR11H4Q8NGC9 324 aa13.44□□□□□ -0.26
SGMS1-208ENST00000608287 TP53TG3Q9ULZ0 132 aa13.44□□□□□ -0.26
SGMS1-208ENST00000608287 TRAV8-1A0A0A6YYK1 113 aa13.43□□□□□ -0.26
SGMS1-208ENST00000608287 NBDYA0A0U1RRE5 68 aa13.43□□□□□ -0.26
SGMS1-208ENST00000608287 INAFM2P0DMQ5 153 aa13.43□□□□□ -0.26
SGMS1-208ENST00000608287 SUMO1P63165 101 aaKnown RBP13.43□□□□□ -0.26
SGMS1-208ENST00000608287 ZNF345Q14585 488 aa13.43□□□□□ -0.26
SGMS1-208ENST00000608287 MUC21Q5SSG8 566 aa13.43□□□□□ -0.26
SGMS1-208ENST00000608287 Q6ZTI0 123 aa13.43□□□□□ -0.26
SGMS1-208ENST00000608287 SPATA12Q7Z6I5 190 aa13.43□□□□□ -0.26
SGMS1-208ENST00000608287 C5orf17Q8NAS9 161 aa13.43□□□□□ -0.26
SGMS1-208ENST00000608287 HMSDA8MTL9 139 aa13.42□□□□□ -0.26
SGMS1-208ENST00000608287 KLF12Q9Y4X4 402 aa13.42□□□□□ -0.26
SGMS1-208ENST00000608287 SERTM2A0A1B0GWG4 89 aa13.41□□□□□ -0.26
SGMS1-208ENST00000608287 GGTLC3B5MD39 225 aa13.41□□□□□ -0.26
SGMS1-208ENST00000608287 K7EQM0 130 aa13.41□□□□□ -0.26
SGMS1-208ENST00000608287 TCRAP04437 139 aa13.41□□□□□ -0.26
SGMS1-208ENST00000608287 FGF8P55075 233 aaPredicted RBP13.41□□□□□ -0.26
SGMS1-208ENST00000608287 TCL1AP56279 114 aa13.41□□□□□ -0.26
SGMS1-208ENST00000608287 OR5I1Q13606 314 aa13.41□□□□□ -0.26
SGMS1-208ENST00000608287 IBA57Q5T440 356 aaKnown RBP13.41□□□□□ -0.26
SGMS1-208ENST00000608287 Q6AWC8 147 aa13.41□□□□□ -0.26
SGMS1-208ENST00000608287 SGK494Q96LW2 274 aa13.41□□□□□ -0.26
SGMS1-208ENST00000608287 TREM1Q9NP99 234 aa13.41□□□□□ -0.26
SGMS1-208ENST00000608287 TRGV2A0A075B6R0 118 aa13.4□□□□□ -0.26
SGMS1-208ENST00000608287 TRGV1A0A0A0MS02 117 aa13.4□□□□□ -0.26
SGMS1-208ENST00000608287 A0A0D9SG52 128 aa13.4□□□□□ -0.26
SGMS1-208ENST00000608287 F6UZH7 168 aa13.4□□□□□ -0.26
SGMS1-208ENST00000608287 NUDT3O95989 172 aa13.4□□□□□ -0.26
SGMS1-208ENST00000608287 FAM159AQ6UWV7 190 aa13.4□□□□□ -0.26
SGMS1-208ENST00000608287 TMPRSS5Q9H3S3 457 aa13.4□□□□□ -0.26
SGMS1-208ENST00000608287 APOBP04114 4563 aaKnown RBP13.4□□□□□ -0.26
SGMS1-208ENST00000608287 KANTRA0A1W2PQU2 76 aa13.39□□□□□ -0.27
SGMS1-208ENST00000608287 A0A1W2PRE2 83 aa13.39□□□□□ -0.27
SGMS1-208ENST00000608287 UBE2G2P60604 165 aa13.39□□□□□ -0.27
SGMS1-208ENST00000608287 ZNF415Q09FC8 603 aa13.39□□□□□ -0.27
SGMS1-208ENST00000608287 TVP23CQ96ET8 276 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms