RNA–Protein interactions for RNA: ENST00000606676.1

SHROOM1-207, Transcript of shroom family member 1, humanhuman

Gene SHROOM1, Length 351 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-207ENST00000606676 CBY3A6NI87 242 aa9.02□□□□□ -0.97
SHROOM1-207ENST00000606676 TMEM88Q6PEY1 159 aa9.02□□□□□ -0.97
SHROOM1-207ENST00000606676 EIF4E3Q8N5X7 224 aaKnown RBP9.02□□□□□ -0.97
SHROOM1-207ENST00000606676 TVP23CQ96ET8 276 aa9.02□□□□□ -0.97
SHROOM1-207ENST00000606676 TMPRSS5Q9H3S3 457 aa9.02□□□□□ -0.97
SHROOM1-207ENST00000606676 GSN-AS1Q9NRJ2 163 aa9.02□□□□□ -0.97
SHROOM1-207ENST00000606676 TP53TG3Q9ULZ0 132 aa9.02□□□□□ -0.97
SHROOM1-207ENST00000606676 IGHV1OR15-1A0A075B7D0 117 aa9.01□□□□□ -0.97
SHROOM1-207ENST00000606676 SNURFLB1AK76 121 aa9.01□□□□□ -0.97
SHROOM1-207ENST00000606676 GGTLC3B5MD39 225 aa9.01□□□□□ -0.97
SHROOM1-207ENST00000606676 SUMO1P63165 101 aaKnown RBP9.01□□□□□ -0.97
SHROOM1-207ENST00000606676 DAZ2Q13117 558 aaKnown RBP9.01□□□□□ -0.97
SHROOM1-207ENST00000606676 AKR1C8PQ5T2L2 129 aa9.01□□□□□ -0.97
SHROOM1-207ENST00000606676 Q6AWC8 147 aa9.01□□□□□ -0.97
SHROOM1-207ENST00000606676 C5orf17Q8NAS9 161 aa9.01□□□□□ -0.97
SHROOM1-207ENST00000606676 ZNF680Q8NEM1 530 aa9.01□□□□□ -0.97
SHROOM1-207ENST00000606676 A0A1W2PRE2 83 aa9□□□□□ -0.97
SHROOM1-207ENST00000606676 BCL2L11O43521 198 aa9□□□□□ -0.97
SHROOM1-207ENST00000606676 TCRAP04437 139 aa9□□□□□ -0.97
SHROOM1-207ENST00000606676 ATP5G1P05496 136 aa9□□□□□ -0.97
SHROOM1-207ENST00000606676 ATP5G3P48201 142 aa9□□□□□ -0.97
SHROOM1-207ENST00000606676 FHITP49789 147 aa9□□□□□ -0.97
SHROOM1-207ENST00000606676 Q6ZTI0 123 aa9□□□□□ -0.97
SHROOM1-207ENST00000606676 IQCF2Q8IXL9 164 aa9□□□□□ -0.97
SHROOM1-207ENST00000606676 SGK494Q96LW2 274 aa9□□□□□ -0.97
SHROOM1-207ENST00000606676 EPDR1Q9UM22 224 aa9□□□□□ -0.97
SHROOM1-207ENST00000606676 KLF12Q9Y4X4 402 aa9□□□□□ -0.97
SHROOM1-207ENST00000606676 GAGE12BA1L429 117 aa8.99□□□□□ -0.97
SHROOM1-207ENST00000606676 RGS13O14921 159 aa8.99□□□□□ -0.97
SHROOM1-207ENST00000606676 GAGE7O76087 117 aa8.99□□□□□ -0.97
SHROOM1-207ENST00000606676 IGLV2-11P01706 119 aa8.99□□□□□ -0.97
SHROOM1-207ENST00000606676 SEC11BP0C7V7 166 aa8.99□□□□□ -0.97
SHROOM1-207ENST00000606676 GAGE12FP0CL80 117 aa8.99□□□□□ -0.97
SHROOM1-207ENST00000606676 GAGE12GP0CL81 117 aa8.99□□□□□ -0.97
SHROOM1-207ENST00000606676 GAGE12IP0CL82 117 aa8.99□□□□□ -0.97
SHROOM1-207ENST00000606676 FGF8P55075 233 aaPredicted RBP8.99□□□□□ -0.97
SHROOM1-207ENST00000606676 TCL1AP56279 114 aa8.99□□□□□ -0.97
SHROOM1-207ENST00000606676 TMUB2Q71RG4 321 aa8.99□□□□□ -0.97
SHROOM1-207ENST00000606676 TCTE3Q8IZS6 198 aa8.99□□□□□ -0.97
SHROOM1-207ENST00000606676 ZNF471Q9BX82 626 aaPredicted RBP8.99□□□□□ -0.97
SHROOM1-207ENST00000606676 SERTM2A0A1B0GWG4 89 aa8.98□□□□□ -0.97
SHROOM1-207ENST00000606676 KANTRA0A1W2PQU2 76 aa8.98□□□□□ -0.97
SHROOM1-207ENST00000606676 MAP1LC3B2A6NCE7 125 aa8.98□□□□□ -0.97
SHROOM1-207ENST00000606676 F5H768 121 aa8.98□□□□□ -0.97
SHROOM1-207ENST00000606676 MUC21Q5SSG8 566 aa8.98□□□□□ -0.97
SHROOM1-207ENST00000606676 IBA57Q5T440 356 aaKnown RBP8.98□□□□□ -0.97
SHROOM1-207ENST00000606676 MAP1LC3BQ9GZQ8 125 aa8.98□□□□□ -0.97
SHROOM1-207ENST00000606676 FAT2Q9NYQ8 4349 aa8.98□□□□□ -0.97
SHROOM1-207ENST00000606676 FAM74A7A6NL05 159 aa8.97□□□□□ -0.97
SHROOM1-207ENST00000606676 F6UZH7 168 aa8.97□□□□□ -0.97
SHROOM1-207ENST00000606676 SPINK4O60575 86 aa8.97□□□□□ -0.97
SHROOM1-207ENST00000606676 P0DMU3 169 aa8.97□□□□□ -0.97
SHROOM1-207ENST00000606676 FAM231AP0DMU4 169 aa8.97□□□□□ -0.97
SHROOM1-207ENST00000606676 FAM231CP0DMU5 169 aa8.97□□□□□ -0.97
SHROOM1-207ENST00000606676 HOXA5P20719 270 aa8.97□□□□□ -0.97
SHROOM1-207ENST00000606676 UBE2G2P60604 165 aa8.97□□□□□ -0.97
SHROOM1-207ENST00000606676 TDRG1Q3Y452 100 aa8.97□□□□□ -0.97
SHROOM1-207ENST00000606676 LGALSLQ3ZCW2 172 aaPredicted RBP8.97□□□□□ -0.97
SHROOM1-207ENST00000606676 POM121L12Q8N7R1 296 aa8.97□□□□□ -0.97
SHROOM1-207ENST00000606676 CYB561D1Q8N8Q1 229 aa8.97□□□□□ -0.97
SHROOM1-207ENST00000606676 LINC00479Q96M42 142 aa8.97□□□□□ -0.97
SHROOM1-207ENST00000606676 C18orf15Q96N68 181 aa8.97□□□□□ -0.97
SHROOM1-207ENST00000606676 TREM1Q9NP99 234 aa8.97□□□□□ -0.97
SHROOM1-207ENST00000606676 PSG8Q9UQ74 426 aa8.97□□□□□ -0.97
SHROOM1-207ENST00000606676 UMAD1C9J7I0 102 aa8.96□□□□□ -0.98
SHROOM1-207ENST00000606676 ZNF80P51504 273 aaPredicted RBP8.96□□□□□ -0.98
SHROOM1-207ENST00000606676 FLI1Q01543 452 aaPredicted RBP8.96□□□□□ -0.98
SHROOM1-207ENST00000606676 FAM159AQ6UWV7 190 aa8.96□□□□□ -0.98
SHROOM1-207ENST00000606676 C15orf53Q8NAA6 179 aa8.96□□□□□ -0.98
SHROOM1-207ENST00000606676 MBD3L1Q8WWY6 194 aa8.96□□□□□ -0.98
SHROOM1-207ENST00000606676 C8orf49Q96NF6 230 aa8.96□□□□□ -0.98
SHROOM1-207ENST00000606676 ATG101Q9BSB4 218 aa8.96□□□□□ -0.98
SHROOM1-207ENST00000606676 MDFICQ9P1T7 246 aa8.96□□□□□ -0.98
SHROOM1-207ENST00000606676 TRGV1A0A0A0MS02 117 aa8.95□□□□□ -0.98
SHROOM1-207ENST00000606676 TRAV34A0A0B4J273 112 aa8.95□□□□□ -0.98
SHROOM1-207ENST00000606676 TRAV21A0A0B4J279 112 aa8.95□□□□□ -0.98
SHROOM1-207ENST00000606676 K7EQM0 130 aa8.95□□□□□ -0.98
SHROOM1-207ENST00000606676 PFDN1O60925 122 aa8.95□□□□□ -0.98
SHROOM1-207ENST00000606676 C1QBP02746 253 aa8.95□□□□□ -0.98
SHROOM1-207ENST00000606676 TMEM75Q8N9X5 138 aa8.95□□□□□ -0.98
SHROOM1-207ENST00000606676 STOML3Q8TAV4 291 aa8.95□□□□□ -0.98
SHROOM1-207ENST00000606676 FAM213BQ8TBF2 198 aa8.95□□□□□ -0.98
SHROOM1-207ENST00000606676 NKX6-2Q9C056 277 aaPredicted RBP8.95□□□□□ -0.98
SHROOM1-207ENST00000606676 DNAH17Q9UFH2 4485 aa8.94□□□□□ -0.98
SHROOM1-207ENST00000606676 TRGV2A0A075B6R0 118 aa8.94□□□□□ -0.98
SHROOM1-207ENST00000606676 FBLL1A6NHQ2 334 aaKnown RBP8.94□□□□□ -0.98
SHROOM1-207ENST00000606676 GNRH2O43555 120 aa8.94□□□□□ -0.98
SHROOM1-207ENST00000606676 IFNA7P01567 189 aa8.94□□□□□ -0.98
SHROOM1-207ENST00000606676 EIF5AP63241 154 aaKnown RBP8.94□□□□□ -0.98
SHROOM1-207ENST00000606676 ZNF415Q09FC8 603 aa8.94□□□□□ -0.98
SHROOM1-207ENST00000606676 OR5I1Q13606 314 aa8.94□□□□□ -0.98
SHROOM1-207ENST00000606676 TMEM183BQ1AE95 376 aa8.94□□□□□ -0.98
SHROOM1-207ENST00000606676 LGALS9BQ3B8N2 356 aa8.94□□□□□ -0.98
SHROOM1-207ENST00000606676 PRNTQ86SH4 94 aa8.94□□□□□ -0.98
SHROOM1-207ENST00000606676 TMEM183AQ8IXX5 376 aa8.94□□□□□ -0.98
SHROOM1-207ENST00000606676 SFT2D1Q8WV19 159 aa8.94□□□□□ -0.98
SHROOM1-207ENST00000606676 NDFIP1Q9BT67 221 aa8.94□□□□□ -0.98
SHROOM1-207ENST00000606676 MRPL16Q9NX20 251 aaKnown RBP8.94□□□□□ -0.98
SHROOM1-207ENST00000606676 C11orf21Q9P2W6 132 aa8.94□□□□□ -0.98
SHROOM1-207ENST00000606676 NAGKQ9UJ70 344 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms