RNA–Protein interactions for RNA: ENST00000603451.1

SQSTM1P1-201, Transcript of sequestosome 1 pseudogene 1, humanhuman

BASIC

Gene SQSTM1P1, Length 859 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1P1-201ENST00000603451 Q86TA4 180 aa6.85□□□□□ -1.31
SQSTM1P1-201ENST00000603451 ZNF680Q8NEM1 530 aa6.85□□□□□ -1.31
SQSTM1P1-201ENST00000603451 Q8TAT8 98 aa6.85□□□□□ -1.31
SQSTM1P1-201ENST00000603451 SMIM12Q96EX1 92 aa6.85□□□□□ -1.31
SQSTM1P1-201ENST00000603451 TREM1Q9NP99 234 aa6.85□□□□□ -1.31
SQSTM1P1-201ENST00000603451 GNG13Q9P2W3 67 aa6.85□□□□□ -1.31
SQSTM1P1-201ENST00000603451 VAX2Q9UIW0 290 aa6.85□□□□□ -1.31
SQSTM1P1-201ENST00000603451 PSG8Q9UQ74 426 aa6.85□□□□□ -1.31
SQSTM1P1-201ENST00000603451 BOLA1Q9Y3E2 137 aa6.85□□□□□ -1.31
SQSTM1P1-201ENST00000603451 TRAV21A0A0B4J279 112 aa6.84□□□□□ -1.31
SQSTM1P1-201ENST00000603451 A0A0J9YWU9 116 aa6.84□□□□□ -1.31
SQSTM1P1-201ENST00000603451 ATP6V1G1O75348 118 aa6.84□□□□□ -1.31
SQSTM1P1-201ENST00000603451 ZNF324O75467 553 aaPredicted RBP6.84□□□□□ -1.31
SQSTM1P1-201ENST00000603451 AKR1C3P42330 323 aa6.84□□□□□ -1.31
SQSTM1P1-201ENST00000603451 ATP5G3P48201 142 aa6.84□□□□□ -1.31
SQSTM1P1-201ENST00000603451 TMEM183BQ1AE95 376 aa6.84□□□□□ -1.31
SQSTM1P1-201ENST00000603451 TDRG1Q3Y452 100 aa6.84□□□□□ -1.31
SQSTM1P1-201ENST00000603451 ANXA2RQ3ZCQ2 193 aa6.84□□□□□ -1.31
SQSTM1P1-201ENST00000603451 IBA57Q5T440 356 aaKnown RBP6.84□□□□□ -1.31
SQSTM1P1-201ENST00000603451 C2CD4CQ8TF44 421 aa6.84□□□□□ -1.31
SQSTM1P1-201ENST00000603451 HUWE1Q7Z6Z7 4374 aaKnown RBP6.84□□□□□ -1.31
SQSTM1P1-201ENST00000603451 IGHV3OR16-12A0A075B7B8 117 aa6.83□□□□□ -1.32
SQSTM1P1-201ENST00000603451 TRAV8-1A0A0A6YYK1 113 aa6.83□□□□□ -1.32
SQSTM1P1-201ENST00000603451 TRAV12-3A0A0B4J271 114 aa6.83□□□□□ -1.32
SQSTM1P1-201ENST00000603451 LOC102723971A0A1B0GUV8 181 aa6.83□□□□□ -1.32
SQSTM1P1-201ENST00000603451 A0A1B0GV50 99 aa6.83□□□□□ -1.32
SQSTM1P1-201ENST00000603451 LYRM9A8MSI8 78 aa6.83□□□□□ -1.32
SQSTM1P1-201ENST00000603451 TMEM250H0YL14 139 aa6.83□□□□□ -1.32
SQSTM1P1-201ENST00000603451 C3orf84H3BNL1 204 aa6.83□□□□□ -1.32
SQSTM1P1-201ENST00000603451 LTAP01374 205 aa6.83□□□□□ -1.32
SQSTM1P1-201ENST00000603451 RBMY1A1P0DJD3 496 aaKnown RBP6.83□□□□□ -1.32
SQSTM1P1-201ENST00000603451 RBMY1CP0DJD4 496 aa6.83□□□□□ -1.32
SQSTM1P1-201ENST00000603451 RBMY1FQ15415 496 aaKnown RBP6.83□□□□□ -1.32
SQSTM1P1-201ENST00000603451 SMUG1Q53HV7 270 aa6.83□□□□□ -1.32
SQSTM1P1-201ENST00000603451 EIF4E3Q8N5X7 224 aaKnown RBP6.83□□□□□ -1.32
SQSTM1P1-201ENST00000603451 MUC7Q8TAX7 377 aa6.83□□□□□ -1.32
SQSTM1P1-201ENST00000603451 RNASE8Q8TDE3 154 aaKnown RBP6.83□□□□□ -1.32
SQSTM1P1-201ENST00000603451 KCNS1Q96KK3 526 aa6.83□□□□□ -1.32
SQSTM1P1-201ENST00000603451 LINC01587Q99440 93 aa6.83□□□□□ -1.32
SQSTM1P1-201ENST00000603451 TP53TG3Q9ULZ0 132 aa6.83□□□□□ -1.32
SQSTM1P1-201ENST00000603451 IGHV1OR15-1A0A075B7D0 117 aa6.82□□□□□ -1.32
SQSTM1P1-201ENST00000603451 PFN1P07737 140 aaKnown RBP6.82□□□□□ -1.32
SQSTM1P1-201ENST00000603451 SPART-AS1P0CW21 52 aa6.82□□□□□ -1.32
SQSTM1P1-201ENST00000603451 RNASE4P34096 147 aaKnown RBP6.82□□□□□ -1.32
SQSTM1P1-201ENST00000603451 CCL20P78556 96 aa6.82□□□□□ -1.32
SQSTM1P1-201ENST00000603451 BTN1A1Q13410 526 aa6.82□□□□□ -1.32
SQSTM1P1-201ENST00000603451 PRR9Q5T870 116 aa6.82□□□□□ -1.32
SQSTM1P1-201ENST00000603451 ZNF767PQ75MW2 155 aa6.82□□□□□ -1.32
SQSTM1P1-201ENST00000603451 C11orf45Q8TAV5 145 aa6.82□□□□□ -1.32
SQSTM1P1-201ENST00000603451 SMDT1Q9H4I9 107 aa6.82□□□□□ -1.32
SQSTM1P1-201ENST00000603451 TRGV11A0A075B6L2 103 aa6.81□□□□□ -1.32
SQSTM1P1-201ENST00000603451 SCO2A0A1W2PP80 73 aa6.81□□□□□ -1.32
SQSTM1P1-201ENST00000603451 DAZ2Q13117 558 aaKnown RBP6.81□□□□□ -1.32
SQSTM1P1-201ENST00000603451 KIR3DS1Q14943 382 aa6.81□□□□□ -1.32
SQSTM1P1-201ENST00000603451 ZNF506Q5JVG8 444 aa6.81□□□□□ -1.32
SQSTM1P1-201ENST00000603451 FAM159AQ6UWV7 190 aa6.81□□□□□ -1.32
SQSTM1P1-201ENST00000603451 PRNTQ86SH4 94 aa6.81□□□□□ -1.32
SQSTM1P1-201ENST00000603451 TMEM183AQ8IXX5 376 aa6.81□□□□□ -1.32
SQSTM1P1-201ENST00000603451 TVP23CQ96ET8 276 aa6.81□□□□□ -1.32
SQSTM1P1-201ENST00000603451 NDUFAF3Q9BU61 184 aa6.81□□□□□ -1.32
SQSTM1P1-201ENST00000603451 TIMM8BQ9Y5J9 83 aaPredicted RBP6.81□□□□□ -1.32
SQSTM1P1-201ENST00000603451 PLAC8L1A1L4L8 177 aa6.8□□□□□ -1.32
SQSTM1P1-201ENST00000603451 CXorf65A6NEN9 183 aa6.8□□□□□ -1.32
SQSTM1P1-201ENST00000603451 NUPR2A6NF83 97 aa6.8□□□□□ -1.32
SQSTM1P1-201ENST00000603451 RBFOX3A6NFN3 312 aa6.8□□□□□ -1.32
SQSTM1P1-201ENST00000603451 CBY3A6NI87 242 aa6.8□□□□□ -1.32
SQSTM1P1-201ENST00000603451 FABP5P3A8MUU1 101 aa6.8□□□□□ -1.32
SQSTM1P1-201ENST00000603451 SNURFLB1AK76 121 aa6.8□□□□□ -1.32
SQSTM1P1-201ENST00000603451 J3KRW8 73 aa6.8□□□□□ -1.32
SQSTM1P1-201ENST00000603451 GCGP01275 180 aa6.8□□□□□ -1.32
SQSTM1P1-201ENST00000603451 PRB4P10163 310 aaPredicted RBP6.8□□□□□ -1.32
SQSTM1P1-201ENST00000603451 S100A1P23297 94 aa6.8□□□□□ -1.32
SQSTM1P1-201ENST00000603451 RAB14P61106 215 aa6.8□□□□□ -1.32
SQSTM1P1-201ENST00000603451 ZNF415Q09FC8 603 aa6.8□□□□□ -1.32
SQSTM1P1-201ENST00000603451 FAM162BQ5T6X4 162 aa6.8□□□□□ -1.32
SQSTM1P1-201ENST00000603451 MLST8Q9BVC4 326 aa6.8□□□□□ -1.32
SQSTM1P1-201ENST00000603451 SDF2L1Q9HCN8 221 aa6.8□□□□□ -1.32
SQSTM1P1-201ENST00000603451 BIN3Q9NQY0 253 aa6.8□□□□□ -1.32
SQSTM1P1-201ENST00000603451 DKK2Q9UBU2 259 aa6.8□□□□□ -1.32
SQSTM1P1-201ENST00000603451 TRAV34A0A0B4J273 112 aa6.79□□□□□ -1.32
SQSTM1P1-201ENST00000603451 ZNF705GA8MUZ8 300 aaPredicted RBP6.79□□□□□ -1.32
SQSTM1P1-201ENST00000603451 C9JCJ5 164 aa6.79□□□□□ -1.32
SQSTM1P1-201ENST00000603451 RPL35P42766 123 aaKnown RBP6.79□□□□□ -1.32
SQSTM1P1-201ENST00000603451 TCL1AP56279 114 aa6.79□□□□□ -1.32
SQSTM1P1-201ENST00000603451 LGALS9BQ3B8N2 356 aa6.79□□□□□ -1.32
SQSTM1P1-201ENST00000603451 C11orf72Q8NBR9 251 aa6.79□□□□□ -1.32
SQSTM1P1-201ENST00000603451 LINC00479Q96M42 142 aa6.79□□□□□ -1.32
SQSTM1P1-201ENST00000603451 C18orf15Q96N68 181 aa6.79□□□□□ -1.32
SQSTM1P1-201ENST00000603451 SPXQ9BT56 116 aa6.79□□□□□ -1.32
SQSTM1P1-201ENST00000603451 CXCL1P09341 107 aa6.78□□□□□ -1.32
SQSTM1P1-201ENST00000603451 HTN1P15515 57 aa6.78□□□□□ -1.32
SQSTM1P1-201ENST00000603451 GNG4P50150 75 aa6.78□□□□□ -1.32
SQSTM1P1-201ENST00000603451 TCTAP57738 103 aa6.78□□□□□ -1.32
SQSTM1P1-201ENST00000603451 ZNF674Q2M3X9 581 aa6.78□□□□□ -1.32
SQSTM1P1-201ENST00000603451 FAM222AQ5U5X8 452 aa6.78□□□□□ -1.32
SQSTM1P1-201ENST00000603451 BAGE2Q86Y30 109 aa6.78□□□□□ -1.32
SQSTM1P1-201ENST00000603451 LINC00612Q8N6U2 182 aa6.78□□□□□ -1.32
SQSTM1P1-201ENST00000603451 FAM210BQ96KR6 192 aa6.78□□□□□ -1.32
SQSTM1P1-201ENST00000603451 SGK494Q96LW2 274 aa6.78□□□□□ -1.32
SQSTM1P1-201ENST00000603451 C8orf49Q96NF6 230 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms