RNA–Protein interactions for RNA: ENST00000600244.5

SSBP4-207, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-207ENST00000600244 PAXXQ9BUH6 204 aa12.08□□□□□ -0.48
SSBP4-207ENST00000600244 ZNF331Q9NQX6 463 aaPredicted RBP12.08□□□□□ -0.48
SSBP4-207ENST00000600244 MRPS16Q9Y3D3 137 aaKnown RBP12.08□□□□□ -0.48
SSBP4-207ENST00000600244 DNAH8Q96JB1 4490 aa12.07□□□□□ -0.48
SSBP4-207ENST00000600244 A0A087WTM6 91 aa12.07□□□□□ -0.48
SSBP4-207ENST00000600244 CBY3A6NI87 242 aa12.07□□□□□ -0.48
SSBP4-207ENST00000600244 SLC17A3O00476 420 aa12.07□□□□□ -0.48
SSBP4-207ENST00000600244 FHITP49789 147 aa12.07□□□□□ -0.48
SSBP4-207ENST00000600244 PDE6HQ13956 83 aa12.07□□□□□ -0.48
SSBP4-207ENST00000600244 DPPA3Q6W0C5 159 aa12.07□□□□□ -0.48
SSBP4-207ENST00000600244 PHYHIPLQ96FC7 376 aa12.07□□□□□ -0.48
SSBP4-207ENST00000600244 C20orf173Q96LM9 149 aa12.07□□□□□ -0.48
SSBP4-207ENST00000600244 SLC50A1Q9BRV3 221 aa12.07□□□□□ -0.48
SSBP4-207ENST00000600244 TMEM70Q9BUB7 260 aa12.07□□□□□ -0.48
SSBP4-207ENST00000600244 HMGB3O15347 200 aaKnown RBP12.06□□□□□ -0.48
SSBP4-207ENST00000600244 OR7C2O60412 319 aa12.06□□□□□ -0.48
SSBP4-207ENST00000600244 PRM2P04554 102 aa12.06□□□□□ -0.48
SSBP4-207ENST00000600244 SNRPCP09234 159 aaKnown RBP12.06□□□□□ -0.48
SSBP4-207ENST00000600244 NBEAP1P0C6P0 100 aa12.06□□□□□ -0.48
SSBP4-207ENST00000600244 DNAH10OSP0CZ25 163 aa12.06□□□□□ -0.48
SSBP4-207ENST00000600244 ID1P41134 155 aa12.06□□□□□ -0.48
SSBP4-207ENST00000600244 SULT1A2P50226 295 aa12.06□□□□□ -0.48
SSBP4-207ENST00000600244 FOXI2Q6ZQN5 318 aa12.06□□□□□ -0.48
SSBP4-207ENST00000600244 C16orf92Q96LL3 132 aa12.06□□□□□ -0.48
SSBP4-207ENST00000600244 H3BTX0 84 aa12.05□□□□□ -0.48
SSBP4-207ENST00000600244 PLA2G1BP04054 148 aaKnown RBP12.05□□□□□ -0.48
SSBP4-207ENST00000600244 OR10J4P0C629 311 aa12.05□□□□□ -0.48
SSBP4-207ENST00000600244 ARL14EPLP0DKL9 152 aa12.05□□□□□ -0.48
SSBP4-207ENST00000600244 RAB5CP51148 216 aa12.05□□□□□ -0.48
SSBP4-207ENST00000600244 PSG9Q00887 426 aa12.05□□□□□ -0.48
SSBP4-207ENST00000600244 MBD3L1Q8WWY6 194 aa12.05□□□□□ -0.48
SSBP4-207ENST00000600244 PLAC8L1A1L4L8 177 aa12.04□□□□□ -0.48
SSBP4-207ENST00000600244 CXorf1O96002 111 aa12.04□□□□□ -0.48
SSBP4-207ENST00000600244 GCHFRP30047 84 aa12.04□□□□□ -0.48
SSBP4-207ENST00000600244 UBE2L3P68036 154 aaKnown RBP12.04□□□□□ -0.48
SSBP4-207ENST00000600244 IGFL4Q6B9Z1 124 aa12.04□□□□□ -0.48
SSBP4-207ENST00000600244 OR4B1Q8NGF8 309 aa12.04□□□□□ -0.48
SSBP4-207ENST00000600244 ZNF705GA8MUZ8 300 aaPredicted RBP12.03□□□□□ -0.48
SSBP4-207ENST00000600244 PSG3Q16557 428 aa12.03□□□□□ -0.48
SSBP4-207ENST00000600244 RNF182Q8N6D2 247 aa12.03□□□□□ -0.48
SSBP4-207ENST00000600244 BLNKQ8WV28 456 aa12.03□□□□□ -0.48
SSBP4-207ENST00000600244 TNFRSF18Q9Y5U5 241 aa12.03□□□□□ -0.48
SSBP4-207ENST00000600244 MAP1LC3B2A6NCE7 125 aa12.02□□□□□ -0.49
SSBP4-207ENST00000600244 OXTP01178 125 aa12.02□□□□□ -0.49
SSBP4-207ENST00000600244 TSPOP30536 169 aa12.02□□□□□ -0.49
SSBP4-207ENST00000600244 FAM213BQ8TBF2 198 aa12.02□□□□□ -0.49
SSBP4-207ENST00000600244 RXFP4Q8TDU9 374 aa12.02□□□□□ -0.49
SSBP4-207ENST00000600244 IGF2BP2-AS1Q96M15 143 aa12.02□□□□□ -0.49
SSBP4-207ENST00000600244 LINC00052Q96N35 136 aa12.02□□□□□ -0.49
SSBP4-207ENST00000600244 MAP1LC3BQ9GZQ8 125 aa12.02□□□□□ -0.49
SSBP4-207ENST00000600244 FAM74A1Q5RGS3 127 aa12.01□□□□□ -0.49
SSBP4-207ENST00000600244 ALKAL2Q6UX46 152 aa12.01□□□□□ -0.49
SSBP4-207ENST00000600244 LRRC20Q8TCA0 184 aa12.01□□□□□ -0.49
SSBP4-207ENST00000600244 MRPL53Q96EL3 112 aaKnown RBP12.01□□□□□ -0.49
SSBP4-207ENST00000600244 TMEM208Q9BTX3 173 aa12.01□□□□□ -0.49
SSBP4-207ENST00000600244 TMEM167BQ9NRX6 74 aa12.01□□□□□ -0.49
SSBP4-207ENST00000600244 TRAV1-1A0A0B4J248 108 aa12□□□□□ -0.49
SSBP4-207ENST00000600244 A8MTW9 85 aa12□□□□□ -0.49
SSBP4-207ENST00000600244 FGF8P55075 233 aaPredicted RBP12□□□□□ -0.49
SSBP4-207ENST00000600244 EXOC3-AS1Q8N2X6 119 aa12□□□□□ -0.49
SSBP4-207ENST00000600244 PRELID1Q9Y255 219 aa12□□□□□ -0.49
SSBP4-207ENST00000600244 TRAV26-1A0A087WT03 109 aa11.99□□□□□ -0.49
SSBP4-207ENST00000600244 A0A0J9YX75 114 aa11.99□□□□□ -0.49
SSBP4-207ENST00000600244 M0R3E3 92 aa11.99□□□□□ -0.49
SSBP4-207ENST00000600244 H2AFB1P0C5Y9 115 aa11.99□□□□□ -0.49
SSBP4-207ENST00000600244 AZU1P20160 251 aa11.99□□□□□ -0.49
SSBP4-207ENST00000600244 RANP62826 216 aaKnown RBP11.99□□□□□ -0.49
SSBP4-207ENST00000600244 SFT2D1Q8WV19 159 aa11.99□□□□□ -0.49
SSBP4-207ENST00000600244 TMPRSS5Q9H3S3 457 aa11.99□□□□□ -0.49
SSBP4-207ENST00000600244 FAM30AQ9NZY2 134 aa11.99□□□□□ -0.49
SSBP4-207ENST00000600244 LRP2P98164 4655 aa11.98□□□□□ -0.49
SSBP4-207ENST00000600244 F6UB75 175 aa11.98□□□□□ -0.49
SSBP4-207ENST00000600244 AMTNQ6UX39 209 aa11.98□□□□□ -0.49
SSBP4-207ENST00000600244 ZNF738Q8NE65 137 aa11.98□□□□□ -0.49
SSBP4-207ENST00000600244 RPUSD4Q96CM3 377 aaKnown RBP11.98□□□□□ -0.49
SSBP4-207ENST00000600244 A0A1W2PRE2 83 aa11.97□□□□□ -0.49
SSBP4-207ENST00000600244 PRAC2D3DTV9 90 aa11.97□□□□□ -0.49
SSBP4-207ENST00000600244 TEX261Q6UWH6 196 aa11.97□□□□□ -0.49
SSBP4-207ENST00000600244 ARL6IP6Q8N6S5 226 aa11.97□□□□□ -0.49
SSBP4-207ENST00000600244 OR8A1Q8NGG7 326 aa11.97□□□□□ -0.49
SSBP4-207ENST00000600244 AAMDCQ9H7C9 122 aa11.97□□□□□ -0.49
SSBP4-207ENST00000600244 OTORQ9NRC9 128 aa11.97□□□□□ -0.49
SSBP4-207ENST00000600244 CRXO43186 299 aaPredicted RBP11.96□□□□□ -0.49
SSBP4-207ENST00000600244 OR5I1Q13606 314 aa11.96□□□□□ -0.49
SSBP4-207ENST00000600244 NFE4Q86UQ8 179 aa11.96□□□□□ -0.49
SSBP4-207ENST00000600244 ZNF680Q8NEM1 530 aa11.96□□□□□ -0.49
SSBP4-207ENST00000600244 LYPD6BQ8NI32 183 aa11.96□□□□□ -0.49
SSBP4-207ENST00000600244 A0A0J9YY99 117 aa11.95□□□□□ -0.5
SSBP4-207ENST00000600244 PGPA6NDG6 321 aa11.95□□□□□ -0.5
SSBP4-207ENST00000600244 GGTLC3B5MD39 225 aa11.95□□□□□ -0.5
SSBP4-207ENST00000600244 H3BNG1 76 aa11.95□□□□□ -0.5
SSBP4-207ENST00000600244 SIVA1O15304 175 aa11.95□□□□□ -0.5
SSBP4-207ENST00000600244 CCL20P78556 96 aa11.95□□□□□ -0.5
SSBP4-207ENST00000600244 EBLN2Q6P2I7 272 aa11.95□□□□□ -0.5
SSBP4-207ENST00000600244 LINC00528Q8N1L1 170 aa11.95□□□□□ -0.5
SSBP4-207ENST00000600244 ARL2-SNX15V9GYD0 113 aa11.95□□□□□ -0.5
SSBP4-207ENST00000600244 FAM74A7A6NL05 159 aa11.94□□□□□ -0.5
SSBP4-207ENST00000600244 DUSP14O95147 198 aaKnown RBP11.94□□□□□ -0.5
SSBP4-207ENST00000600244 CNN1P51911 297 aaKnown RBP11.94□□□□□ -0.5
SSBP4-207ENST00000600244 IQCF2Q8IXL9 164 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms