RNA–Protein interactions for RNA: ENST00000598108.5

IRF3-220, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 1,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-220ENST00000598108 EIF4E3Q8N5X7 224 aaKnown RBP16.08■□□□□ 0.16
IRF3-220ENST00000598108 LINC00612Q8N6U2 182 aa16.08■□□□□ 0.16
IRF3-220ENST00000598108 FAM210BQ96KR6 192 aa16.08■□□□□ 0.16
IRF3-220ENST00000598108 LENEPQ9Y5L5 61 aa16.08■□□□□ 0.16
IRF3-220ENST00000598108 FGF8P55075 233 aaPredicted RBP16.07■□□□□ 0.16
IRF3-220ENST00000598108 ANXA2RQ3ZCQ2 193 aa16.07■□□□□ 0.16
IRF3-220ENST00000598108 TMEM88Q6PEY1 159 aa16.07■□□□□ 0.16
IRF3-220ENST00000598108 SGK494Q96LW2 274 aa16.07■□□□□ 0.16
IRF3-220ENST00000598108 IGHV1OR15-1A0A075B7D0 117 aa16.06■□□□□ 0.16
IRF3-220ENST00000598108 SNURFLB1AK76 121 aa16.06■□□□□ 0.16
IRF3-220ENST00000598108 RGS13O14921 159 aa16.06■□□□□ 0.16
IRF3-220ENST00000598108 BCL2L11O43521 198 aa16.06■□□□□ 0.16
IRF3-220ENST00000598108 TCRAP04437 139 aa16.06■□□□□ 0.16
IRF3-220ENST00000598108 FHITP49789 147 aa16.06■□□□□ 0.16
IRF3-220ENST00000598108 DAZ2Q13117 558 aaKnown RBP16.06■□□□□ 0.16
IRF3-220ENST00000598108 C5orf17Q8NAS9 161 aa16.06■□□□□ 0.16
IRF3-220ENST00000598108 KLF12Q9Y4X4 402 aa16.06■□□□□ 0.16
IRF3-220ENST00000598108 GAGE12BA1L429 117 aa16.05■□□□□ 0.16
IRF3-220ENST00000598108 F5H768 121 aa16.05■□□□□ 0.16
IRF3-220ENST00000598108 GAGE7O76087 117 aa16.05■□□□□ 0.16
IRF3-220ENST00000598108 GAGE12FP0CL80 117 aa16.05■□□□□ 0.16
IRF3-220ENST00000598108 GAGE12GP0CL81 117 aa16.05■□□□□ 0.16
IRF3-220ENST00000598108 GAGE12IP0CL82 117 aa16.05■□□□□ 0.16
IRF3-220ENST00000598108 TMUB2Q71RG4 321 aa16.05■□□□□ 0.16
IRF3-220ENST00000598108 ZNF471Q9BX82 626 aaPredicted RBP16.05■□□□□ 0.16
IRF3-220ENST00000598108 EPDR1Q9UM22 224 aa16.05■□□□□ 0.16
IRF3-220ENST00000598108 KANTRA0A1W2PQU2 76 aa16.04■□□□□ 0.16
IRF3-220ENST00000598108 ATP5G1P05496 136 aa16.04■□□□□ 0.16
IRF3-220ENST00000598108 ATP5G3P48201 142 aa16.04■□□□□ 0.16
IRF3-220ENST00000598108 MUC21Q5SSG8 566 aa16.04■□□□□ 0.16
IRF3-220ENST00000598108 Q6AWC8 147 aa16.04■□□□□ 0.16
IRF3-220ENST00000598108 Q6ZTI0 123 aa16.04■□□□□ 0.16
IRF3-220ENST00000598108 ZNF680Q8NEM1 530 aa16.04■□□□□ 0.16
IRF3-220ENST00000598108 DNAH6Q9C0G6 4158 aa16.04■□□□□ 0.16
IRF3-220ENST00000598108 A0A1W2PRE2 83 aa16.03■□□□□ 0.16
IRF3-220ENST00000598108 UBE2G2P60604 165 aa16.03■□□□□ 0.16
IRF3-220ENST00000598108 TCTE3Q8IZS6 198 aa16.03■□□□□ 0.16
IRF3-220ENST00000598108 MAP1LC3B2A6NCE7 125 aa16.02■□□□□ 0.16
IRF3-220ENST00000598108 F6UZH7 168 aa16.02■□□□□ 0.16
IRF3-220ENST00000598108 IGLV2-11P01706 119 aa16.02■□□□□ 0.16
IRF3-220ENST00000598108 SEC11BP0C7V7 166 aa16.02■□□□□ 0.16
IRF3-220ENST00000598108 MAP1LC3BQ9GZQ8 125 aa16.02■□□□□ 0.16
IRF3-220ENST00000598108 TREM1Q9NP99 234 aa16.02■□□□□ 0.16
IRF3-220ENST00000598108 SERTM2A0A1B0GWG4 89 aa16.01■□□□□ 0.15
IRF3-220ENST00000598108 TCL1AP56279 114 aa16.01■□□□□ 0.15
IRF3-220ENST00000598108 PSG8Q9UQ74 426 aa16.01■□□□□ 0.15
IRF3-220ENST00000598108 FAM74A7A6NL05 159 aa16■□□□□ 0.15
IRF3-220ENST00000598108 LGALSLQ3ZCW2 172 aaPredicted RBP16■□□□□ 0.15
IRF3-220ENST00000598108 IBA57Q5T440 356 aaKnown RBP16■□□□□ 0.15
IRF3-220ENST00000598108 LINC00479Q96M42 142 aa16■□□□□ 0.15
IRF3-220ENST00000598108 MDFICQ9P1T7 246 aa16■□□□□ 0.15
IRF3-220ENST00000598108 hCG_2014768A0A024R1R8 64 aa15.99■□□□□ 0.15
IRF3-220ENST00000598108 SPINK4O60575 86 aa15.99■□□□□ 0.15
IRF3-220ENST00000598108 PFDN1O60925 122 aa15.99■□□□□ 0.15
IRF3-220ENST00000598108 P0DMU3 169 aa15.99■□□□□ 0.15
IRF3-220ENST00000598108 FAM231AP0DMU4 169 aa15.99■□□□□ 0.15
IRF3-220ENST00000598108 FAM231CP0DMU5 169 aa15.99■□□□□ 0.15
IRF3-220ENST00000598108 CYB561D1Q8N8Q1 229 aa15.99■□□□□ 0.15
IRF3-220ENST00000598108 C8orf49Q96NF6 230 aa15.99■□□□□ 0.15
IRF3-220ENST00000598108 ATG101Q9BSB4 218 aa15.99■□□□□ 0.15
IRF3-220ENST00000598108 TRGV1A0A0A0MS02 117 aa15.98■□□□□ 0.15
IRF3-220ENST00000598108 HOXA5P20719 270 aa15.98■□□□□ 0.15
IRF3-220ENST00000598108 POM121L12Q8N7R1 296 aa15.98■□□□□ 0.15
IRF3-220ENST00000598108 FAM213BQ8TBF2 198 aa15.98■□□□□ 0.15
IRF3-220ENST00000598108 EPPK1P58107 5090 aaKnown RBP15.98■□□□□ 0.15
IRF3-220ENST00000598108 TRAV34A0A0B4J273 112 aa15.97■□□□□ 0.15
IRF3-220ENST00000598108 UMAD1C9J7I0 102 aa15.97■□□□□ 0.15
IRF3-220ENST00000598108 K7EQM0 130 aa15.97■□□□□ 0.15
IRF3-220ENST00000598108 IFNA7P01567 189 aa15.97■□□□□ 0.15
IRF3-220ENST00000598108 ZNF80P51504 273 aaPredicted RBP15.97■□□□□ 0.15
IRF3-220ENST00000598108 FLI1Q01543 452 aaPredicted RBP15.97■□□□□ 0.15
IRF3-220ENST00000598108 OR5I1Q13606 314 aa15.97■□□□□ 0.15
IRF3-220ENST00000598108 TMEM183BQ1AE95 376 aa15.97■□□□□ 0.15
IRF3-220ENST00000598108 PRNTQ86SH4 94 aa15.97■□□□□ 0.15
IRF3-220ENST00000598108 TMEM183AQ8IXX5 376 aa15.97■□□□□ 0.15
IRF3-220ENST00000598108 MBD3L1Q8WWY6 194 aa15.97■□□□□ 0.15
IRF3-220ENST00000598108 NAGKQ9UJ70 344 aa15.97■□□□□ 0.15
IRF3-220ENST00000598108 DNAH10Q8IVF4 4471 aa15.96■□□□□ 0.15
IRF3-220ENST00000598108 TRAV21A0A0B4J279 112 aa15.96■□□□□ 0.15
IRF3-220ENST00000598108 GNRH2O43555 120 aa15.96■□□□□ 0.15
IRF3-220ENST00000598108 TDRG1Q3Y452 100 aa15.96■□□□□ 0.15
IRF3-220ENST00000598108 FAM159AQ6UWV7 190 aa15.96■□□□□ 0.15
IRF3-220ENST00000598108 TMEM75Q8N9X5 138 aa15.96■□□□□ 0.15
IRF3-220ENST00000598108 C15orf53Q8NAA6 179 aa15.96■□□□□ 0.15
IRF3-220ENST00000598108 SFT2D1Q8WV19 159 aa15.96■□□□□ 0.15
IRF3-220ENST00000598108 MRPL16Q9NX20 251 aaKnown RBP15.96■□□□□ 0.15
IRF3-220ENST00000598108 TRGV2A0A075B6R0 118 aa15.95■□□□□ 0.14
IRF3-220ENST00000598108 C1QBP02746 253 aa15.95■□□□□ 0.14
IRF3-220ENST00000598108 TPT1P13693 172 aaKnown RBP15.95■□□□□ 0.14
IRF3-220ENST00000598108 EIF5AP63241 154 aaKnown RBP15.95■□□□□ 0.14
IRF3-220ENST00000598108 ZNF415Q09FC8 603 aa15.95■□□□□ 0.14
IRF3-220ENST00000598108 STOML3Q8TAV4 291 aa15.95■□□□□ 0.14
IRF3-220ENST00000598108 C18orf15Q96N68 181 aa15.95■□□□□ 0.14
IRF3-220ENST00000598108 NDFIP1Q9BT67 221 aa15.95■□□□□ 0.14
IRF3-220ENST00000598108 TRAV26-1A0A087WT03 109 aa15.94■□□□□ 0.14
IRF3-220ENST00000598108 A0A1B0GV50 99 aa15.94■□□□□ 0.14
IRF3-220ENST00000598108 PEX7O00628 323 aa15.94■□□□□ 0.14
IRF3-220ENST00000598108 NUDT3O95989 172 aa15.94■□□□□ 0.14
IRF3-220ENST00000598108 NKX6-2Q9C056 277 aaPredicted RBP15.94■□□□□ 0.14
IRF3-220ENST00000598108 C11orf21Q9P2W6 132 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms