RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 ST6GAL2Q96JF0 529 aa7.73□□□□□ -1.17
SHKBP1-206ENST00000595523 FAM210BQ96KR6 192 aa7.73□□□□□ -1.17
SHKBP1-206ENST00000595523 ARPC5LQ9BPX5 153 aa7.73□□□□□ -1.17
SHKBP1-206ENST00000595523 TMPRSS5Q9H3S3 457 aa7.73□□□□□ -1.17
SHKBP1-206ENST00000595523 LENEPQ9Y5L5 61 aa7.73□□□□□ -1.17
SHKBP1-206ENST00000595523 DNAH17Q9UFH2 4485 aa7.72□□□□□ -1.17
SHKBP1-206ENST00000595523 CTXND1A0A1B0GTU2 59 aa7.72□□□□□ -1.17
SHKBP1-206ENST00000595523 CBY3A6NI87 242 aa7.72□□□□□ -1.17
SHKBP1-206ENST00000595523 ATP5G1P05496 136 aa7.72□□□□□ -1.17
SHKBP1-206ENST00000595523 ATP5G3P48201 142 aa7.72□□□□□ -1.17
SHKBP1-206ENST00000595523 DAZ2Q13117 558 aaKnown RBP7.72□□□□□ -1.17
SHKBP1-206ENST00000595523 Q6AWC8 147 aa7.72□□□□□ -1.17
SHKBP1-206ENST00000595523 Q6ZTI0 123 aa7.72□□□□□ -1.17
SHKBP1-206ENST00000595523 GSN-AS1Q9NRJ2 163 aa7.72□□□□□ -1.17
SHKBP1-206ENST00000595523 TMEM167BQ9NRX6 74 aa7.72□□□□□ -1.17
SHKBP1-206ENST00000595523 HECTD4Q9Y4D8 3996 aa7.71□□□□□ -1.18
SHKBP1-206ENST00000595523 IGHV1OR15-1A0A075B7D0 117 aa7.71□□□□□ -1.18
SHKBP1-206ENST00000595523 GAGE12BA1L429 117 aa7.71□□□□□ -1.18
SHKBP1-206ENST00000595523 SNURFLB1AK76 121 aa7.71□□□□□ -1.18
SHKBP1-206ENST00000595523 RGS13O14921 159 aa7.71□□□□□ -1.18
SHKBP1-206ENST00000595523 BCL2L11O43521 198 aa7.71□□□□□ -1.18
SHKBP1-206ENST00000595523 GAGE7O76087 117 aa7.71□□□□□ -1.18
SHKBP1-206ENST00000595523 IGLV2-11P01706 119 aa7.71□□□□□ -1.18
SHKBP1-206ENST00000595523 TCRAP04437 139 aa7.71□□□□□ -1.18
SHKBP1-206ENST00000595523 GAGE12FP0CL80 117 aa7.71□□□□□ -1.18
SHKBP1-206ENST00000595523 GAGE12GP0CL81 117 aa7.71□□□□□ -1.18
SHKBP1-206ENST00000595523 GAGE12IP0CL82 117 aa7.71□□□□□ -1.18
SHKBP1-206ENST00000595523 FGF8P55075 233 aaPredicted RBP7.71□□□□□ -1.18
SHKBP1-206ENST00000595523 AKR1C8PQ5T2L2 129 aa7.71□□□□□ -1.18
SHKBP1-206ENST00000595523 Q6ZNX1 250 aa7.71□□□□□ -1.18
SHKBP1-206ENST00000595523 C5orf17Q8NAS9 161 aa7.71□□□□□ -1.18
SHKBP1-206ENST00000595523 ZNF680Q8NEM1 530 aa7.71□□□□□ -1.18
SHKBP1-206ENST00000595523 SGK494Q96LW2 274 aa7.71□□□□□ -1.18
SHKBP1-206ENST00000595523 KLF12Q9Y4X4 402 aa7.71□□□□□ -1.18
SHKBP1-206ENST00000595523 A0A0D9SG52 128 aa7.7□□□□□ -1.18
SHKBP1-206ENST00000595523 F5H768 121 aa7.7□□□□□ -1.18
SHKBP1-206ENST00000595523 F6UZH7 168 aa7.7□□□□□ -1.18
SHKBP1-206ENST00000595523 P0DMU3 169 aa7.7□□□□□ -1.18
SHKBP1-206ENST00000595523 FAM231AP0DMU4 169 aa7.7□□□□□ -1.18
SHKBP1-206ENST00000595523 FAM231CP0DMU5 169 aa7.7□□□□□ -1.18
SHKBP1-206ENST00000595523 HOXA5P20719 270 aa7.7□□□□□ -1.18
SHKBP1-206ENST00000595523 FHITP49789 147 aa7.7□□□□□ -1.18
SHKBP1-206ENST00000595523 TCL1AP56279 114 aa7.7□□□□□ -1.18
SHKBP1-206ENST00000595523 SUMO1P63165 101 aaKnown RBP7.7□□□□□ -1.18
SHKBP1-206ENST00000595523 MUC21Q5SSG8 566 aa7.7□□□□□ -1.18
SHKBP1-206ENST00000595523 IBA57Q5T440 356 aaKnown RBP7.7□□□□□ -1.18
SHKBP1-206ENST00000595523 FAT2Q9NYQ8 4349 aa7.7□□□□□ -1.18
SHKBP1-206ENST00000595523 SERTM2A0A1B0GWG4 89 aa7.69□□□□□ -1.18
SHKBP1-206ENST00000595523 A0A1W2PRE2 83 aa7.69□□□□□ -1.18
SHKBP1-206ENST00000595523 MAP1LC3B2A6NCE7 125 aa7.69□□□□□ -1.18
SHKBP1-206ENST00000595523 SPINK4O60575 86 aa7.69□□□□□ -1.18
SHKBP1-206ENST00000595523 SEC11BP0C7V7 166 aa7.69□□□□□ -1.18
SHKBP1-206ENST00000595523 UBE2G2P60604 165 aa7.69□□□□□ -1.18
SHKBP1-206ENST00000595523 IQCF2Q8IXL9 164 aa7.69□□□□□ -1.18
SHKBP1-206ENST00000595523 POM121L12Q8N7R1 296 aa7.69□□□□□ -1.18
SHKBP1-206ENST00000595523 C8orf49Q96NF6 230 aa7.69□□□□□ -1.18
SHKBP1-206ENST00000595523 MAP1LC3BQ9GZQ8 125 aa7.69□□□□□ -1.18
SHKBP1-206ENST00000595523 TREM1Q9NP99 234 aa7.69□□□□□ -1.18
SHKBP1-206ENST00000595523 EPDR1Q9UM22 224 aa7.69□□□□□ -1.18
SHKBP1-206ENST00000595523 TRGV1A0A0A0MS02 117 aa7.68□□□□□ -1.18
SHKBP1-206ENST00000595523 FAM74A7A6NL05 159 aa7.68□□□□□ -1.18
SHKBP1-206ENST00000595523 ZNF80P51504 273 aaPredicted RBP7.68□□□□□ -1.18
SHKBP1-206ENST00000595523 TDRG1Q3Y452 100 aa7.68□□□□□ -1.18
SHKBP1-206ENST00000595523 TMUB2Q71RG4 321 aa7.68□□□□□ -1.18
SHKBP1-206ENST00000595523 TCTE3Q8IZS6 198 aa7.68□□□□□ -1.18
SHKBP1-206ENST00000595523 CYB561D1Q8N8Q1 229 aa7.68□□□□□ -1.18
SHKBP1-206ENST00000595523 C15orf53Q8NAA6 179 aa7.68□□□□□ -1.18
SHKBP1-206ENST00000595523 LINC00479Q96M42 142 aa7.68□□□□□ -1.18
SHKBP1-206ENST00000595523 C18orf15Q96N68 181 aa7.68□□□□□ -1.18
SHKBP1-206ENST00000595523 ATG101Q9BSB4 218 aa7.68□□□□□ -1.18
SHKBP1-206ENST00000595523 ZNF471Q9BX82 626 aaPredicted RBP7.68□□□□□ -1.18
SHKBP1-206ENST00000595523 MRPL16Q9NX20 251 aaKnown RBP7.68□□□□□ -1.18
SHKBP1-206ENST00000595523 MDFICQ9P1T7 246 aa7.68□□□□□ -1.18
SHKBP1-206ENST00000595523 PSG8Q9UQ74 426 aa7.68□□□□□ -1.18
SHKBP1-206ENST00000595523 KANTRA0A1W2PQU2 76 aa7.67□□□□□ -1.18
SHKBP1-206ENST00000595523 TMEM183BQ1AE95 376 aa7.67□□□□□ -1.18
SHKBP1-206ENST00000595523 LGALSLQ3ZCW2 172 aaPredicted RBP7.67□□□□□ -1.18
SHKBP1-206ENST00000595523 TMEM183AQ8IXX5 376 aa7.67□□□□□ -1.18
SHKBP1-206ENST00000595523 TMEM75Q8N9X5 138 aa7.67□□□□□ -1.18
SHKBP1-206ENST00000595523 C11orf21Q9P2W6 132 aa7.67□□□□□ -1.18
SHKBP1-206ENST00000595523 TRAV26-1A0A087WT03 109 aa7.66□□□□□ -1.18
SHKBP1-206ENST00000595523 TRAV34A0A0B4J273 112 aa7.66□□□□□ -1.18
SHKBP1-206ENST00000595523 TRAV21A0A0B4J279 112 aa7.66□□□□□ -1.18
SHKBP1-206ENST00000595523 K7EQM0 130 aa7.66□□□□□ -1.18
SHKBP1-206ENST00000595523 GNRH2O43555 120 aa7.66□□□□□ -1.18
SHKBP1-206ENST00000595523 FLI1Q01543 452 aaPredicted RBP7.66□□□□□ -1.18
SHKBP1-206ENST00000595523 ZNF415Q09FC8 603 aa7.66□□□□□ -1.18
SHKBP1-206ENST00000595523 OR5I1Q13606 314 aa7.66□□□□□ -1.18
SHKBP1-206ENST00000595523 LGALS9BQ3B8N2 356 aa7.66□□□□□ -1.18
SHKBP1-206ENST00000595523 FAM159AQ6UWV7 190 aa7.66□□□□□ -1.18
SHKBP1-206ENST00000595523 STOML3Q8TAV4 291 aa7.66□□□□□ -1.18
SHKBP1-206ENST00000595523 MBD3L1Q8WWY6 194 aa7.66□□□□□ -1.18
SHKBP1-206ENST00000595523 NAGKQ9UJ70 344 aa7.66□□□□□ -1.18
SHKBP1-206ENST00000595523 TRGV2A0A075B6R0 118 aa7.65□□□□□ -1.18
SHKBP1-206ENST00000595523 IGHV3-16A0A0C4DH30 117 aa7.65□□□□□ -1.18
SHKBP1-206ENST00000595523 A0A0J9YY99 117 aa7.65□□□□□ -1.18
SHKBP1-206ENST00000595523 UMAD1C9J7I0 102 aa7.65□□□□□ -1.18
SHKBP1-206ENST00000595523 PEX7O00628 323 aa7.65□□□□□ -1.18
SHKBP1-206ENST00000595523 PFDN1O60925 122 aa7.65□□□□□ -1.18
SHKBP1-206ENST00000595523 NUDT3O95989 172 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 111.8 ms