RNA–Protein interactions for RNA: ENST00000590260.5

DDX39A-212, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 988 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-212ENST00000590260 ZNF345Q14585 488 aa12.78□□□□□ -0.36
DDX39A-212ENST00000590260 Q6AWC8 147 aa12.78□□□□□ -0.36
DDX39A-212ENST00000590260 Q6ZTI0 123 aa12.78□□□□□ -0.36
DDX39A-212ENST00000590260 TMED6Q8WW62 240 aa12.78□□□□□ -0.36
DDX39A-212ENST00000590260 SGK494Q96LW2 274 aa12.78□□□□□ -0.36
DDX39A-212ENST00000590260 LENEPQ9Y5L5 61 aa12.78□□□□□ -0.36
DDX39A-212ENST00000590260 IGHV1OR15-1A0A075B7D0 117 aa12.77□□□□□ -0.37
DDX39A-212ENST00000590260 GAGE12BA1L429 117 aa12.77□□□□□ -0.37
DDX39A-212ENST00000590260 GAGE7O76087 117 aa12.77□□□□□ -0.37
DDX39A-212ENST00000590260 CXorf1O96002 111 aa12.77□□□□□ -0.37
DDX39A-212ENST00000590260 IGLV2-11P01706 119 aa12.77□□□□□ -0.37
DDX39A-212ENST00000590260 ATP5G1P05496 136 aa12.77□□□□□ -0.37
DDX39A-212ENST00000590260 GAGE12FP0CL80 117 aa12.77□□□□□ -0.37
DDX39A-212ENST00000590260 GAGE12GP0CL81 117 aa12.77□□□□□ -0.37
DDX39A-212ENST00000590260 GAGE12IP0CL82 117 aa12.77□□□□□ -0.37
DDX39A-212ENST00000590260 HOXA5P20719 270 aa12.77□□□□□ -0.37
DDX39A-212ENST00000590260 ATP5G3P48201 142 aa12.77□□□□□ -0.37
DDX39A-212ENST00000590260 CTXND1A0A1B0GTU2 59 aa12.76□□□□□ -0.37
DDX39A-212ENST00000590260 SNURFLB1AK76 121 aa12.76□□□□□ -0.37
DDX39A-212ENST00000590260 F5H768 121 aa12.76□□□□□ -0.37
DDX39A-212ENST00000590260 CMTM2Q8TAZ6 248 aa12.76□□□□□ -0.37
DDX39A-212ENST00000590260 ARPC5LQ9BPX5 153 aa12.76□□□□□ -0.37
DDX39A-212ENST00000590260 SPINK4O60575 86 aa12.75□□□□□ -0.37
DDX39A-212ENST00000590260 TCRAP04437 139 aa12.75□□□□□ -0.37
DDX39A-212ENST00000590260 FHITP49789 147 aa12.75□□□□□ -0.37
DDX39A-212ENST00000590260 FGF8P55075 233 aaPredicted RBP12.75□□□□□ -0.37
DDX39A-212ENST00000590260 TCL1AP56279 114 aa12.75□□□□□ -0.37
DDX39A-212ENST00000590260 SUMO1P63165 101 aaKnown RBP12.75□□□□□ -0.37
DDX39A-212ENST00000590260 FAM74A1Q5RGS3 127 aa12.75□□□□□ -0.37
DDX39A-212ENST00000590260 MUC21Q5SSG8 566 aa12.75□□□□□ -0.37
DDX39A-212ENST00000590260 POM121L12Q8N7R1 296 aa12.75□□□□□ -0.37
DDX39A-212ENST00000590260 C5orf17Q8NAS9 161 aa12.75□□□□□ -0.37
DDX39A-212ENST00000590260 ZNF680Q8NEM1 530 aa12.75□□□□□ -0.37
DDX39A-212ENST00000590260 TMEM167BQ9NRX6 74 aa12.75□□□□□ -0.37
DDX39A-212ENST00000590260 F6UZH7 168 aa12.74□□□□□ -0.37
DDX39A-212ENST00000590260 RGS13O14921 159 aa12.74□□□□□ -0.37
DDX39A-212ENST00000590260 P0DMU3 169 aa12.74□□□□□ -0.37
DDX39A-212ENST00000590260 FAM231AP0DMU4 169 aa12.74□□□□□ -0.37
DDX39A-212ENST00000590260 FAM231CP0DMU5 169 aa12.74□□□□□ -0.37
DDX39A-212ENST00000590260 IBA57Q5T440 356 aaKnown RBP12.74□□□□□ -0.37
DDX39A-212ENST00000590260 Q6ZNX1 250 aa12.74□□□□□ -0.37
DDX39A-212ENST00000590260 MDFICQ9P1T7 246 aa12.74□□□□□ -0.37
DDX39A-212ENST00000590260 DNAH17Q9UFH2 4485 aa12.74□□□□□ -0.37
DDX39A-212ENST00000590260 NACAE9PAV3 2078 aa12.74□□□□□ -0.37
DDX39A-212ENST00000590260 FAT2Q9NYQ8 4349 aa12.73□□□□□ -0.37
DDX39A-212ENST00000590260 ZNF80P51504 273 aaPredicted RBP12.73□□□□□ -0.37
DDX39A-212ENST00000590260 C8orf49Q96NF6 230 aa12.73□□□□□ -0.37
DDX39A-212ENST00000590260 EPDR1Q9UM22 224 aa12.73□□□□□ -0.37
DDX39A-212ENST00000590260 A0A1W2PRE2 83 aa12.72□□□□□ -0.37
DDX39A-212ENST00000590260 BCL2L11O43521 198 aa12.72□□□□□ -0.37
DDX39A-212ENST00000590260 AKR1C8PQ5T2L2 129 aa12.72□□□□□ -0.37
DDX39A-212ENST00000590260 LINC00479Q96M42 142 aa12.72□□□□□ -0.37
DDX39A-212ENST00000590260 C18orf15Q96N68 181 aa12.72□□□□□ -0.37
DDX39A-212ENST00000590260 C11orf21Q9P2W6 132 aa12.72□□□□□ -0.37
DDX39A-212ENST00000590260 UBE2G2P60604 165 aa12.71□□□□□ -0.37
DDX39A-212ENST00000590260 IQCF2Q8IXL9 164 aa12.71□□□□□ -0.37
DDX39A-212ENST00000590260 C15orf53Q8NAA6 179 aa12.71□□□□□ -0.37
DDX39A-212ENST00000590260 TREM1Q9NP99 234 aa12.71□□□□□ -0.37
DDX39A-212ENST00000590260 MRPL16Q9NX20 251 aaKnown RBP12.71□□□□□ -0.37
DDX39A-212ENST00000590260 PSG8Q9UQ74 426 aa12.71□□□□□ -0.37
DDX39A-212ENST00000590260 TRGV1A0A0A0MS02 117 aa12.7□□□□□ -0.38
DDX39A-212ENST00000590260 A0A0D9SG52 128 aa12.7□□□□□ -0.38
DDX39A-212ENST00000590260 MAP1LC3B2A6NCE7 125 aa12.7□□□□□ -0.38
DDX39A-212ENST00000590260 FAM74A7A6NL05 159 aa12.7□□□□□ -0.38
DDX39A-212ENST00000590260 TDRG1Q3Y452 100 aa12.7□□□□□ -0.38
DDX39A-212ENST00000590260 MAP1LC3BQ9GZQ8 125 aa12.7□□□□□ -0.38
DDX39A-212ENST00000590260 TRAV26-1A0A087WT03 109 aa12.69□□□□□ -0.38
DDX39A-212ENST00000590260 SERTM2A0A1B0GWG4 89 aa12.69□□□□□ -0.38
DDX39A-212ENST00000590260 GNRH2O43555 120 aa12.69□□□□□ -0.38
DDX39A-212ENST00000590260 SEC11BP0C7V7 166 aa12.69□□□□□ -0.38
DDX39A-212ENST00000590260 TMEM183BQ1AE95 376 aa12.69□□□□□ -0.38
DDX39A-212ENST00000590260 TMUB2Q71RG4 321 aa12.69□□□□□ -0.38
DDX39A-212ENST00000590260 TMEM183AQ8IXX5 376 aa12.69□□□□□ -0.38
DDX39A-212ENST00000590260 CYB561D1Q8N8Q1 229 aa12.69□□□□□ -0.38
DDX39A-212ENST00000590260 VSIG2Q96IQ7 327 aa12.69□□□□□ -0.38
DDX39A-212ENST00000590260 ZNF471Q9BX82 626 aaPredicted RBP12.69□□□□□ -0.38
DDX39A-212ENST00000590260 TRAV34A0A0B4J273 112 aa12.68□□□□□ -0.38
DDX39A-212ENST00000590260 A0A0J9YY99 117 aa12.68□□□□□ -0.38
DDX39A-212ENST00000590260 NUDT3O95989 172 aa12.68□□□□□ -0.38
DDX39A-212ENST00000590260 FLI1Q01543 452 aaPredicted RBP12.68□□□□□ -0.38
DDX39A-212ENST00000590260 OR5I1Q13606 314 aa12.68□□□□□ -0.38
DDX39A-212ENST00000590260 LGALSLQ3ZCW2 172 aaPredicted RBP12.68□□□□□ -0.38
DDX39A-212ENST00000590260 RNF212Q495C1 297 aa12.68□□□□□ -0.38
DDX39A-212ENST00000590260 TCTE3Q8IZS6 198 aa12.68□□□□□ -0.38
DDX39A-212ENST00000590260 TMEM75Q8N9X5 138 aa12.68□□□□□ -0.38
DDX39A-212ENST00000590260 ATG101Q9BSB4 218 aa12.68□□□□□ -0.38
DDX39A-212ENST00000590260 HECTD4Q9Y4D8 3996 aa12.68□□□□□ -0.38
DDX39A-212ENST00000590260 TRAV21A0A0B4J279 112 aa12.67□□□□□ -0.38
DDX39A-212ENST00000590260 IGHV3-16A0A0C4DH30 117 aa12.67□□□□□ -0.38
DDX39A-212ENST00000590260 TYMSP04818 313 aa12.67□□□□□ -0.38
DDX39A-212ENST00000590260 ZNF415Q09FC8 603 aa12.67□□□□□ -0.38
DDX39A-212ENST00000590260 LGALS9BQ3B8N2 356 aa12.67□□□□□ -0.38
DDX39A-212ENST00000590260 FAM159AQ6UWV7 190 aa12.67□□□□□ -0.38
DDX39A-212ENST00000590260 MBD3L1Q8WWY6 194 aa12.67□□□□□ -0.38
DDX39A-212ENST00000590260 NAGKQ9UJ70 344 aa12.67□□□□□ -0.38
DDX39A-212ENST00000590260 IGLV2-18A0A075B6J9 118 aa12.66□□□□□ -0.38
DDX39A-212ENST00000590260 KANTRA0A1W2PQU2 76 aa12.66□□□□□ -0.38
DDX39A-212ENST00000590260 M0R2N4 97 aa12.66□□□□□ -0.38
DDX39A-212ENST00000590260 Q6ZR54 194 aa12.66□□□□□ -0.38
DDX39A-212ENST00000590260 PRNTQ86SH4 94 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms