RNA–Protein interactions for RNA: ENST00000589867.2

MBD1-221, Transcript of methyl-CpG binding domain protein 1, human

TSL 3

Gene MBD1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MBD1-221	ENST00000589867	NACA	E9PAV3	2078 aa		12.16	□□□□□ -0.46
MBD1-221	ENST00000589867	CTXND1	A0A1B0GTU2	59 aa		12.16	□□□□□ -0.46
MBD1-221	ENST00000589867	CBY3	A6NI87	242 aa		12.16	□□□□□ -0.46
MBD1-221	ENST00000589867	CXorf1	O96002	111 aa		12.16	□□□□□ -0.46
MBD1-221	ENST00000589867	DAZ2	Q13117	558 aa	Known RBP	12.16	□□□□□ -0.46
MBD1-221	ENST00000589867		Q6AWC8	147 aa		12.16	□□□□□ -0.46
MBD1-221	ENST00000589867	CCDC28A	Q8IWP9	274 aa		12.16	□□□□□ -0.46
MBD1-221	ENST00000589867	EIF4E3	Q8N5X7	224 aa	Known RBP	12.16	□□□□□ -0.46
MBD1-221	ENST00000589867	ARPC5L	Q9BPX5	153 aa		12.16	□□□□□ -0.46
MBD1-221	ENST00000589867	IGLV2-11	P01706	119 aa		12.15	□□□□□ -0.46
MBD1-221	ENST00000589867	FHIT	P49789	147 aa		12.15	□□□□□ -0.46
MBD1-221	ENST00000589867	FGF8	P55075	233 aa	Predicted RBP	12.15	□□□□□ -0.46
MBD1-221	ENST00000589867		Q6ZTI0	123 aa		12.15	□□□□□ -0.46
MBD1-221	ENST00000589867	CMTM2	Q8TAZ6	248 aa		12.15	□□□□□ -0.46
MBD1-221	ENST00000589867	SGK494	Q96LW2	274 aa		12.15	□□□□□ -0.46
MBD1-221	ENST00000589867	TMEM167B	Q9NRX6	74 aa		12.15	□□□□□ -0.46
MBD1-221	ENST00000589867	KLF12	Q9Y4X4	402 aa		12.15	□□□□□ -0.46
MBD1-221	ENST00000589867	FAT2	Q9NYQ8	4349 aa		12.14	□□□□□ -0.47
MBD1-221	ENST00000589867	IGHV1OR15-1	A0A075B7D0	117 aa		12.14	□□□□□ -0.47
MBD1-221	ENST00000589867	TCRA	P04437	139 aa		12.14	□□□□□ -0.47
MBD1-221	ENST00000589867	SUMO1	P63165	101 aa	Known RBP	12.14	□□□□□ -0.47
MBD1-221	ENST00000589867	FAM74A1	Q5RGS3	127 aa		12.14	□□□□□ -0.47
MBD1-221	ENST00000589867	C5orf17	Q8NAS9	161 aa		12.14	□□□□□ -0.47
MBD1-221	ENST00000589867	GAGE12B	A1L429	117 aa		12.13	□□□□□ -0.47
MBD1-221	ENST00000589867	GAGE7	O76087	117 aa		12.13	□□□□□ -0.47
MBD1-221	ENST00000589867	ATP5G1	P05496	136 aa		12.13	□□□□□ -0.47
MBD1-221	ENST00000589867	GAGE12F	P0CL80	117 aa		12.13	□□□□□ -0.47
MBD1-221	ENST00000589867	GAGE12G	P0CL81	117 aa		12.13	□□□□□ -0.47
MBD1-221	ENST00000589867	GAGE12I	P0CL82	117 aa		12.13	□□□□□ -0.47
MBD1-221	ENST00000589867	HOXA5	P20719	270 aa		12.13	□□□□□ -0.47
MBD1-221	ENST00000589867	ATP5G3	P48201	142 aa		12.13	□□□□□ -0.47
MBD1-221	ENST00000589867	TCL1A	P56279	114 aa		12.13	□□□□□ -0.47
MBD1-221	ENST00000589867	AKR1C8P	Q5T2L2	129 aa		12.13	□□□□□ -0.47
MBD1-221	ENST00000589867		A0A0D9SG52	128 aa		12.12	□□□□□ -0.47
MBD1-221	ENST00000589867	SNURFL	B1AK76	121 aa		12.12	□□□□□ -0.47
MBD1-221	ENST00000589867		F5H768	121 aa		12.12	□□□□□ -0.47
MBD1-221	ENST00000589867	BCL2L11	O43521	198 aa		12.12	□□□□□ -0.47
MBD1-221	ENST00000589867	MUC21	Q5SSG8	566 aa		12.12	□□□□□ -0.47
MBD1-221	ENST00000589867	IBA57	Q5T440	356 aa	Known RBP	12.12	□□□□□ -0.47
MBD1-221	ENST00000589867	ZNF680	Q8NEM1	530 aa		12.12	□□□□□ -0.47
MBD1-221	ENST00000589867	EPDR1	Q9UM22	224 aa		12.12	□□□□□ -0.47
MBD1-221	ENST00000589867		A0A1W2PRE2	83 aa		12.11	□□□□□ -0.47
MBD1-221	ENST00000589867		F6UZH7	168 aa		12.11	□□□□□ -0.47
MBD1-221	ENST00000589867	RGS13	O14921	159 aa		12.11	□□□□□ -0.47
MBD1-221	ENST00000589867	SPINK4	O60575	86 aa		12.11	□□□□□ -0.47
MBD1-221	ENST00000589867	SEC11B	P0C7V7	166 aa		12.11	□□□□□ -0.47
MBD1-221	ENST00000589867	ZNF80	P51504	273 aa	Predicted RBP	12.11	□□□□□ -0.47
MBD1-221	ENST00000589867	TMUB2	Q71RG4	321 aa		12.11	□□□□□ -0.47
MBD1-221	ENST00000589867	TCTE3	Q8IZS6	198 aa		12.11	□□□□□ -0.47
MBD1-221	ENST00000589867	MDFIC	Q9P1T7	246 aa		12.11	□□□□□ -0.47
MBD1-221	ENST00000589867	BIRC6	Q9NR09	4857 aa		12.11	□□□□□ -0.47
MBD1-221	ENST00000589867	MAP1LC3B2	A6NCE7	125 aa		12.1	□□□□□ -0.47
MBD1-221	ENST00000589867	FAM74A7	A6NL05	159 aa		12.1	□□□□□ -0.47
MBD1-221	ENST00000589867	UBE2G2	P60604	165 aa		12.1	□□□□□ -0.47
MBD1-221	ENST00000589867	LGALSL	Q3ZCW2	172 aa	Predicted RBP	12.1	□□□□□ -0.47
MBD1-221	ENST00000589867	POM121L12	Q8N7R1	296 aa		12.1	□□□□□ -0.47
MBD1-221	ENST00000589867	LINC00479	Q96M42	142 aa		12.1	□□□□□ -0.47
MBD1-221	ENST00000589867	C18orf15	Q96N68	181 aa		12.1	□□□□□ -0.47
MBD1-221	ENST00000589867	C8orf49	Q96NF6	230 aa		12.1	□□□□□ -0.47
MBD1-221	ENST00000589867	ZNF471	Q9BX82	626 aa	Predicted RBP	12.1	□□□□□ -0.47
MBD1-221	ENST00000589867	MAP1LC3B	Q9GZQ8	125 aa		12.1	□□□□□ -0.47
MBD1-221	ENST00000589867	TREM1	Q9NP99	234 aa		12.1	□□□□□ -0.47
MBD1-221	ENST00000589867	C11orf21	Q9P2W6	132 aa		12.1	□□□□□ -0.47
MBD1-221	ENST00000589867	PSG8	Q9UQ74	426 aa		12.1	□□□□□ -0.47
MBD1-221	ENST00000589867	SERTM2	A0A1B0GWG4	89 aa		12.09	□□□□□ -0.47
MBD1-221	ENST00000589867		P0DMU3	169 aa		12.09	□□□□□ -0.47
MBD1-221	ENST00000589867	FAM231A	P0DMU4	169 aa		12.09	□□□□□ -0.47
MBD1-221	ENST00000589867	FAM231C	P0DMU5	169 aa		12.09	□□□□□ -0.47
MBD1-221	ENST00000589867	TDRG1	Q3Y452	100 aa		12.09	□□□□□ -0.47
MBD1-221	ENST00000589867	IQCF2	Q8IXL9	164 aa		12.09	□□□□□ -0.47
MBD1-221	ENST00000589867	HECTD4	Q9Y4D8	3996 aa		12.09	□□□□□ -0.47
MBD1-221	ENST00000589867	CYB561D1	Q8N8Q1	229 aa		12.08	□□□□□ -0.48
MBD1-221	ENST00000589867	MBD3L1	Q8WWY6	194 aa		12.08	□□□□□ -0.48
MBD1-221	ENST00000589867	ATG101	Q9BSB4	218 aa		12.08	□□□□□ -0.48
MBD1-221	ENST00000589867	TRGV1	A0A0A0MS02	117 aa		12.07	□□□□□ -0.48
MBD1-221	ENST00000589867	TRAV34	A0A0B4J273	112 aa		12.07	□□□□□ -0.48
MBD1-221	ENST00000589867	KANTR	A0A1W2PQU2	76 aa		12.07	□□□□□ -0.48
MBD1-221	ENST00000589867	GNRH2	O43555	120 aa		12.07	□□□□□ -0.48
MBD1-221	ENST00000589867	FLI1	Q01543	452 aa	Predicted RBP	12.07	□□□□□ -0.48
MBD1-221	ENST00000589867	TMEM75	Q8N9X5	138 aa		12.07	□□□□□ -0.48
MBD1-221	ENST00000589867	C15orf53	Q8NAA6	179 aa		12.07	□□□□□ -0.48
MBD1-221	ENST00000589867	STOML3	Q8TAV4	291 aa		12.07	□□□□□ -0.48
MBD1-221	ENST00000589867	MRPL16	Q9NX20	251 aa	Known RBP	12.07	□□□□□ -0.48
MBD1-221	ENST00000589867	TMEM183B	Q1AE95	376 aa		12.06	□□□□□ -0.48
MBD1-221	ENST00000589867	TMEM183A	Q8IXX5	376 aa		12.06	□□□□□ -0.48
MBD1-221	ENST00000589867	TRAV26-1	A0A087WT03	109 aa		12.05	□□□□□ -0.48
MBD1-221	ENST00000589867	TRAV21	A0A0B4J279	112 aa		12.05	□□□□□ -0.48
MBD1-221	ENST00000589867	IGHV3-16	A0A0C4DH30	117 aa		12.05	□□□□□ -0.48
MBD1-221	ENST00000589867	PEX7	O00628	323 aa		12.05	□□□□□ -0.48
MBD1-221	ENST00000589867	TYMS	P04818	313 aa		12.05	□□□□□ -0.48
MBD1-221	ENST00000589867	OR5I1	Q13606	314 aa		12.05	□□□□□ -0.48
MBD1-221	ENST00000589867	LGALS9B	Q3B8N2	356 aa		12.05	□□□□□ -0.48
MBD1-221	ENST00000589867	PRNT	Q86SH4	94 aa		12.05	□□□□□ -0.48
MBD1-221	ENST00000589867	FAM213B	Q8TBF2	198 aa		12.05	□□□□□ -0.48
MBD1-221	ENST00000589867	VSIG2	Q96IQ7	327 aa		12.05	□□□□□ -0.48
MBD1-221	ENST00000589867	UMAD1	C9J7I0	102 aa		12.04	□□□□□ -0.48
MBD1-221	ENST00000589867	C1QB	P02746	253 aa		12.04	□□□□□ -0.48
MBD1-221	ENST00000589867	ZNF415	Q09FC8	603 aa		12.04	□□□□□ -0.48
MBD1-221	ENST00000589867	RNF212	Q495C1	297 aa		12.04	□□□□□ -0.48
MBD1-221	ENST00000589867	FAM159A	Q6UWV7	190 aa		12.04	□□□□□ -0.48

Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms