RNA–Protein interactions for RNA: ENST00000589285.1

ZNF540-207, Transcript of zinc finger protein 540, humanhuman

Gene ZNF540, Length 3,106 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-207ENST00000589285 OR8I2Q8N0Y5 310 aa2.46□□□□□ -2.02
ZNF540-207ENST00000589285 Q8N6K4 173 aa2.46□□□□□ -2.02
ZNF540-207ENST00000589285 OR4A5Q8NH83 315 aa2.46□□□□□ -2.02
ZNF540-207ENST00000589285 ORAOV1Q8WV07 137 aa2.46□□□□□ -2.02
ZNF540-207ENST00000589285 SMIM8Q96KF7 97 aa2.46□□□□□ -2.02
ZNF540-207ENST00000589285 CIB3Q96Q77 187 aaPredicted RBP2.46□□□□□ -2.02
ZNF540-207ENST00000589285 NPCDR1Q9BY65 106 aa2.46□□□□□ -2.02
ZNF540-207ENST00000589285 CST9LQ9H4G1 147 aa2.46□□□□□ -2.02
ZNF540-207ENST00000589285 FKBP11Q9NYL4 201 aa2.46□□□□□ -2.02
ZNF540-207ENST00000589285 CACFD1Q9UGQ2 172 aa2.46□□□□□ -2.02
ZNF540-207ENST00000589285 SS18L2Q9UHA2 77 aa2.46□□□□□ -2.02
ZNF540-207ENST00000589285 MUC4Q99102 2169 aa2.46□□□□□ -2.02
ZNF540-207ENST00000589285 F6UB75 175 aa2.46□□□□□ -2.02
ZNF540-207ENST00000589285 M0R3E3 92 aa2.46□□□□□ -2.02
ZNF540-207ENST00000589285 COX7A2P2O60397 106 aa2.46□□□□□ -2.02
ZNF540-207ENST00000589285 FSTL3O95633 263 aa2.46□□□□□ -2.02
ZNF540-207ENST00000589285 IGHG2P01859 326 aa2.46□□□□□ -2.02
ZNF540-207ENST00000589285 CRYGBP07316 175 aa2.46□□□□□ -2.02
ZNF540-207ENST00000589285 SFTA3P0C7M3 94 aa2.46□□□□□ -2.02
ZNF540-207ENST00000589285 SLC25A4P12235 298 aa2.46□□□□□ -2.02
ZNF540-207ENST00000589285 TPT1P13693 172 aaKnown RBP2.46□□□□□ -2.02
ZNF540-207ENST00000589285 P2RY1P47900 373 aa2.46□□□□□ -2.02
ZNF540-207ENST00000589285 RPL29P47914 159 aaKnown RBP2.46□□□□□ -2.02
ZNF540-207ENST00000589285 XGP55808 180 aa2.46□□□□□ -2.02
ZNF540-207ENST00000589285 LINC00305Q7Z4B0 112 aa2.46□□□□□ -2.02
ZNF540-207ENST00000589285 HIST3H2BBQ8N257 126 aa2.46□□□□□ -2.02
ZNF540-207ENST00000589285 SMIM20Q8N5G0 67 aa2.46□□□□□ -2.02
ZNF540-207ENST00000589285 RPP25LQ8N5L8 163 aaKnown RBP2.46□□□□□ -2.02
ZNF540-207ENST00000589285 RNF182Q8N6D2 247 aa2.46□□□□□ -2.02
ZNF540-207ENST00000589285 OR10G4Q8NGN3 311 aa2.46□□□□□ -2.02
ZNF540-207ENST00000589285 OR10G9Q8NGN4 311 aa2.46□□□□□ -2.02
ZNF540-207ENST00000589285 OR10G7Q8NGN6 311 aa2.46□□□□□ -2.02
ZNF540-207ENST00000589285 TMEM37Q8WXS4 190 aa2.46□□□□□ -2.02
ZNF540-207ENST00000589285 TMEM190Q8WZ59 177 aa2.46□□□□□ -2.02
ZNF540-207ENST00000589285 IL22RA2Q969J5 263 aa2.46□□□□□ -2.02
ZNF540-207ENST00000589285 ATP5SQ99766 215 aa2.46□□□□□ -2.02
ZNF540-207ENST00000589285 RARRES2Q99969 163 aa2.46□□□□□ -2.02
ZNF540-207ENST00000589285 WFDC10AQ9H1F0 79 aa2.46□□□□□ -2.02
ZNF540-207ENST00000589285 NPVFQ9HCQ7 196 aa2.46□□□□□ -2.02
ZNF540-207ENST00000589285 CYTL1Q9NRR1 136 aa2.46□□□□□ -2.02
ZNF540-207ENST00000589285 TRAV8-1A0A0A6YYK1 113 aa2.45□□□□□ -2.02
ZNF540-207ENST00000589285 ZNF705FA8MVS1 300 aaPredicted RBP2.45□□□□□ -2.02
ZNF540-207ENST00000589285 PPP1R2P9O14990 202 aa2.45□□□□□ -2.02
ZNF540-207ENST00000589285 IGKV1-17P01599 117 aa2.45□□□□□ -2.02
ZNF540-207ENST00000589285 NDUFA6P56556 154 aa2.45□□□□□ -2.02
ZNF540-207ENST00000589285 FXYD7P58549 80 aa2.45□□□□□ -2.02
ZNF540-207ENST00000589285 KRTAP10-3P60369 221 aa2.45□□□□□ -2.02
ZNF540-207ENST00000589285 SLC35B1P78383 322 aa2.45□□□□□ -2.02
ZNF540-207ENST00000589285 KHDC3LQ587J8 217 aa2.45□□□□□ -2.02
ZNF540-207ENST00000589285 TMEM14EPQ6UXP3 125 aa2.45□□□□□ -2.02
ZNF540-207ENST00000589285 ZNF705AQ6ZN79 300 aaPredicted RBP2.45□□□□□ -2.02
ZNF540-207ENST00000589285 LINC01551Q86U37 167 aa2.45□□□□□ -2.02
ZNF540-207ENST00000589285 EXOC3-AS1Q8N2X6 119 aa2.45□□□□□ -2.02
ZNF540-207ENST00000589285 NPBQ8NG41 125 aa2.45□□□□□ -2.02
ZNF540-207ENST00000589285 OR1P1Q8NH06 330 aa2.45□□□□□ -2.02
ZNF540-207ENST00000589285 LINC00479Q96M42 142 aa2.45□□□□□ -2.02
ZNF540-207ENST00000589285 TMEM147Q9BVK8 224 aa2.45□□□□□ -2.02
ZNF540-207ENST00000589285 GGTLC1Q9BX51 225 aa2.45□□□□□ -2.02
ZNF540-207ENST00000589285 WDR61Q9GZS3 305 aaKnown RBP2.45□□□□□ -2.02
ZNF540-207ENST00000589285 SLC39A9Q9NUM3 307 aa2.45□□□□□ -2.02
ZNF540-207ENST00000589285 THYN1Q9P016 225 aa2.45□□□□□ -2.02
ZNF540-207ENST00000589285 IGHV3OR16-12A0A075B7B8 117 aa2.45□□□□□ -2.02
ZNF540-207ENST00000589285 MUC21A0A0G2JKD1 596 aa2.45□□□□□ -2.02
ZNF540-207ENST00000589285 MUC21A0A140T8X8 626 aa2.45□□□□□ -2.02
ZNF540-207ENST00000589285 KRTAP16-1A8MUX0 517 aa2.45□□□□□ -2.02
ZNF540-207ENST00000589285 ZNF705GA8MUZ8 300 aaPredicted RBP2.45□□□□□ -2.02
ZNF540-207ENST00000589285 OOSP1A8MZH6 123 aa2.45□□□□□ -2.02
ZNF540-207ENST00000589285 OR11H12B2RN74 326 aa2.45□□□□□ -2.02
ZNF540-207ENST00000589285 CTSGP08311 255 aa2.45□□□□□ -2.02
ZNF540-207ENST00000589285 ARL14EPLP0DKL9 152 aa2.45□□□□□ -2.02
ZNF540-207ENST00000589285 RPL32P62910 135 aaKnown RBP2.45□□□□□ -2.02
ZNF540-207ENST00000589285 GNG5P63218 68 aa2.45□□□□□ -2.02
ZNF540-207ENST00000589285 ZNF266Q14584 549 aa2.45□□□□□ -2.02
ZNF540-207ENST00000589285 MUC21Q5SSG8 566 aa2.45□□□□□ -2.02
ZNF540-207ENST00000589285 TOMM20LQ6UXN7 152 aa2.45□□□□□ -2.02
ZNF540-207ENST00000589285 C12orf54Q6X4T0 127 aa2.45□□□□□ -2.02
ZNF540-207ENST00000589285 TCTEX1D1Q8N7M0 179 aa2.45□□□□□ -2.02
ZNF540-207ENST00000589285 C8orf31Q8N9H6 132 aa2.45□□□□□ -2.02
ZNF540-207ENST00000589285 OR11H2Q8NH07 326 aa2.45□□□□□ -2.02
ZNF540-207ENST00000589285 DLX4Q92988 240 aaPredicted RBP2.45□□□□□ -2.02
ZNF540-207ENST00000589285 AQP10Q96PS8 301 aa2.45□□□□□ -2.02
ZNF540-207ENST00000589285 C19orf24Q9BVV8 132 aa2.45□□□□□ -2.02
ZNF540-207ENST00000589285 IGLV11-55A0A075B6I3 123 aa2.44□□□□□ -2.02
ZNF540-207ENST00000589285 DUXBA0A1W2PPF3 345 aa2.44□□□□□ -2.02
ZNF540-207ENST00000589285 MAP1LC3B2A6NCE7 125 aa2.44□□□□□ -2.02
ZNF540-207ENST00000589285 IZUMO1RA6ND01 250 aa2.44□□□□□ -2.02
ZNF540-207ENST00000589285 I3L2K1 104 aa2.44□□□□□ -2.02
ZNF540-207ENST00000589285 CORTO00230 105 aa2.44□□□□□ -2.02
ZNF540-207ENST00000589285 PRM2P04554 102 aa2.44□□□□□ -2.02
ZNF540-207ENST00000589285 ZNF688P0C7X2 276 aa2.44□□□□□ -2.02
ZNF540-207ENST00000589285 IGLC1P0CG04 106 aa2.44□□□□□ -2.02
ZNF540-207ENST00000589285 UBE2L3P68036 154 aaKnown RBP2.44□□□□□ -2.02
ZNF540-207ENST00000589285 EBI3Q14213 229 aa2.44□□□□□ -2.02
ZNF540-207ENST00000589285 JOSD1Q15040 202 aaPredicted RBP2.44□□□□□ -2.02
ZNF540-207ENST00000589285 RHEBQ15382 184 aa2.44□□□□□ -2.02
ZNF540-207ENST00000589285 POU2AF1Q16633 256 aa2.44□□□□□ -2.02
ZNF540-207ENST00000589285 OR4B1Q8NGF8 309 aa2.44□□□□□ -2.02
ZNF540-207ENST00000589285 RNASEH2CQ8TDP1 164 aaKnown RBP2.44□□□□□ -2.02
ZNF540-207ENST00000589285 DERL1Q9BUN8 251 aa2.44□□□□□ -2.02
ZNF540-207ENST00000589285 ACTR3CQ9C0K3 210 aaPredicted RBP2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms