RNA–Protein interactions for RNA: ENST00000588423.1

RETREG3-206, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 559 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-206ENST00000588423 NOP10Q9NPE3 64 aaKnown RBP11.38□□□□□ -0.59
RETREG3-206ENST00000588423 CBY3A6NI87 242 aa11.37□□□□□ -0.59
RETREG3-206ENST00000588423 DEFB130BP0DP73 79 aa11.37□□□□□ -0.59
RETREG3-206ENST00000588423 DEFB130AP0DP74 79 aa11.37□□□□□ -0.59
RETREG3-206ENST00000588423 DAZ2Q13117 558 aaKnown RBP11.37□□□□□ -0.59
RETREG3-206ENST00000588423 GOLT1AQ6ZVE7 132 aa11.37□□□□□ -0.59
RETREG3-206ENST00000588423 LINC00612Q8N6U2 182 aa11.37□□□□□ -0.59
RETREG3-206ENST00000588423 A0A1W2PRE2 83 aa11.36□□□□□ -0.59
RETREG3-206ENST00000588423 SNURFLB1AK76 121 aa11.36□□□□□ -0.59
RETREG3-206ENST00000588423 SEC11BP0C7V7 166 aa11.36□□□□□ -0.59
RETREG3-206ENST00000588423 EIF5AP63241 154 aaKnown RBP11.36□□□□□ -0.59
RETREG3-206ENST00000588423 Q6AWC8 147 aa11.36□□□□□ -0.59
RETREG3-206ENST00000588423 STOML3Q8TAV4 291 aa11.36□□□□□ -0.59
RETREG3-206ENST00000588423 ZNF471Q9BX82 626 aaPredicted RBP11.36□□□□□ -0.59
RETREG3-206ENST00000588423 RPH3ALQ9UNE2 315 aa11.36□□□□□ -0.59
RETREG3-206ENST00000588423 GGTLC3B5MD39 225 aa11.35□□□□□ -0.59
RETREG3-206ENST00000588423 K7EQM0 130 aa11.35□□□□□ -0.59
RETREG3-206ENST00000588423 RGS13O14921 159 aa11.35□□□□□ -0.59
RETREG3-206ENST00000588423 TCRAP04437 139 aa11.35□□□□□ -0.59
RETREG3-206ENST00000588423 ATP5G1P05496 136 aa11.35□□□□□ -0.59
RETREG3-206ENST00000588423 ATP5G3P48201 142 aa11.35□□□□□ -0.59
RETREG3-206ENST00000588423 GNG5P63218 68 aa11.35□□□□□ -0.59
RETREG3-206ENST00000588423 IBA57Q5T440 356 aaKnown RBP11.35□□□□□ -0.59
RETREG3-206ENST00000588423 SLC51BQ86UW2 128 aa11.35□□□□□ -0.59
RETREG3-206ENST00000588423 C11orf72Q8NBR9 251 aa11.35□□□□□ -0.59
RETREG3-206ENST00000588423 IGHV1OR15-1A0A075B7D0 117 aa11.34□□□□□ -0.59
RETREG3-206ENST00000588423 UMAD1C9J7I0 102 aa11.34□□□□□ -0.59
RETREG3-206ENST00000588423 HTN3P15516 51 aa11.34□□□□□ -0.59
RETREG3-206ENST00000588423 SUMO1P63165 101 aaKnown RBP11.34□□□□□ -0.59
RETREG3-206ENST00000588423 NKX6-2Q9C056 277 aaPredicted RBP11.34□□□□□ -0.59
RETREG3-206ENST00000588423 EPDR1Q9UM22 224 aa11.34□□□□□ -0.59
RETREG3-206ENST00000588423 MAP1LC3B2A6NCE7 125 aa11.33□□□□□ -0.6
RETREG3-206ENST00000588423 FBLL1A6NHQ2 334 aaKnown RBP11.33□□□□□ -0.6
RETREG3-206ENST00000588423 TPT1P13693 172 aaKnown RBP11.33□□□□□ -0.6
RETREG3-206ENST00000588423 IQCF2Q8IXL9 164 aa11.33□□□□□ -0.6
RETREG3-206ENST00000588423 MAP1LC3BQ9GZQ8 125 aa11.33□□□□□ -0.6
RETREG3-206ENST00000588423 TRAV8-1A0A0A6YYK1 113 aa11.32□□□□□ -0.6
RETREG3-206ENST00000588423 P0DMU3 169 aa11.32□□□□□ -0.6
RETREG3-206ENST00000588423 FAM231AP0DMU4 169 aa11.32□□□□□ -0.6
RETREG3-206ENST00000588423 FAM231CP0DMU5 169 aa11.32□□□□□ -0.6
RETREG3-206ENST00000588423 FGF8P55075 233 aaPredicted RBP11.32□□□□□ -0.6
RETREG3-206ENST00000588423 TCL1AP56279 114 aa11.32□□□□□ -0.6
RETREG3-206ENST00000588423 TMEM88Q6PEY1 159 aa11.32□□□□□ -0.6
RETREG3-206ENST00000588423 DPPA3Q6W0C5 159 aa11.32□□□□□ -0.6
RETREG3-206ENST00000588423 Q6ZQT7 251 aa11.32□□□□□ -0.6
RETREG3-206ENST00000588423 CYB561D1Q8N8Q1 229 aa11.32□□□□□ -0.6
RETREG3-206ENST00000588423 TMEM75Q8N9X5 138 aa11.32□□□□□ -0.6
RETREG3-206ENST00000588423 C15orf53Q8NAA6 179 aa11.32□□□□□ -0.6
RETREG3-206ENST00000588423 TVP23CQ96ET8 276 aa11.32□□□□□ -0.6
RETREG3-206ENST00000588423 C18orf15Q96N68 181 aa11.32□□□□□ -0.6
RETREG3-206ENST00000588423 ATG101Q9BSB4 218 aa11.32□□□□□ -0.6
RETREG3-206ENST00000588423 NDFIP1Q9BT67 221 aa11.32□□□□□ -0.6
RETREG3-206ENST00000588423 TMPRSS5Q9H3S3 457 aa11.32□□□□□ -0.6
RETREG3-206ENST00000588423 TREM1Q9NP99 234 aa11.32□□□□□ -0.6
RETREG3-206ENST00000588423 GSN-AS1Q9NRJ2 163 aa11.32□□□□□ -0.6
RETREG3-206ENST00000588423 BOLA1Q9Y3E2 137 aa11.32□□□□□ -0.6
RETREG3-206ENST00000588423 TP53TG3Q9ULZ0 132 aa11.31□□□□□ -0.6
RETREG3-206ENST00000588423 ARL2-SNX15V9GYD0 113 aa11.31□□□□□ -0.6
RETREG3-206ENST00000588423 TRAV21A0A0B4J279 112 aa11.3□□□□□ -0.6
RETREG3-206ENST00000588423 GAGE12BA1L429 117 aa11.3□□□□□ -0.6
RETREG3-206ENST00000588423 FAM74A7A6NL05 159 aa11.3□□□□□ -0.6
RETREG3-206ENST00000588423 F5H768 121 aa11.3□□□□□ -0.6
RETREG3-206ENST00000588423 SPINK4O60575 86 aa11.3□□□□□ -0.6
RETREG3-206ENST00000588423 GAGE7O76087 117 aa11.3□□□□□ -0.6
RETREG3-206ENST00000588423 IGLV2-11P01706 119 aa11.3□□□□□ -0.6
RETREG3-206ENST00000588423 GAGE12FP0CL80 117 aa11.3□□□□□ -0.6
RETREG3-206ENST00000588423 GAGE12GP0CL81 117 aa11.3□□□□□ -0.6
RETREG3-206ENST00000588423 GAGE12IP0CL82 117 aa11.3□□□□□ -0.6
RETREG3-206ENST00000588423 TDRG1Q3Y452 100 aa11.3□□□□□ -0.6
RETREG3-206ENST00000588423 FAM159AQ6UWV7 190 aa11.3□□□□□ -0.6
RETREG3-206ENST00000588423 MBD3L1Q8WWY6 194 aa11.3□□□□□ -0.6
RETREG3-206ENST00000588423 PSG8Q9UQ74 426 aa11.3□□□□□ -0.6
RETREG3-206ENST00000588423 KLF12Q9Y4X4 402 aa11.3□□□□□ -0.6
RETREG3-206ENST00000588423 FHITP49789 147 aa11.29□□□□□ -0.6
RETREG3-206ENST00000588423 UBE2G2P60604 165 aa11.29□□□□□ -0.6
RETREG3-206ENST00000588423 FLI1Q01543 452 aaPredicted RBP11.29□□□□□ -0.6
RETREG3-206ENST00000588423 ZNF415Q09FC8 603 aa11.29□□□□□ -0.6
RETREG3-206ENST00000588423 LGALS9BQ3B8N2 356 aa11.29□□□□□ -0.6
RETREG3-206ENST00000588423 EIF5AL1Q6IS14 154 aaKnown RBP11.29□□□□□ -0.6
RETREG3-206ENST00000588423 HIST1H2BAQ96A08 127 aa11.29□□□□□ -0.6
RETREG3-206ENST00000588423 TCEAL7Q9BRU2 100 aa11.29□□□□□ -0.6
RETREG3-206ENST00000588423 TRGV11A0A075B6L2 103 aa11.28□□□□□ -0.6
RETREG3-206ENST00000588423 F6UZH7 168 aa11.28□□□□□ -0.6
RETREG3-206ENST00000588423 IFNA7P01567 189 aa11.28□□□□□ -0.6
RETREG3-206ENST00000588423 MUC21Q5SSG8 566 aa11.28□□□□□ -0.6
RETREG3-206ENST00000588423 SAPCD1Q5SSQ6 148 aa11.28□□□□□ -0.6
RETREG3-206ENST00000588423 Q6ZTI0 123 aa11.28□□□□□ -0.6
RETREG3-206ENST00000588423 FAM213BQ8TBF2 198 aa11.28□□□□□ -0.6
RETREG3-206ENST00000588423 SGK494Q96LW2 274 aa11.28□□□□□ -0.6
RETREG3-206ENST00000588423 TRGV1A0A0A0MS02 117 aa11.27□□□□□ -0.61
RETREG3-206ENST00000588423 PEX7O00628 323 aa11.27□□□□□ -0.61
RETREG3-206ENST00000588423 PPT1P50897 306 aa11.27□□□□□ -0.61
RETREG3-206ENST00000588423 POM121L12Q8N7R1 296 aa11.27□□□□□ -0.61
RETREG3-206ENST00000588423 SFT2D1Q8WV19 159 aa11.27□□□□□ -0.61
RETREG3-206ENST00000588423 TRGV2A0A075B6R0 118 aa11.26□□□□□ -0.61
RETREG3-206ENST00000588423 RAB5CP51148 216 aa11.26□□□□□ -0.61
RETREG3-206ENST00000588423 TMEM183BQ1AE95 376 aa11.26□□□□□ -0.61
RETREG3-206ENST00000588423 RNF212Q495C1 297 aa11.26□□□□□ -0.61
RETREG3-206ENST00000588423 SMUG1Q53HV7 270 aa11.26□□□□□ -0.61
RETREG3-206ENST00000588423 PRNTQ86SH4 94 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms