RNA–Protein interactions for RNA: ENST00000588230.5

CIRBP-217, Transcript of cold inducible RNA binding protein, humanhuman

TSL 5 BASIC

Gene CIRBP, Length 1,013 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-217ENST00000588230 C5orf17Q8NAS9 161 aa13.59□□□□□ -0.23
CIRBP-217ENST00000588230 ZNF680Q8NEM1 530 aa13.59□□□□□ -0.23
CIRBP-217ENST00000588230 SUMO1P63165 101 aaKnown RBP13.58□□□□□ -0.24
CIRBP-217ENST00000588230 ZNF471Q9BX82 626 aaPredicted RBP13.58□□□□□ -0.24
CIRBP-217ENST00000588230 IGHV1OR15-1A0A075B7D0 117 aa13.57□□□□□ -0.24
CIRBP-217ENST00000588230 F5H768 121 aa13.57□□□□□ -0.24
CIRBP-217ENST00000588230 BCL2L11O43521 198 aa13.57□□□□□ -0.24
CIRBP-217ENST00000588230 ATP5G1P05496 136 aa13.57□□□□□ -0.24
CIRBP-217ENST00000588230 ATP5G3P48201 142 aa13.57□□□□□ -0.24
CIRBP-217ENST00000588230 ANXA2RQ3ZCQ2 193 aa13.57□□□□□ -0.24
CIRBP-217ENST00000588230 Q6ZNX1 250 aa13.57□□□□□ -0.24
CIRBP-217ENST00000588230 GSN-AS1Q9NRJ2 163 aa13.57□□□□□ -0.24
CIRBP-217ENST00000588230 TRAV8-1A0A0A6YYK1 113 aa13.56□□□□□ -0.24
CIRBP-217ENST00000588230 SERTM2A0A1B0GWG4 89 aa13.56□□□□□ -0.24
CIRBP-217ENST00000588230 K7EQM0 130 aa13.56□□□□□ -0.24
CIRBP-217ENST00000588230 PFDN1O60925 122 aa13.56□□□□□ -0.24
CIRBP-217ENST00000588230 TCRAP04437 139 aa13.56□□□□□ -0.24
CIRBP-217ENST00000588230 DAZ2Q13117 558 aaKnown RBP13.56□□□□□ -0.24
CIRBP-217ENST00000588230 TMEM88Q6PEY1 159 aa13.56□□□□□ -0.24
CIRBP-217ENST00000588230 Q6ZQT7 251 aa13.56□□□□□ -0.24
CIRBP-217ENST00000588230 TMPRSS5Q9H3S3 457 aa13.56□□□□□ -0.24
CIRBP-217ENST00000588230 A0A1W2PRE2 83 aa13.55□□□□□ -0.24
CIRBP-217ENST00000588230 GAGE12BA1L429 117 aa13.55□□□□□ -0.24
CIRBP-217ENST00000588230 MAP1LC3B2A6NCE7 125 aa13.55□□□□□ -0.24
CIRBP-217ENST00000588230 GGTLC3B5MD39 225 aa13.55□□□□□ -0.24
CIRBP-217ENST00000588230 GAGE7O76087 117 aa13.55□□□□□ -0.24
CIRBP-217ENST00000588230 GAGE12FP0CL80 117 aa13.55□□□□□ -0.24
CIRBP-217ENST00000588230 GAGE12GP0CL81 117 aa13.55□□□□□ -0.24
CIRBP-217ENST00000588230 GAGE12IP0CL82 117 aa13.55□□□□□ -0.24
CIRBP-217ENST00000588230 FGF8P55075 233 aaPredicted RBP13.55□□□□□ -0.24
CIRBP-217ENST00000588230 EIF5AP63241 154 aaKnown RBP13.55□□□□□ -0.24
CIRBP-217ENST00000588230 C11orf72Q8NBR9 251 aa13.55□□□□□ -0.24
CIRBP-217ENST00000588230 MAP1LC3BQ9GZQ8 125 aa13.55□□□□□ -0.24
CIRBP-217ENST00000588230 EPDR1Q9UM22 224 aa13.55□□□□□ -0.24
CIRBP-217ENST00000588230 SEC11BP0C7V7 166 aa13.54□□□□□ -0.24
CIRBP-217ENST00000588230 P0DMU3 169 aa13.54□□□□□ -0.24
CIRBP-217ENST00000588230 FAM231AP0DMU4 169 aa13.54□□□□□ -0.24
CIRBP-217ENST00000588230 FAM231CP0DMU5 169 aa13.54□□□□□ -0.24
CIRBP-217ENST00000588230 MUC21Q5SSG8 566 aa13.54□□□□□ -0.24
CIRBP-217ENST00000588230 Q6AWC8 147 aa13.54□□□□□ -0.24
CIRBP-217ENST00000588230 TMUB2Q71RG4 321 aa13.54□□□□□ -0.24
CIRBP-217ENST00000588230 LINC00612Q8N6U2 182 aa13.54□□□□□ -0.24
CIRBP-217ENST00000588230 STOML3Q8TAV4 291 aa13.54□□□□□ -0.24
CIRBP-217ENST00000588230 SGK494Q96LW2 274 aa13.54□□□□□ -0.24
CIRBP-217ENST00000588230 NDFIP1Q9BT67 221 aa13.54□□□□□ -0.24
CIRBP-217ENST00000588230 TREM1Q9NP99 234 aa13.54□□□□□ -0.24
CIRBP-217ENST00000588230 TP53TG3Q9ULZ0 132 aa13.54□□□□□ -0.24
CIRBP-217ENST00000588230 UBE2G2P60604 165 aa13.53□□□□□ -0.24
CIRBP-217ENST00000588230 IBA57Q5T440 356 aaKnown RBP13.53□□□□□ -0.24
CIRBP-217ENST00000588230 Q6ZTI0 123 aa13.53□□□□□ -0.24
CIRBP-217ENST00000588230 TCTE3Q8IZS6 198 aa13.53□□□□□ -0.24
CIRBP-217ENST00000588230 KLF12Q9Y4X4 402 aa13.53□□□□□ -0.24
CIRBP-217ENST00000588230 UMAD1C9J7I0 102 aa13.52□□□□□ -0.25
CIRBP-217ENST00000588230 IFNA7P01567 189 aa13.52□□□□□ -0.25
CIRBP-217ENST00000588230 FHITP49789 147 aa13.52□□□□□ -0.25
CIRBP-217ENST00000588230 TCL1AP56279 114 aa13.52□□□□□ -0.25
CIRBP-217ENST00000588230 FAM159AQ6UWV7 190 aa13.52□□□□□ -0.25
CIRBP-217ENST00000588230 CYB561D1Q8N8Q1 229 aa13.52□□□□□ -0.25
CIRBP-217ENST00000588230 TVP23CQ96ET8 276 aa13.52□□□□□ -0.25
CIRBP-217ENST00000588230 TRGV1A0A0A0MS02 117 aa13.51□□□□□ -0.25
CIRBP-217ENST00000588230 F6UZH7 168 aa13.51□□□□□ -0.25
CIRBP-217ENST00000588230 TPT1P13693 172 aaKnown RBP13.51□□□□□ -0.25
CIRBP-217ENST00000588230 FLI1Q01543 452 aaPredicted RBP13.51□□□□□ -0.25
CIRBP-217ENST00000588230 C15orf53Q8NAA6 179 aa13.51□□□□□ -0.25
CIRBP-217ENST00000588230 FAM213BQ8TBF2 198 aa13.51□□□□□ -0.25
CIRBP-217ENST00000588230 ATG101Q9BSB4 218 aa13.51□□□□□ -0.25
CIRBP-217ENST00000588230 NKX6-2Q9C056 277 aaPredicted RBP13.51□□□□□ -0.25
CIRBP-217ENST00000588230 NAGKQ9UJ70 344 aa13.51□□□□□ -0.25
CIRBP-217ENST00000588230 PSG8Q9UQ74 426 aa13.51□□□□□ -0.25
CIRBP-217ENST00000588230 HECTD4Q9Y4D8 3996 aa13.5□□□□□ -0.25
CIRBP-217ENST00000588230 TRGV2A0A075B6R0 118 aa13.5□□□□□ -0.25
CIRBP-217ENST00000588230 TRAV21A0A0B4J279 112 aa13.5□□□□□ -0.25
CIRBP-217ENST00000588230 FBLL1A6NHQ2 334 aaKnown RBP13.5□□□□□ -0.25
CIRBP-217ENST00000588230 ZNF415Q09FC8 603 aa13.5□□□□□ -0.25
CIRBP-217ENST00000588230 OR5I1Q13606 314 aa13.5□□□□□ -0.25
CIRBP-217ENST00000588230 PRNTQ86SH4 94 aa13.5□□□□□ -0.25
CIRBP-217ENST00000588230 POM121L12Q8N7R1 296 aa13.5□□□□□ -0.25
CIRBP-217ENST00000588230 hCG_2014768A0A024R1R8 64 aa13.49□□□□□ -0.25
CIRBP-217ENST00000588230 FAM74A7A6NL05 159 aa13.49□□□□□ -0.25
CIRBP-217ENST00000588230 TMEM183BQ1AE95 376 aa13.49□□□□□ -0.25
CIRBP-217ENST00000588230 UBE2DNLQ8IWF7 75 aa13.49□□□□□ -0.25
CIRBP-217ENST00000588230 TMEM183AQ8IXX5 376 aa13.49□□□□□ -0.25
CIRBP-217ENST00000588230 TMEM75Q8N9X5 138 aa13.49□□□□□ -0.25
CIRBP-217ENST00000588230 SFT2D1Q8WV19 159 aa13.49□□□□□ -0.25
CIRBP-217ENST00000588230 TRGV11A0A075B6L2 103 aa13.48□□□□□ -0.25
CIRBP-217ENST00000588230 SPINK4O60575 86 aa13.48□□□□□ -0.25
CIRBP-217ENST00000588230 IGLV2-11P01706 119 aa13.48□□□□□ -0.25
CIRBP-217ENST00000588230 PPT1P50897 306 aa13.48□□□□□ -0.25
CIRBP-217ENST00000588230 LGALSLQ3ZCW2 172 aaPredicted RBP13.48□□□□□ -0.25
CIRBP-217ENST00000588230 DPPA3Q6W0C5 159 aa13.48□□□□□ -0.25
CIRBP-217ENST00000588230 DNAH2Q9P225 4427 aa13.48□□□□□ -0.25
CIRBP-217ENST00000588230 NUDT3O95989 172 aa13.47□□□□□ -0.25
CIRBP-217ENST00000588230 C1QBP02746 253 aa13.47□□□□□ -0.25
CIRBP-217ENST00000588230 LGALS9BQ3B8N2 356 aa13.47□□□□□ -0.25
CIRBP-217ENST00000588230 TDRG1Q3Y452 100 aa13.47□□□□□ -0.25
CIRBP-217ENST00000588230 ZFP69Q49AA0 526 aa13.47□□□□□ -0.25
CIRBP-217ENST00000588230 SAPCD1Q5SSQ6 148 aa13.47□□□□□ -0.25
CIRBP-217ENST00000588230 CST9LP1Q5W188 147 aa13.47□□□□□ -0.25
CIRBP-217ENST00000588230 AKAP14Q86UN6 197 aa13.47□□□□□ -0.25
CIRBP-217ENST00000588230 MBD3L1Q8WWY6 194 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms