RNA–Protein interactions for RNA: ENST00000585395.6

LSM7-202, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM7, Length 621 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-202ENST00000585395 BLOC1S1P78537 153 aa16.66■□□□□ 0.26
LSM7-202ENST00000585395 CEMP1Q6PRD7 247 aaPredicted RBP16.66■□□□□ 0.26
LSM7-202ENST00000585395 PHLDA1Q8WV24 401 aaPredicted RBP16.66■□□□□ 0.26
LSM7-202ENST00000585395 KLLNB2CW77 178 aa16.65■□□□□ 0.26
LSM7-202ENST00000585395 ALKAL2Q6UX46 152 aa16.65■□□□□ 0.26
LSM7-202ENST00000585395 TEX48A0A1B0GUV7 120 aa16.64■□□□□ 0.25
LSM7-202ENST00000585395 PAGE4O60829 102 aa16.64■□□□□ 0.25
LSM7-202ENST00000585395 CCDC28AQ8IWP9 274 aa16.64■□□□□ 0.25
LSM7-202ENST00000585395 TMEM75Q8N9X5 138 aa16.64■□□□□ 0.25
LSM7-202ENST00000585395 Q8TAT8 98 aa16.64■□□□□ 0.25
LSM7-202ENST00000585395 TXNDC17Q9BRA2 123 aa16.64■□□□□ 0.25
LSM7-202ENST00000585395 PYGO2Q9BRQ0 406 aa16.64■□□□□ 0.25
LSM7-202ENST00000585395 BOLA1Q9Y3E2 137 aa16.64■□□□□ 0.25
LSM7-202ENST00000585395 TRAV12-3A0A0B4J271 114 aa16.63■□□□□ 0.25
LSM7-202ENST00000585395 LOC102723971A0A1B0GUV8 181 aa16.63■□□□□ 0.25
LSM7-202ENST00000585395 PEX7O00628 323 aa16.63■□□□□ 0.25
LSM7-202ENST00000585395 RNASE4P34096 147 aaKnown RBP16.63■□□□□ 0.25
LSM7-202ENST00000585395 LINC00476Q8WZB0 136 aa16.63■□□□□ 0.25
LSM7-202ENST00000585395 TAGLN2P37802 199 aaKnown RBP16.62■□□□□ 0.25
LSM7-202ENST00000585395 FLI1Q01543 452 aaPredicted RBP16.62■□□□□ 0.25
LSM7-202ENST00000585395 SAPCD1Q5SSQ6 148 aa16.62■□□□□ 0.25
LSM7-202ENST00000585395 ZNF493Q6ZR52 646 aa16.62■□□□□ 0.25
LSM7-202ENST00000585395 ZFAND2AQ8N6M9 145 aa16.62■□□□□ 0.25
LSM7-202ENST00000585395 GNG13Q9P2W3 67 aa16.62■□□□□ 0.25
LSM7-202ENST00000585395 PSG8Q9UQ74 426 aa16.62■□□□□ 0.25
LSM7-202ENST00000585395 RBMY1A1P0DJD3 496 aaKnown RBP16.61■□□□□ 0.25
LSM7-202ENST00000585395 RBMY1CP0DJD4 496 aa16.61■□□□□ 0.25
LSM7-202ENST00000585395 RBMY1FQ15415 496 aaKnown RBP16.61■□□□□ 0.25
LSM7-202ENST00000585395 TREM1Q9NP99 234 aa16.61■□□□□ 0.25
LSM7-202ENST00000585395 HTN1P15515 57 aa16.6■□□□□ 0.25
LSM7-202ENST00000585395 UBE2G1P62253 170 aa16.6■□□□□ 0.25
LSM7-202ENST00000585395 BTN1A1Q13410 526 aa16.6■□□□□ 0.25
LSM7-202ENST00000585395 C16orf74Q96GX8 76 aa16.6■□□□□ 0.25
LSM7-202ENST00000585395 TRAV8-1A0A0A6YYK1 113 aa16.59■□□□□ 0.25
LSM7-202ENST00000585395 ZNF705GA8MUZ8 300 aaPredicted RBP16.59■□□□□ 0.25
LSM7-202ENST00000585395 C11orf94C9JXX5 98 aa16.59■□□□□ 0.25
LSM7-202ENST00000585395 S100A9P06702 114 aaKnown RBP16.59■□□□□ 0.25
LSM7-202ENST00000585395 KIR3DS1Q14943 382 aa16.59■□□□□ 0.25
LSM7-202ENST00000585395 FMC1Q96HJ9 113 aa16.59■□□□□ 0.25
LSM7-202ENST00000585395 RGS13O14921 159 aa16.58■□□□□ 0.24
LSM7-202ENST00000585395 SPART-AS1P0CW21 52 aa16.58■□□□□ 0.24
LSM7-202ENST00000585395 AKR1C3P42330 323 aa16.58■□□□□ 0.24
LSM7-202ENST00000585395 ATP5G3P48201 142 aa16.58■□□□□ 0.24
LSM7-202ENST00000585395 PRNTQ86SH4 94 aa16.58■□□□□ 0.24
LSM7-202ENST00000585395 TMEM263Q8WUH6 116 aaKnown RBP16.58■□□□□ 0.24
LSM7-202ENST00000585395 LINC00467Q9BRT7 94 aa16.58■□□□□ 0.24
LSM7-202ENST00000585395 EMP1P54849 157 aa16.57■□□□□ 0.24
LSM7-202ENST00000585395 ZNF680Q8NEM1 530 aa16.57■□□□□ 0.24
LSM7-202ENST00000585395 TRAV21A0A0B4J279 112 aa16.56■□□□□ 0.24
LSM7-202ENST00000585395 ZNF324O75467 553 aaPredicted RBP16.56■□□□□ 0.24
LSM7-202ENST00000585395 LY6G6CO95867 125 aa16.56■□□□□ 0.24
LSM7-202ENST00000585395 SMUG1Q53HV7 270 aa16.56■□□□□ 0.24
LSM7-202ENST00000585395 Q6AWC8 147 aa16.56■□□□□ 0.24
LSM7-202ENST00000585395 EIF4E3Q8N5X7 224 aaKnown RBP16.56■□□□□ 0.24
LSM7-202ENST00000585395 C2CD4CQ8TF44 421 aa16.56■□□□□ 0.24
LSM7-202ENST00000585395 SGK494Q96LW2 274 aa16.56■□□□□ 0.24
LSM7-202ENST00000585395 ZFP30Q9Y2G7 519 aa16.56■□□□□ 0.24
LSM7-202ENST00000585395 RYR1P21817 5038 aa16.55■□□□□ 0.24
LSM7-202ENST00000585395 CCL20P78556 96 aa16.55■□□□□ 0.24
LSM7-202ENST00000585395 IGHV1OR15-1A0A075B7D0 117 aa16.54■□□□□ 0.24
LSM7-202ENST00000585395 TRBV6-1A0A0K0K1D8 114 aa16.54■□□□□ 0.24
LSM7-202ENST00000585395 CBY3A6NI87 242 aa16.54■□□□□ 0.24
LSM7-202ENST00000585395 IGLV2-11P01706 119 aa16.54■□□□□ 0.24
LSM7-202ENST00000585395 PRR9Q5T870 116 aa16.54■□□□□ 0.24
LSM7-202ENST00000585395 FAM159AQ6UWV7 190 aa16.54■□□□□ 0.24
LSM7-202ENST00000585395 TRAV34A0A0B4J273 112 aa16.53■□□□□ 0.24
LSM7-202ENST00000585395 LYRM9A8MSI8 78 aa16.53■□□□□ 0.24
LSM7-202ENST00000585395 SNURFLB1AK76 121 aa16.53■□□□□ 0.24
LSM7-202ENST00000585395 PDE6DO43924 150 aa16.53■□□□□ 0.24
LSM7-202ENST00000585395 BCL2P10415 239 aa16.53■□□□□ 0.24
LSM7-202ENST00000585395 MEF2BQ02080 365 aaPredicted RBP16.53■□□□□ 0.24
LSM7-202ENST00000585395 TMEM183BQ1AE95 376 aa16.53■□□□□ 0.24
LSM7-202ENST00000585395 ANXA2RQ3ZCQ2 193 aa16.53■□□□□ 0.24
LSM7-202ENST00000585395 Q86TA4 180 aa16.53■□□□□ 0.24
LSM7-202ENST00000585395 VAX2Q9UIW0 290 aa16.53■□□□□ 0.24
LSM7-202ENST00000585395 CELA1Q9UNI1 258 aa16.53■□□□□ 0.24
LSM7-202ENST00000585395 KLF12Q9Y4X4 402 aa16.53■□□□□ 0.24
LSM7-202ENST00000585395 TIMM8BQ9Y5J9 83 aaPredicted RBP16.53■□□□□ 0.24
LSM7-202ENST00000585395 TRAV10A0A0B4J240 114 aa16.52■□□□□ 0.24
LSM7-202ENST00000585395 TEX261Q6UWH6 196 aa16.52■□□□□ 0.24
LSM7-202ENST00000585395 Q6ZTC4 211 aa16.52■□□□□ 0.24
LSM7-202ENST00000585395 LINC00479Q96M42 142 aa16.52■□□□□ 0.24
LSM7-202ENST00000585395 IGLL5B9A064 214 aa16.51■□□□□ 0.23
LSM7-202ENST00000585395 GCGP01275 180 aa16.51■□□□□ 0.23
LSM7-202ENST00000585395 AZU1P20160 251 aa16.51■□□□□ 0.23
LSM7-202ENST00000585395 FAM222AQ5U5X8 452 aa16.51■□□□□ 0.23
LSM7-202ENST00000585395 ZNF767PQ75MW2 155 aa16.51■□□□□ 0.23
LSM7-202ENST00000585395 RNASE8Q8TDE3 154 aaKnown RBP16.51■□□□□ 0.23
LSM7-202ENST00000585395 TVP23CQ96ET8 276 aa16.51■□□□□ 0.23
LSM7-202ENST00000585395 KCNS1Q96KK3 526 aa16.51■□□□□ 0.23
LSM7-202ENST00000585395 DKK2Q9UBU2 259 aa16.51■□□□□ 0.23
LSM7-202ENST00000585395 TRGV11A0A075B6L2 103 aa16.5■□□□□ 0.23
LSM7-202ENST00000585395 SCO2A0A1W2PP80 73 aa16.5■□□□□ 0.23
LSM7-202ENST00000585395 C11orf52Q96A22 123 aa16.5■□□□□ 0.23
LSM7-202ENST00000585395 PFN1P07737 140 aaKnown RBP16.49■□□□□ 0.23
LSM7-202ENST00000585395 IBA57Q5T440 356 aaKnown RBP16.49■□□□□ 0.23
LSM7-202ENST00000585395 LYPD6BQ8NI32 183 aa16.49■□□□□ 0.23
LSM7-202ENST00000585395 NAGKQ9UJ70 344 aa16.49■□□□□ 0.23
LSM7-202ENST00000585395 DAD1P61803 113 aa16.48■□□□□ 0.23
LSM7-202ENST00000585395 ZNF415Q09FC8 603 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms