RNA–Protein interactions for RNA: ENST00000584310.1

SCN4A-203, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

TSL 4

Gene SCN4A, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-203ENST00000584310 ZNF324O75467 553 aaPredicted RBP10.5□□□□□ -0.73
SCN4A-203ENST00000584310 STAG3L2P0CL84 134 aa10.5□□□□□ -0.73
SCN4A-203ENST00000584310 STAG3L3P0CL85 134 aa10.5□□□□□ -0.73
SCN4A-203ENST00000584310 GOLT1AQ6ZVE7 132 aa10.5□□□□□ -0.73
SCN4A-203ENST00000584310 ZFAND2AQ8N6M9 145 aa10.5□□□□□ -0.73
SCN4A-203ENST00000584310 C5orf17Q8NAS9 161 aa10.5□□□□□ -0.73
SCN4A-203ENST00000584310 GCHFRP30047 84 aa10.49□□□□□ -0.73
SCN4A-203ENST00000584310 TCL1AP56279 114 aa10.49□□□□□ -0.73
SCN4A-203ENST00000584310 SLAQ13239 276 aa10.49□□□□□ -0.73
SCN4A-203ENST00000584310 LGALS9BQ3B8N2 356 aa10.49□□□□□ -0.73
SCN4A-203ENST00000584310 LINC00336Q6ZUF6 198 aa10.49□□□□□ -0.73
SCN4A-203ENST00000584310 STOML3Q8TAV4 291 aa10.49□□□□□ -0.73
SCN4A-203ENST00000584310 TRAV21A0A0B4J279 112 aa10.48□□□□□ -0.73
SCN4A-203ENST00000584310 PPT1P50897 306 aa10.48□□□□□ -0.73
SCN4A-203ENST00000584310 EIF5AP63241 154 aaKnown RBP10.48□□□□□ -0.73
SCN4A-203ENST00000584310 RPL7L1Q6DKI1 246 aaKnown RBP10.48□□□□□ -0.73
SCN4A-203ENST00000584310 NKX6-2Q9C056 277 aaPredicted RBP10.48□□□□□ -0.73
SCN4A-203ENST00000584310 TREM1Q9NP99 234 aa10.48□□□□□ -0.73
SCN4A-203ENST00000584310 NAGKQ9UJ70 344 aa10.48□□□□□ -0.73
SCN4A-203ENST00000584310 TRAV26-1A0A087WT03 109 aa10.47□□□□□ -0.73
SCN4A-203ENST00000584310 CTXND1A0A1B0GTU2 59 aa10.47□□□□□ -0.73
SCN4A-203ENST00000584310 RNF222A6NCQ9 220 aa10.47□□□□□ -0.73
SCN4A-203ENST00000584310 H3BNG1 76 aa10.47□□□□□ -0.73
SCN4A-203ENST00000584310 Q5BKY6 102 aa10.47□□□□□ -0.73
SCN4A-203ENST00000584310 Q6ZTI0 123 aa10.47□□□□□ -0.73
SCN4A-203ENST00000584310 LINC00612Q8N6U2 182 aa10.47□□□□□ -0.73
SCN4A-203ENST00000584310 KCNS1Q96KK3 526 aa10.47□□□□□ -0.73
SCN4A-203ENST00000584310 SPXQ9BT56 116 aa10.47□□□□□ -0.73
SCN4A-203ENST00000584310 SH3BGRL3Q9H299 93 aa10.47□□□□□ -0.73
SCN4A-203ENST00000584310 SACSQ9NZJ4 4579 aa10.47□□□□□ -0.73
SCN4A-203ENST00000584310 M0R2N4 97 aa10.46□□□□□ -0.73
SCN4A-203ENST00000584310 EIF3GO75821 320 aaKnown RBP eCLIP10.46□□□□□ -0.73
SCN4A-203ENST00000584310 IFNA7P01567 189 aa10.46□□□□□ -0.73
SCN4A-203ENST00000584310 MUC21Q5SSG8 566 aa10.46□□□□□ -0.73
SCN4A-203ENST00000584310 Q6AWC8 147 aa10.46□□□□□ -0.73
SCN4A-203ENST00000584310 C18orf15Q96N68 181 aa10.46□□□□□ -0.73
SCN4A-203ENST00000584310 LYSTQ99698 3801 aa10.46□□□□□ -0.73
SCN4A-203ENST00000584310 SDF2L1Q9HCN8 221 aa10.46□□□□□ -0.73
SCN4A-203ENST00000584310 IGLV2-18A0A075B6J9 118 aa10.45□□□□□ -0.74
SCN4A-203ENST00000584310 A0A0J9YY99 117 aa10.45□□□□□ -0.74
SCN4A-203ENST00000584310 KANTRA0A1W2PQU2 76 aa10.45□□□□□ -0.74
SCN4A-203ENST00000584310 A0A1W2PRE2 83 aa10.45□□□□□ -0.74
SCN4A-203ENST00000584310 F6UZH7 168 aa10.45□□□□□ -0.74
SCN4A-203ENST00000584310 SPINK4O60575 86 aa10.45□□□□□ -0.74
SCN4A-203ENST00000584310 SUMO1P63165 101 aaKnown RBP10.45□□□□□ -0.74
SCN4A-203ENST00000584310 SAPCD1Q5SSQ6 148 aa10.45□□□□□ -0.74
SCN4A-203ENST00000584310 CYB561D1Q8N8Q1 229 aa10.45□□□□□ -0.74
SCN4A-203ENST00000584310 C11orf72Q8NBR9 251 aa10.45□□□□□ -0.74
SCN4A-203ENST00000584310 TMPRSS5Q9H3S3 457 aa10.45□□□□□ -0.74
SCN4A-203ENST00000584310 KLF12Q9Y4X4 402 aa10.45□□□□□ -0.74
SCN4A-203ENST00000584310 A0A0D9SG52 128 aa10.44□□□□□ -0.74
SCN4A-203ENST00000584310 TCRAP04437 139 aa10.44□□□□□ -0.74
SCN4A-203ENST00000584310 ZNF345Q14585 488 aa10.44□□□□□ -0.74
SCN4A-203ENST00000584310 TMEM183BQ1AE95 376 aa10.44□□□□□ -0.74
SCN4A-203ENST00000584310 SSX7Q7RTT5 188 aa10.44□□□□□ -0.74
SCN4A-203ENST00000584310 TMEM183AQ8IXX5 376 aa10.44□□□□□ -0.74
SCN4A-203ENST00000584310 ALMS1Q8TCU4 4167 aa10.44□□□□□ -0.74
SCN4A-203ENST00000584310 TRGV4A0A0C4DH28 118 aa10.43□□□□□ -0.74
SCN4A-203ENST00000584310 PFDN1O60925 122 aa10.43□□□□□ -0.74
SCN4A-203ENST00000584310 GNG5P63218 68 aa10.43□□□□□ -0.74
SCN4A-203ENST00000584310 SMUG1Q53HV7 270 aa10.43□□□□□ -0.74
SCN4A-203ENST00000584310 PRR9Q5T870 116 aa10.43□□□□□ -0.74
SCN4A-203ENST00000584310 PCNPQ8WW12 178 aaKnown RBP10.43□□□□□ -0.74
SCN4A-203ENST00000584310 EPDR1Q9UM22 224 aa10.43□□□□□ -0.74
SCN4A-203ENST00000584310 UMAD1C9J7I0 102 aa10.42□□□□□ -0.74
SCN4A-203ENST00000584310 PAX4O43316 350 aa10.42□□□□□ -0.74
SCN4A-203ENST00000584310 FLI1Q01543 452 aaPredicted RBP10.42□□□□□ -0.74
SCN4A-203ENST00000584310 TTC32Q5I0X7 151 aa10.42□□□□□ -0.74
SCN4A-203ENST00000584310 C1orf134Q5TEV5 83 aa10.42□□□□□ -0.74
SCN4A-203ENST00000584310 TMEM75Q8N9X5 138 aa10.42□□□□□ -0.74
SCN4A-203ENST00000584310 SUN5Q8TC36 379 aa10.42□□□□□ -0.74
SCN4A-203ENST00000584310 MRPL16Q9NX20 251 aaKnown RBP10.42□□□□□ -0.74
SCN4A-203ENST00000584310 PRO0255Q9UI72 69 aa10.42□□□□□ -0.74
SCN4A-203ENST00000584310 TP53TG3Q9ULZ0 132 aa10.42□□□□□ -0.74
SCN4A-203ENST00000584310 PSG8Q9UQ74 426 aa10.42□□□□□ -0.74
SCN4A-203ENST00000584310 ICOSQ9Y6W8 199 aa10.42□□□□□ -0.74
SCN4A-203ENST00000584310 PLECQ15149 4684 aaKnown RBP10.42□□□□□ -0.74
SCN4A-203ENST00000584310 TRAV8-1A0A0A6YYK1 113 aa10.41□□□□□ -0.74
SCN4A-203ENST00000584310 MAP1LC3B2A6NCE7 125 aa10.41□□□□□ -0.74
SCN4A-203ENST00000584310 HMSDA8MTL9 139 aa10.41□□□□□ -0.74
SCN4A-203ENST00000584310 TDRG1Q3Y452 100 aa10.41□□□□□ -0.74
SCN4A-203ENST00000584310 PRNTQ86SH4 94 aa10.41□□□□□ -0.74
SCN4A-203ENST00000584310 HIST1H2BAQ96A08 127 aa10.41□□□□□ -0.74
SCN4A-203ENST00000584310 TCEAL7Q9BRU2 100 aa10.41□□□□□ -0.74
SCN4A-203ENST00000584310 ZNF471Q9BX82 626 aaPredicted RBP10.41□□□□□ -0.74
SCN4A-203ENST00000584310 MAP1LC3BQ9GZQ8 125 aa10.41□□□□□ -0.74
SCN4A-203ENST00000584310 M0R2P5 195 aa10.4□□□□□ -0.74
SCN4A-203ENST00000584310 IGHV3-53P01767 116 aa10.4□□□□□ -0.74
SCN4A-203ENST00000584310 HOXA5P20719 270 aa10.4□□□□□ -0.74
SCN4A-203ENST00000584310 UBE2G2P60604 165 aa10.4□□□□□ -0.74
SCN4A-203ENST00000584310 EIF5AL1Q6IS14 154 aaKnown RBP10.4□□□□□ -0.74
SCN4A-203ENST00000584310 KCNRGQ8N5I3 272 aa10.4□□□□□ -0.74
SCN4A-203ENST00000584310 HHLA3Q9XRX5 114 aa10.4□□□□□ -0.74
SCN4A-203ENST00000584310 DNAH1Q9P2D7 4330 aa10.39□□□□□ -0.75
SCN4A-203ENST00000584310 GCGP01275 180 aa10.39□□□□□ -0.75
SCN4A-203ENST00000584310 PFN1P07737 140 aaKnown RBP10.39□□□□□ -0.75
SCN4A-203ENST00000584310 SEC11BP0C7V7 166 aa10.39□□□□□ -0.75
SCN4A-203ENST00000584310 UBE2G1P62253 170 aa10.39□□□□□ -0.75
SCN4A-203ENST00000584310 MRPL23Q16540 153 aaKnown RBP10.39□□□□□ -0.75
SCN4A-203ENST00000584310 OR4C5Q8NGB2 326 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms