RNA–Protein interactions for RNA: ENST00000582955.5

SMARCE1-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-218ENST00000582955 Q6ZNX1 250 aa8.94□□□□□ -0.98
SMARCE1-218ENST00000582955 EIF4E3Q8N5X7 224 aaKnown RBP8.94□□□□□ -0.98
SMARCE1-218ENST00000582955 ARL6IP6Q8N6S5 226 aa8.94□□□□□ -0.98
SMARCE1-218ENST00000582955 C5orf17Q8NAS9 161 aa8.94□□□□□ -0.98
SMARCE1-218ENST00000582955 SUN5Q8TC36 379 aa8.94□□□□□ -0.98
SMARCE1-218ENST00000582955 NDUFAF3Q9BU61 184 aa8.94□□□□□ -0.98
SMARCE1-218ENST00000582955 hCG_2014768A0A024R1R8 64 aa8.93□□□□□ -0.98
SMARCE1-218ENST00000582955 TRAV8-1A0A0A6YYK1 113 aa8.93□□□□□ -0.98
SMARCE1-218ENST00000582955 MAP1LC3B2A6NCE7 125 aa8.93□□□□□ -0.98
SMARCE1-218ENST00000582955 SUMO1P63165 101 aaKnown RBP8.93□□□□□ -0.98
SMARCE1-218ENST00000582955 Q6ZQT7 251 aa8.93□□□□□ -0.98
SMARCE1-218ENST00000582955 TMUB2Q71RG4 321 aa8.93□□□□□ -0.98
SMARCE1-218ENST00000582955 ZNF680Q8NEM1 530 aa8.93□□□□□ -0.98
SMARCE1-218ENST00000582955 TMED6Q8WW62 240 aa8.93□□□□□ -0.98
SMARCE1-218ENST00000582955 MAP1LC3BQ9GZQ8 125 aa8.93□□□□□ -0.98
SMARCE1-218ENST00000582955 TMPRSS5Q9H3S3 457 aa8.93□□□□□ -0.98
SMARCE1-218ENST00000582955 LENEPQ9Y5L5 61 aa8.93□□□□□ -0.98
SMARCE1-218ENST00000582955 HYDINQ4G0P3 5121 aa8.92□□□□□ -0.98
SMARCE1-218ENST00000582955 IGHV1OR15-1A0A075B7D0 117 aa8.92□□□□□ -0.98
SMARCE1-218ENST00000582955 SERTM2A0A1B0GWG4 89 aa8.92□□□□□ -0.98
SMARCE1-218ENST00000582955 GAGE12BA1L429 117 aa8.92□□□□□ -0.98
SMARCE1-218ENST00000582955 GGTLC3B5MD39 225 aa8.92□□□□□ -0.98
SMARCE1-218ENST00000582955 K7EQM0 130 aa8.92□□□□□ -0.98
SMARCE1-218ENST00000582955 GAGE7O76087 117 aa8.92□□□□□ -0.98
SMARCE1-218ENST00000582955 TCRAP04437 139 aa8.92□□□□□ -0.98
SMARCE1-218ENST00000582955 ATP5G1P05496 136 aa8.92□□□□□ -0.98
SMARCE1-218ENST00000582955 SEC11BP0C7V7 166 aa8.92□□□□□ -0.98
SMARCE1-218ENST00000582955 GAGE12FP0CL80 117 aa8.92□□□□□ -0.98
SMARCE1-218ENST00000582955 GAGE12GP0CL81 117 aa8.92□□□□□ -0.98
SMARCE1-218ENST00000582955 GAGE12IP0CL82 117 aa8.92□□□□□ -0.98
SMARCE1-218ENST00000582955 ATP5G3P48201 142 aa8.92□□□□□ -0.98
SMARCE1-218ENST00000582955 UBE2G2P60604 165 aa8.92□□□□□ -0.98
SMARCE1-218ENST00000582955 EIF5AP63241 154 aaKnown RBP8.92□□□□□ -0.98
SMARCE1-218ENST00000582955 TCTE3Q8IZS6 198 aa8.92□□□□□ -0.98
SMARCE1-218ENST00000582955 FAM210BQ96KR6 192 aa8.92□□□□□ -0.98
SMARCE1-218ENST00000582955 SGK494Q96LW2 274 aa8.92□□□□□ -0.98
SMARCE1-218ENST00000582955 LINC00467Q9BRT7 94 aa8.92□□□□□ -0.98
SMARCE1-218ENST00000582955 GSN-AS1Q9NRJ2 163 aa8.92□□□□□ -0.98
SMARCE1-218ENST00000582955 A0A1W2PRE2 83 aa8.91□□□□□ -0.98
SMARCE1-218ENST00000582955 F5H768 121 aa8.91□□□□□ -0.98
SMARCE1-218ENST00000582955 F6UZH7 168 aa8.91□□□□□ -0.98
SMARCE1-218ENST00000582955 IFNA7P01567 189 aa8.91□□□□□ -0.98
SMARCE1-218ENST00000582955 FHITP49789 147 aa8.91□□□□□ -0.98
SMARCE1-218ENST00000582955 ANXA2RQ3ZCQ2 193 aa8.91□□□□□ -0.98
SMARCE1-218ENST00000582955 MUC21Q5SSG8 566 aa8.91□□□□□ -0.98
SMARCE1-218ENST00000582955 TMEM88Q6PEY1 159 aa8.91□□□□□ -0.98
SMARCE1-218ENST00000582955 STOML3Q8TAV4 291 aa8.91□□□□□ -0.98
SMARCE1-218ENST00000582955 FAM213BQ8TBF2 198 aa8.91□□□□□ -0.98
SMARCE1-218ENST00000582955 NDFIP1Q9BT67 221 aa8.91□□□□□ -0.98
SMARCE1-218ENST00000582955 TREM1Q9NP99 234 aa8.91□□□□□ -0.98
SMARCE1-218ENST00000582955 EPDR1Q9UM22 224 aa8.91□□□□□ -0.98
SMARCE1-218ENST00000582955 UMAD1C9J7I0 102 aa8.9□□□□□ -0.98
SMARCE1-218ENST00000582955 TPT1P13693 172 aaKnown RBP8.9□□□□□ -0.98
SMARCE1-218ENST00000582955 DAZ2Q13117 558 aaKnown RBP8.9□□□□□ -0.98
SMARCE1-218ENST00000582955 Q6AWC8 147 aa8.9□□□□□ -0.98
SMARCE1-218ENST00000582955 CYB561D1Q8N8Q1 229 aa8.9□□□□□ -0.98
SMARCE1-218ENST00000582955 C11orf72Q8NBR9 251 aa8.9□□□□□ -0.98
SMARCE1-218ENST00000582955 ATG101Q9BSB4 218 aa8.9□□□□□ -0.98
SMARCE1-218ENST00000582955 NAGKQ9UJ70 344 aa8.9□□□□□ -0.98
SMARCE1-218ENST00000582955 TP53TG3Q9ULZ0 132 aa8.9□□□□□ -0.98
SMARCE1-218ENST00000582955 TCL1AP56279 114 aa8.89□□□□□ -0.99
SMARCE1-218ENST00000582955 ZNF415Q09FC8 603 aa8.89□□□□□ -0.99
SMARCE1-218ENST00000582955 IBA57Q5T440 356 aaKnown RBP8.89□□□□□ -0.99
SMARCE1-218ENST00000582955 FAM159AQ6UWV7 190 aa8.89□□□□□ -0.99
SMARCE1-218ENST00000582955 Q6ZTI0 123 aa8.89□□□□□ -0.99
SMARCE1-218ENST00000582955 PRNTQ86SH4 94 aa8.89□□□□□ -0.99
SMARCE1-218ENST00000582955 AKAP14Q86UN6 197 aa8.89□□□□□ -0.99
SMARCE1-218ENST00000582955 TVP23CQ96ET8 276 aa8.89□□□□□ -0.99
SMARCE1-218ENST00000582955 PSG8Q9UQ74 426 aa8.89□□□□□ -0.99
SMARCE1-218ENST00000582955 KLF12Q9Y4X4 402 aa8.89□□□□□ -0.99
SMARCE1-218ENST00000582955 TRGV2A0A075B6R0 118 aa8.88□□□□□ -0.99
SMARCE1-218ENST00000582955 TRGV1A0A0A0MS02 117 aa8.88□□□□□ -0.99
SMARCE1-218ENST00000582955 TRAV21A0A0B4J279 112 aa8.88□□□□□ -0.99
SMARCE1-218ENST00000582955 A0A1B0GV50 99 aa8.88□□□□□ -0.99
SMARCE1-218ENST00000582955 FAM74A7A6NL05 159 aa8.88□□□□□ -0.99
SMARCE1-218ENST00000582955 C1QBP02746 253 aa8.88□□□□□ -0.99
SMARCE1-218ENST00000582955 P0DMU3 169 aa8.88□□□□□ -0.99
SMARCE1-218ENST00000582955 FAM231AP0DMU4 169 aa8.88□□□□□ -0.99
SMARCE1-218ENST00000582955 FAM231CP0DMU5 169 aa8.88□□□□□ -0.99
SMARCE1-218ENST00000582955 FLI1Q01543 452 aaPredicted RBP8.88□□□□□ -0.99
SMARCE1-218ENST00000582955 LGALSLQ3ZCW2 172 aaPredicted RBP8.88□□□□□ -0.99
SMARCE1-218ENST00000582955 LINC00612Q8N6U2 182 aa8.88□□□□□ -0.99
SMARCE1-218ENST00000582955 TMEM75Q8N9X5 138 aa8.88□□□□□ -0.99
SMARCE1-218ENST00000582955 SFT2D1Q8WV19 159 aa8.88□□□□□ -0.99
SMARCE1-218ENST00000582955 TRGV11A0A075B6L2 103 aa8.87□□□□□ -0.99
SMARCE1-218ENST00000582955 FBLL1A6NHQ2 334 aaKnown RBP8.87□□□□□ -0.99
SMARCE1-218ENST00000582955 PEX7O00628 323 aa8.87□□□□□ -0.99
SMARCE1-218ENST00000582955 PPT1P50897 306 aa8.87□□□□□ -0.99
SMARCE1-218ENST00000582955 OR5I1Q13606 314 aa8.87□□□□□ -0.99
SMARCE1-218ENST00000582955 TMEM183BQ1AE95 376 aa8.87□□□□□ -0.99
SMARCE1-218ENST00000582955 ZFP69Q49AA0 526 aa8.87□□□□□ -0.99
SMARCE1-218ENST00000582955 CST9LP1Q5W188 147 aa8.87□□□□□ -0.99
SMARCE1-218ENST00000582955 DPPA3Q6W0C5 159 aa8.87□□□□□ -0.99
SMARCE1-218ENST00000582955 UBE2DNLQ8IWF7 75 aa8.87□□□□□ -0.99
SMARCE1-218ENST00000582955 TMEM183AQ8IXX5 376 aa8.87□□□□□ -0.99
SMARCE1-218ENST00000582955 C15orf53Q8NAA6 179 aa8.87□□□□□ -0.99
SMARCE1-218ENST00000582955 C8orf49Q96NF6 230 aa8.87□□□□□ -0.99
SMARCE1-218ENST00000582955 NKX6-2Q9C056 277 aaPredicted RBP8.87□□□□□ -0.99
SMARCE1-218ENST00000582955 TRAV34A0A0B4J273 112 aa8.86□□□□□ -0.99
SMARCE1-218ENST00000582955 SPINK4O60575 86 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms