RNA–Protein interactions for RNA: ENST00000580315.1

CDC42EP4-205, Transcript of CDC42 effector protein 4, humanhuman

TSL 2

Gene CDC42EP4, Length 1,022 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-205ENST00000580315 ST6GAL2Q96JF0 529 aa17.53■□□□□ 0.4
CDC42EP4-205ENST00000580315 FAT2Q9NYQ8 4349 aa17.53■□□□□ 0.4
CDC42EP4-205ENST00000580315 DAZ2Q13117 558 aaKnown RBP17.52■□□□□ 0.4
CDC42EP4-205ENST00000580315 AKR1C8PQ5T2L2 129 aa17.52■□□□□ 0.4
CDC42EP4-205ENST00000580315 GOLT1AQ6ZVE7 132 aa17.52■□□□□ 0.4
CDC42EP4-205ENST00000580315 C15orf53Q8NAA6 179 aa17.52■□□□□ 0.4
CDC42EP4-205ENST00000580315 SUN5Q8TC36 379 aa17.52■□□□□ 0.4
CDC42EP4-205ENST00000580315 IGHV1OR15-1A0A075B7D0 117 aa17.51■□□□□ 0.39
CDC42EP4-205ENST00000580315 IQCF2Q8IXL9 164 aa17.51■□□□□ 0.39
CDC42EP4-205ENST00000580315 DNAH2Q9P225 4427 aa17.51■□□□□ 0.39
CDC42EP4-205ENST00000580315 CTXND1A0A1B0GTU2 59 aa17.5■□□□□ 0.39
CDC42EP4-205ENST00000580315 SERTM2A0A1B0GWG4 89 aa17.5■□□□□ 0.39
CDC42EP4-205ENST00000580315 ZNF345Q14585 488 aa17.5■□□□□ 0.39
CDC42EP4-205ENST00000580315 LINC00612Q8N6U2 182 aa17.5■□□□□ 0.39
CDC42EP4-205ENST00000580315 POM121L12Q8N7R1 296 aa17.5■□□□□ 0.39
CDC42EP4-205ENST00000580315 C5orf17Q8NAS9 161 aa17.5■□□□□ 0.39
CDC42EP4-205ENST00000580315 ARPC5LQ9BPX5 153 aa17.5■□□□□ 0.39
CDC42EP4-205ENST00000580315 GSN-AS1Q9NRJ2 163 aa17.5■□□□□ 0.39
CDC42EP4-205ENST00000580315 CYTL1Q9NRR1 136 aa17.5■□□□□ 0.39
CDC42EP4-205ENST00000580315 PKHD1P08F94 4074 aa17.5■□□□□ 0.39
CDC42EP4-205ENST00000580315 A0A1B0GVY2 172 aa17.49■□□□□ 0.39
CDC42EP4-205ENST00000580315 GAGE12BA1L429 117 aa17.49■□□□□ 0.39
CDC42EP4-205ENST00000580315 HMSDA8MTL9 139 aa17.49■□□□□ 0.39
CDC42EP4-205ENST00000580315 GAGE7O76087 117 aa17.49■□□□□ 0.39
CDC42EP4-205ENST00000580315 GAGE12FP0CL80 117 aa17.49■□□□□ 0.39
CDC42EP4-205ENST00000580315 GAGE12GP0CL81 117 aa17.49■□□□□ 0.39
CDC42EP4-205ENST00000580315 GAGE12IP0CL82 117 aa17.49■□□□□ 0.39
CDC42EP4-205ENST00000580315 UBE2DNLQ8IWF7 75 aa17.49■□□□□ 0.39
CDC42EP4-205ENST00000580315 KCNRGQ8N5I3 272 aa17.49■□□□□ 0.39
CDC42EP4-205ENST00000580315 K7EQM0 130 aa17.48■□□□□ 0.39
CDC42EP4-205ENST00000580315 GNG5P63218 68 aa17.48■□□□□ 0.39
CDC42EP4-205ENST00000580315 IBA57Q5T440 356 aaKnown RBP17.48■□□□□ 0.39
CDC42EP4-205ENST00000580315 SSX7Q7RTT5 188 aa17.48■□□□□ 0.39
CDC42EP4-205ENST00000580315 C11orf72Q8NBR9 251 aa17.48■□□□□ 0.39
CDC42EP4-205ENST00000580315 Q6AWC8 147 aa17.47■□□□□ 0.39
CDC42EP4-205ENST00000580315 DNAH17Q9UFH2 4485 aa17.47■□□□□ 0.39
CDC42EP4-205ENST00000580315 A0A0D9SG52 128 aa17.46■□□□□ 0.39
CDC42EP4-205ENST00000580315 TCL1AP56279 114 aa17.46■□□□□ 0.39
CDC42EP4-205ENST00000580315 SUMO1P63165 101 aaKnown RBP17.46■□□□□ 0.39
CDC42EP4-205ENST00000580315 ZNF726P1Q15940 193 aa17.46■□□□□ 0.39
CDC42EP4-205ENST00000580315 NDFIP1Q9BT67 221 aa17.46■□□□□ 0.39
CDC42EP4-205ENST00000580315 TRAV8-1A0A0A6YYK1 113 aa17.45■□□□□ 0.38
CDC42EP4-205ENST00000580315 TCRAP04437 139 aa17.45■□□□□ 0.38
CDC42EP4-205ENST00000580315 FAM159AQ6UWV7 190 aa17.45■□□□□ 0.38
CDC42EP4-205ENST00000580315 Q6ZQT7 251 aa17.45■□□□□ 0.38
CDC42EP4-205ENST00000580315 Q6ZTI0 123 aa17.45■□□□□ 0.38
CDC42EP4-205ENST00000580315 TREM1Q9NP99 234 aa17.45■□□□□ 0.38
CDC42EP4-205ENST00000580315 TP53TG3Q9ULZ0 132 aa17.45■□□□□ 0.38
CDC42EP4-205ENST00000580315 TRGV2A0A075B6R0 118 aa17.44■□□□□ 0.38
CDC42EP4-205ENST00000580315 TRGV1A0A0A0MS02 117 aa17.44■□□□□ 0.38
CDC42EP4-205ENST00000580315 A0A1W2PRE2 83 aa17.44■□□□□ 0.38
CDC42EP4-205ENST00000580315 ZNF415Q09FC8 603 aa17.44■□□□□ 0.38
CDC42EP4-205ENST00000580315 OR5I1Q13606 314 aa17.44■□□□□ 0.38
CDC42EP4-205ENST00000580315 RNF212Q495C1 297 aa17.44■□□□□ 0.38
CDC42EP4-205ENST00000580315 MUC21Q5SSG8 566 aa17.44■□□□□ 0.38
CDC42EP4-205ENST00000580315 OR11H4Q8NGC9 324 aa17.44■□□□□ 0.38
CDC42EP4-205ENST00000580315 KLF12Q9Y4X4 402 aa17.44■□□□□ 0.38
CDC42EP4-205ENST00000580315 KANTRA0A1W2PQU2 76 aa17.43■□□□□ 0.38
CDC42EP4-205ENST00000580315 GGTLC3B5MD39 225 aa17.43■□□□□ 0.38
CDC42EP4-205ENST00000580315 MED14OSP0DP75 135 aa17.43■□□□□ 0.38
CDC42EP4-205ENST00000580315 EPDR1Q9UM22 224 aa17.43■□□□□ 0.38
CDC42EP4-205ENST00000580315 SPINK4O60575 86 aa17.42■□□□□ 0.38
CDC42EP4-205ENST00000580315 NUDT3O95989 172 aa17.42■□□□□ 0.38
CDC42EP4-205ENST00000580315 TRGV11A0A075B6L2 103 aa17.41■□□□□ 0.38
CDC42EP4-205ENST00000580315 TRAV21A0A0B4J279 112 aa17.41■□□□□ 0.38
CDC42EP4-205ENST00000580315 MAP1LC3B2A6NCE7 125 aa17.41■□□□□ 0.38
CDC42EP4-205ENST00000580315 FBLL1A6NHQ2 334 aaKnown RBP17.41■□□□□ 0.38
CDC42EP4-205ENST00000580315 PRSS29PA6NIE9 313 aa17.41■□□□□ 0.38
CDC42EP4-205ENST00000580315 RTL8CO15255 209 aa17.41■□□□□ 0.38
CDC42EP4-205ENST00000580315 BCL2L11O43521 198 aa17.41■□□□□ 0.38
CDC42EP4-205ENST00000580315 CYB561D1Q8N8Q1 229 aa17.41■□□□□ 0.38
CDC42EP4-205ENST00000580315 SGK494Q96LW2 274 aa17.41■□□□□ 0.38
CDC42EP4-205ENST00000580315 C18orf15Q96N68 181 aa17.41■□□□□ 0.38
CDC42EP4-205ENST00000580315 ATG101Q9BSB4 218 aa17.41■□□□□ 0.38
CDC42EP4-205ENST00000580315 ZNF471Q9BX82 626 aaPredicted RBP17.41■□□□□ 0.38
CDC42EP4-205ENST00000580315 MAP1LC3BQ9GZQ8 125 aa17.41■□□□□ 0.38
CDC42EP4-205ENST00000580315 TMPRSS5Q9H3S3 457 aa17.41■□□□□ 0.38
CDC42EP4-205ENST00000580315 NAGKQ9UJ70 344 aa17.41■□□□□ 0.38
CDC42EP4-205ENST00000580315 F6UZH7 168 aa17.4■□□□□ 0.38
CDC42EP4-205ENST00000580315 SEC11BP0C7V7 166 aa17.4■□□□□ 0.38
CDC42EP4-205ENST00000580315 FGF8P55075 233 aaPredicted RBP17.4■□□□□ 0.38
CDC42EP4-205ENST00000580315 EIF5AP63241 154 aaKnown RBP17.4■□□□□ 0.38
CDC42EP4-205ENST00000580315 LGALS9BQ3B8N2 356 aa17.4■□□□□ 0.38
CDC42EP4-205ENST00000580315 STOML3Q8TAV4 291 aa17.4■□□□□ 0.38
CDC42EP4-205ENST00000580315 NKX6-2Q9C056 277 aaPredicted RBP17.4■□□□□ 0.38
CDC42EP4-205ENST00000580315 M0R2N4 97 aa17.39■□□□□ 0.37
CDC42EP4-205ENST00000580315 PFDN1O60925 122 aa17.39■□□□□ 0.37
CDC42EP4-205ENST00000580315 IFNA7P01567 189 aa17.39■□□□□ 0.37
CDC42EP4-205ENST00000580315 UBE2G2P60604 165 aa17.39■□□□□ 0.37
CDC42EP4-205ENST00000580315 TVP23CQ96ET8 276 aa17.39■□□□□ 0.37
CDC42EP4-205ENST00000580315 PSG8Q9UQ74 426 aa17.39■□□□□ 0.37
CDC42EP4-205ENST00000580315 TRAV26-1A0A087WT03 109 aa17.38■□□□□ 0.37
CDC42EP4-205ENST00000580315 UMAD1C9J7I0 102 aa17.38■□□□□ 0.37
CDC42EP4-205ENST00000580315 HOXA5P20719 270 aa17.38■□□□□ 0.37
CDC42EP4-205ENST00000580315 FLI1Q01543 452 aaPredicted RBP17.38■□□□□ 0.37
CDC42EP4-205ENST00000580315 TMEM183BQ1AE95 376 aa17.38■□□□□ 0.37
CDC42EP4-205ENST00000580315 TDRG1Q3Y452 100 aa17.38■□□□□ 0.37
CDC42EP4-205ENST00000580315 TMEM183AQ8IXX5 376 aa17.38■□□□□ 0.37
CDC42EP4-205ENST00000580315 TMEM75Q8N9X5 138 aa17.38■□□□□ 0.37
CDC42EP4-205ENST00000580315 FAM3BP58499 235 aaPredicted RBP17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms