RNA–Protein interactions for RNA: ENST00000578187.1

CCDC57-211, Transcript of coiled-coil domain containing 57, humanhuman

TSL 2

Gene CCDC57, Length 696 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-211ENST00000578187 GGTLC3B5MD39 225 aa9.08□□□□□ -0.96
CCDC57-211ENST00000578187 ZNF324O75467 553 aaPredicted RBP9.08□□□□□ -0.96
CCDC57-211ENST00000578187 EIF5AP63241 154 aaKnown RBP9.08□□□□□ -0.96
CCDC57-211ENST00000578187 CD300CQ08708 224 aa9.08□□□□□ -0.96
CCDC57-211ENST00000578187 ZNF493Q6ZR52 646 aa9.08□□□□□ -0.96
CCDC57-211ENST00000578187 LINC00336Q6ZUF6 198 aa9.08□□□□□ -0.96
CCDC57-211ENST00000578187 AKAP14Q86UN6 197 aa9.08□□□□□ -0.96
CCDC57-211ENST00000578187 C5orf17Q8NAS9 161 aa9.08□□□□□ -0.96
CCDC57-211ENST00000578187 FAM210BQ96KR6 192 aa9.08□□□□□ -0.96
CCDC57-211ENST00000578187 PYGO2Q9BRQ0 406 aa9.08□□□□□ -0.96
CCDC57-211ENST00000578187 NIPSNAP3BQ9BS92 247 aa9.08□□□□□ -0.96
CCDC57-211ENST00000578187 MAP1LC3BQ9GZQ8 125 aa9.08□□□□□ -0.96
CCDC57-211ENST00000578187 LENEPQ9Y5L5 61 aa9.08□□□□□ -0.96
CCDC57-211ENST00000578187 FRAS1Q86XX4 4008 aa9.07□□□□□ -0.96
CCDC57-211ENST00000578187 SERTM2A0A1B0GWG4 89 aa9.07□□□□□ -0.96
CCDC57-211ENST00000578187 A0A1W2PRE2 83 aa9.07□□□□□ -0.96
CCDC57-211ENST00000578187 LYRM9A8MSI8 78 aa9.07□□□□□ -0.96
CCDC57-211ENST00000578187 UMAD1C9J7I0 102 aa9.07□□□□□ -0.96
CCDC57-211ENST00000578187 GPX1P07203 203 aa9.07□□□□□ -0.96
CCDC57-211ENST00000578187 TPT1P13693 172 aaKnown RBP9.07□□□□□ -0.96
CCDC57-211ENST00000578187 GNG5P63218 68 aa9.07□□□□□ -0.96
CCDC57-211ENST00000578187 LGALSLQ3ZCW2 172 aaPredicted RBP9.07□□□□□ -0.96
CCDC57-211ENST00000578187 GOLT1AQ6ZVE7 132 aa9.07□□□□□ -0.96
CCDC57-211ENST00000578187 UBE2DNLQ8IWF7 75 aa9.07□□□□□ -0.96
CCDC57-211ENST00000578187 IQCF2Q8IXL9 164 aa9.07□□□□□ -0.96
CCDC57-211ENST00000578187 POM121L12Q8N7R1 296 aa9.07□□□□□ -0.96
CCDC57-211ENST00000578187 LINC00467Q9BRT7 94 aa9.07□□□□□ -0.96
CCDC57-211ENST00000578187 RPH3ALQ9UNE2 315 aa9.07□□□□□ -0.96
CCDC57-211ENST00000578187 TCRAP04437 139 aa9.06□□□□□ -0.96
CCDC57-211ENST00000578187 HTN1P15515 57 aa9.06□□□□□ -0.96
CCDC57-211ENST00000578187 FHITP49789 147 aa9.06□□□□□ -0.96
CCDC57-211ENST00000578187 FGF8P55075 233 aaPredicted RBP9.06□□□□□ -0.96
CCDC57-211ENST00000578187 DPPA3Q6W0C5 159 aa9.06□□□□□ -0.96
CCDC57-211ENST00000578187 TMPRSS5Q9H3S3 457 aa9.06□□□□□ -0.96
CCDC57-211ENST00000578187 RNASE4P34096 147 aaKnown RBP9.05□□□□□ -0.96
CCDC57-211ENST00000578187 CCDC28AQ8IWP9 274 aa9.05□□□□□ -0.96
CCDC57-211ENST00000578187 TIMM8BQ9Y5J9 83 aaPredicted RBP9.05□□□□□ -0.96
CCDC57-211ENST00000578187 VPS13DQ5THJ4 4388 aa9.05□□□□□ -0.96
CCDC57-211ENST00000578187 TRAV8-1A0A0A6YYK1 113 aa9.04□□□□□ -0.96
CCDC57-211ENST00000578187 A0A1B0GVG6 124 aa9.04□□□□□ -0.96
CCDC57-211ENST00000578187 FAM74A7A6NL05 159 aa9.04□□□□□ -0.96
CCDC57-211ENST00000578187 DAD1P61803 113 aa9.04□□□□□ -0.96
CCDC57-211ENST00000578187 SUMO1P63165 101 aaKnown RBP9.04□□□□□ -0.96
CCDC57-211ENST00000578187 ANXA2RQ3ZCQ2 193 aa9.04□□□□□ -0.96
CCDC57-211ENST00000578187 Q6AWC8 147 aa9.04□□□□□ -0.96
CCDC57-211ENST00000578187 EIF4E3Q8N5X7 224 aaKnown RBP9.04□□□□□ -0.96
CCDC57-211ENST00000578187 CYB561D1Q8N8Q1 229 aa9.04□□□□□ -0.96
CCDC57-211ENST00000578187 C11orf72Q8NBR9 251 aa9.04□□□□□ -0.96
CCDC57-211ENST00000578187 ZNF680Q8NEM1 530 aa9.04□□□□□ -0.96
CCDC57-211ENST00000578187 FAM213BQ8TBF2 198 aa9.04□□□□□ -0.96
CCDC57-211ENST00000578187 MBD3L1Q8WWY6 194 aa9.04□□□□□ -0.96
CCDC57-211ENST00000578187 TVP23CQ96ET8 276 aa9.04□□□□□ -0.96
CCDC57-211ENST00000578187 ATG101Q9BSB4 218 aa9.04□□□□□ -0.96
CCDC57-211ENST00000578187 EPDR1Q9UM22 224 aa9.04□□□□□ -0.96
CCDC57-211ENST00000578187 K7EQM0 130 aa9.03□□□□□ -0.96
CCDC57-211ENST00000578187 EREGO14944 169 aa9.03□□□□□ -0.96
CCDC57-211ENST00000578187 HTN3P15516 51 aa9.03□□□□□ -0.96
CCDC57-211ENST00000578187 UBE2G2P60604 165 aa9.03□□□□□ -0.96
CCDC57-211ENST00000578187 Q6ZQT7 251 aa9.03□□□□□ -0.96
CCDC57-211ENST00000578187 C9orf62Q8N4C0 152 aa9.03□□□□□ -0.96
CCDC57-211ENST00000578187 LINC00612Q8N6U2 182 aa9.03□□□□□ -0.96
CCDC57-211ENST00000578187 TMEM75Q8N9X5 138 aa9.03□□□□□ -0.96
CCDC57-211ENST00000578187 NKX6-2Q9C056 277 aaPredicted RBP9.03□□□□□ -0.96
CCDC57-211ENST00000578187 ARL2-SNX15V9GYD0 113 aa9.03□□□□□ -0.96
CCDC57-211ENST00000578187 IGHV1OR15-1A0A075B7D0 117 aa9.02□□□□□ -0.97
CCDC57-211ENST00000578187 FBLL1A6NHQ2 334 aaKnown RBP9.02□□□□□ -0.97
CCDC57-211ENST00000578187 CBY3A6NI87 242 aa9.02□□□□□ -0.97
CCDC57-211ENST00000578187 SNURFLB1AK76 121 aa9.02□□□□□ -0.97
CCDC57-211ENST00000578187 IGLV2-11P01706 119 aa9.02□□□□□ -0.97
CCDC57-211ENST00000578187 EIF5AL1Q6IS14 154 aaKnown RBP9.02□□□□□ -0.97
CCDC57-211ENST00000578187 SLC51BQ86UW2 128 aa9.02□□□□□ -0.97
CCDC57-211ENST00000578187 NOP10Q9NPE3 64 aaKnown RBP9.02□□□□□ -0.97
CCDC57-211ENST00000578187 F6UZH7 168 aa9.01□□□□□ -0.97
CCDC57-211ENST00000578187 RGS13O14921 159 aa9.01□□□□□ -0.97
CCDC57-211ENST00000578187 DEFB130BP0DP73 79 aa9.01□□□□□ -0.97
CCDC57-211ENST00000578187 DEFB130AP0DP74 79 aa9.01□□□□□ -0.97
CCDC57-211ENST00000578187 LORP23490 312 aaPredicted RBP9.01□□□□□ -0.97
CCDC57-211ENST00000578187 RAB5CP51148 216 aa9.01□□□□□ -0.97
CCDC57-211ENST00000578187 TCL1AP56279 114 aa9.01□□□□□ -0.97
CCDC57-211ENST00000578187 FLI1Q01543 452 aaPredicted RBP9.01□□□□□ -0.97
CCDC57-211ENST00000578187 DAZ2Q13117 558 aaKnown RBP9.01□□□□□ -0.97
CCDC57-211ENST00000578187 ZFP69Q49AA0 526 aa9.01□□□□□ -0.97
CCDC57-211ENST00000578187 SOHLH1Q5JUK2 328 aa9.01□□□□□ -0.97
CCDC57-211ENST00000578187 IBA57Q5T440 356 aaKnown RBP9.01□□□□□ -0.97
CCDC57-211ENST00000578187 SFT2D1Q8WV19 159 aa9.01□□□□□ -0.97
CCDC57-211ENST00000578187 SGK494Q96LW2 274 aa9.01□□□□□ -0.97
CCDC57-211ENST00000578187 TCEAL7Q9BRU2 100 aa9.01□□□□□ -0.97
CCDC57-211ENST00000578187 NDFIP1Q9BT67 221 aa9.01□□□□□ -0.97
CCDC57-211ENST00000578187 TREM1Q9NP99 234 aa9.01□□□□□ -0.97
CCDC57-211ENST00000578187 PSG8Q9UQ74 426 aa9.01□□□□□ -0.97
CCDC57-211ENST00000578187 DNAH6Q9C0G6 4158 aa9.01□□□□□ -0.97
CCDC57-211ENST00000578187 M0R2N4 97 aa9□□□□□ -0.97
CCDC57-211ENST00000578187 PEX7O00628 323 aa9□□□□□ -0.97
CCDC57-211ENST00000578187 IFNA7P01567 189 aa9□□□□□ -0.97
CCDC57-211ENST00000578187 H2AFB1P0C5Y9 115 aa9□□□□□ -0.97
CCDC57-211ENST00000578187 LGALS9BQ3B8N2 356 aa9□□□□□ -0.97
CCDC57-211ENST00000578187 TDRG1Q3Y452 100 aa9□□□□□ -0.97
CCDC57-211ENST00000578187 RNF212Q495C1 297 aa9□□□□□ -0.97
CCDC57-211ENST00000578187 C15orf53Q8NAA6 179 aa9□□□□□ -0.97
CCDC57-211ENST00000578187 HIST1H2BAQ96A08 127 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms