RNA–Protein interactions for RNA: ENST00000577854.1

CDKN2A-211, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 3

Gene CDKN2A, Length 442 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-211ENST00000577854 TMUB2Q71RG4 321 aa6.56□□□□□ -1.36
CDKN2A-211ENST00000577854 EIF4E3Q8N5X7 224 aaKnown RBP6.56□□□□□ -1.36
CDKN2A-211ENST00000577854 ZFAND2AQ8N6M9 145 aa6.56□□□□□ -1.36
CDKN2A-211ENST00000577854 ZNF680Q8NEM1 530 aa6.56□□□□□ -1.36
CDKN2A-211ENST00000577854 SGK494Q96LW2 274 aa6.56□□□□□ -1.36
CDKN2A-211ENST00000577854 GSN-AS1Q9NRJ2 163 aa6.56□□□□□ -1.36
CDKN2A-211ENST00000577854 IGHV1OR15-1A0A075B7D0 117 aa6.55□□□□□ -1.36
CDKN2A-211ENST00000577854 TRGV1A0A0A0MS02 117 aa6.55□□□□□ -1.36
CDKN2A-211ENST00000577854 TRAV8-1A0A0A6YYK1 113 aa6.55□□□□□ -1.36
CDKN2A-211ENST00000577854 CTXND1A0A1B0GTU2 59 aa6.55□□□□□ -1.36
CDKN2A-211ENST00000577854 A0A1B0GV50 99 aa6.55□□□□□ -1.36
CDKN2A-211ENST00000577854 PLAC8L1A1L4L8 177 aa6.55□□□□□ -1.36
CDKN2A-211ENST00000577854 MAP1LC3B2A6NCE7 125 aa6.55□□□□□ -1.36
CDKN2A-211ENST00000577854 BCL2L11O43521 198 aa6.55□□□□□ -1.36
CDKN2A-211ENST00000577854 NMBP08949 121 aa6.55□□□□□ -1.36
CDKN2A-211ENST00000577854 P0DMU3 169 aa6.55□□□□□ -1.36
CDKN2A-211ENST00000577854 FAM231AP0DMU4 169 aa6.55□□□□□ -1.36
CDKN2A-211ENST00000577854 FAM231CP0DMU5 169 aa6.55□□□□□ -1.36
CDKN2A-211ENST00000577854 CRISP2P16562 243 aa6.55□□□□□ -1.36
CDKN2A-211ENST00000577854 SUMO1P63165 101 aaKnown RBP6.55□□□□□ -1.36
CDKN2A-211ENST00000577854 EIF5AL1Q6IS14 154 aaKnown RBP6.55□□□□□ -1.36
CDKN2A-211ENST00000577854 FAM159AQ6UWV7 190 aa6.55□□□□□ -1.36
CDKN2A-211ENST00000577854 SSX7Q7RTT5 188 aa6.55□□□□□ -1.36
CDKN2A-211ENST00000577854 C5orf17Q8NAS9 161 aa6.55□□□□□ -1.36
CDKN2A-211ENST00000577854 STOML3Q8TAV4 291 aa6.55□□□□□ -1.36
CDKN2A-211ENST00000577854 ATG101Q9BSB4 218 aa6.55□□□□□ -1.36
CDKN2A-211ENST00000577854 MAP1LC3BQ9GZQ8 125 aa6.55□□□□□ -1.36
CDKN2A-211ENST00000577854 TREM1Q9NP99 234 aa6.55□□□□□ -1.36
CDKN2A-211ENST00000577854 PLECQ15149 4684 aaKnown RBP6.55□□□□□ -1.36
CDKN2A-211ENST00000577854 ZNF324O75467 553 aaPredicted RBP6.54□□□□□ -1.36
CDKN2A-211ENST00000577854 TPT1P13693 172 aaKnown RBP6.54□□□□□ -1.36
CDKN2A-211ENST00000577854 ZNF415Q09FC8 603 aa6.54□□□□□ -1.36
CDKN2A-211ENST00000577854 TMEM183BQ1AE95 376 aa6.54□□□□□ -1.36
CDKN2A-211ENST00000577854 LGALSLQ3ZCW2 172 aaPredicted RBP6.54□□□□□ -1.36
CDKN2A-211ENST00000577854 Q6ZQT7 251 aa6.54□□□□□ -1.36
CDKN2A-211ENST00000577854 Q6ZTI0 123 aa6.54□□□□□ -1.36
CDKN2A-211ENST00000577854 PRNTQ86SH4 94 aa6.54□□□□□ -1.36
CDKN2A-211ENST00000577854 TMEM183AQ8IXX5 376 aa6.54□□□□□ -1.36
CDKN2A-211ENST00000577854 C9orf62Q8N4C0 152 aa6.54□□□□□ -1.36
CDKN2A-211ENST00000577854 FAM213BQ8TBF2 198 aa6.54□□□□□ -1.36
CDKN2A-211ENST00000577854 FAM210BQ96KR6 192 aa6.54□□□□□ -1.36
CDKN2A-211ENST00000577854 FAM19A4Q96LR4 140 aa6.54□□□□□ -1.36
CDKN2A-211ENST00000577854 TMPRSS5Q9H3S3 457 aa6.54□□□□□ -1.36
CDKN2A-211ENST00000577854 CYTL1Q9NRR1 136 aa6.54□□□□□ -1.36
CDKN2A-211ENST00000577854 TP53TG3Q9ULZ0 132 aa6.54□□□□□ -1.36
CDKN2A-211ENST00000577854 SACSQ9NZJ4 4579 aa6.53□□□□□ -1.36
CDKN2A-211ENST00000577854 TRBV7-9A0A0J9YWB2 115 aa6.53□□□□□ -1.36
CDKN2A-211ENST00000577854 A0A0J9YY99 117 aa6.53□□□□□ -1.36
CDKN2A-211ENST00000577854 SERTM2A0A1B0GWG4 89 aa6.53□□□□□ -1.36
CDKN2A-211ENST00000577854 GGTLC3B5MD39 225 aa6.53□□□□□ -1.36
CDKN2A-211ENST00000577854 IGHV3-53P01767 116 aa6.53□□□□□ -1.36
CDKN2A-211ENST00000577854 TCRAP04437 139 aa6.53□□□□□ -1.36
CDKN2A-211ENST00000577854 ZNF726P1Q15940 193 aa6.53□□□□□ -1.36
CDKN2A-211ENST00000577854 ANXA2RQ3ZCQ2 193 aa6.53□□□□□ -1.36
CDKN2A-211ENST00000577854 CST9LP1Q5W188 147 aa6.53□□□□□ -1.36
CDKN2A-211ENST00000577854 SLC51BQ86UW2 128 aa6.53□□□□□ -1.36
CDKN2A-211ENST00000577854 CYB561D1Q8N8Q1 229 aa6.53□□□□□ -1.36
CDKN2A-211ENST00000577854 C15orf53Q8NAA6 179 aa6.53□□□□□ -1.36
CDKN2A-211ENST00000577854 MRPL16Q9NX20 251 aaKnown RBP6.53□□□□□ -1.36
CDKN2A-211ENST00000577854 KLF12Q9Y4X4 402 aa6.53□□□□□ -1.36
CDKN2A-211ENST00000577854 LENEPQ9Y5L5 61 aa6.53□□□□□ -1.36
CDKN2A-211ENST00000577854 TRGV11A0A075B6L2 103 aa6.52□□□□□ -1.37
CDKN2A-211ENST00000577854 TRAV26-1A0A087WT03 109 aa6.52□□□□□ -1.37
CDKN2A-211ENST00000577854 TRAV21A0A0B4J279 112 aa6.52□□□□□ -1.37
CDKN2A-211ENST00000577854 FHITP49789 147 aa6.52□□□□□ -1.37
CDKN2A-211ENST00000577854 PPT1P50897 306 aa6.52□□□□□ -1.37
CDKN2A-211ENST00000577854 NKX2-5P52952 324 aaPredicted RBP6.52□□□□□ -1.37
CDKN2A-211ENST00000577854 TCL1AP56279 114 aa6.52□□□□□ -1.37
CDKN2A-211ENST00000577854 FLI1Q01543 452 aaPredicted RBP6.52□□□□□ -1.37
CDKN2A-211ENST00000577854 DAZ2Q13117 558 aaKnown RBP6.52□□□□□ -1.37
CDKN2A-211ENST00000577854 ARL6IP6Q8N6S5 226 aa6.52□□□□□ -1.37
CDKN2A-211ENST00000577854 SFT2D1Q8WV19 159 aa6.52□□□□□ -1.37
CDKN2A-211ENST00000577854 TMED6Q8WW62 240 aa6.52□□□□□ -1.37
CDKN2A-211ENST00000577854 EPDR1Q9UM22 224 aa6.52□□□□□ -1.37
CDKN2A-211ENST00000577854 PSG8Q9UQ74 426 aa6.52□□□□□ -1.37
CDKN2A-211ENST00000577854 LYSTQ99698 3801 aa6.51□□□□□ -1.37
CDKN2A-211ENST00000577854 IGLV2-18A0A075B6J9 118 aa6.51□□□□□ -1.37
CDKN2A-211ENST00000577854 TRAV34A0A0B4J273 112 aa6.51□□□□□ -1.37
CDKN2A-211ENST00000577854 A0A1W2PRE2 83 aa6.51□□□□□ -1.37
CDKN2A-211ENST00000577854 M0R2N4 97 aa6.51□□□□□ -1.37
CDKN2A-211ENST00000577854 PEX7O00628 323 aa6.51□□□□□ -1.37
CDKN2A-211ENST00000577854 GCGP01275 180 aa6.51□□□□□ -1.37
CDKN2A-211ENST00000577854 SEC11BP0C7V7 166 aa6.51□□□□□ -1.37
CDKN2A-211ENST00000577854 UBE2G1P62253 170 aa6.51□□□□□ -1.37
CDKN2A-211ENST00000577854 SMUG1Q53HV7 270 aa6.51□□□□□ -1.37
CDKN2A-211ENST00000577854 IBA57Q5T440 356 aaKnown RBP6.51□□□□□ -1.37
CDKN2A-211ENST00000577854 Q6AWC8 147 aa6.51□□□□□ -1.37
CDKN2A-211ENST00000577854 POM121L12Q8N7R1 296 aa6.51□□□□□ -1.37
CDKN2A-211ENST00000577854 C8orf49Q96NF6 230 aa6.51□□□□□ -1.37
CDKN2A-211ENST00000577854 LINC00467Q9BRT7 94 aa6.51□□□□□ -1.37
CDKN2A-211ENST00000577854 SDF2L1Q9HCN8 221 aa6.51□□□□□ -1.37
CDKN2A-211ENST00000577854 FAM74A7A6NL05 159 aa6.5□□□□□ -1.37
CDKN2A-211ENST00000577854 UMAD1C9J7I0 102 aa6.5□□□□□ -1.37
CDKN2A-211ENST00000577854 TMEM75Q8N9X5 138 aa6.5□□□□□ -1.37
CDKN2A-211ENST00000577854 C11orf72Q8NBR9 251 aa6.5□□□□□ -1.37
CDKN2A-211ENST00000577854 LINC00479Q96M42 142 aa6.5□□□□□ -1.37
CDKN2A-211ENST00000577854 NKX6-2Q9C056 277 aaPredicted RBP6.5□□□□□ -1.37
CDKN2A-211ENST00000577854 DYNC2H1Q8NCM8 4307 aaKnown RBP6.49□□□□□ -1.37
CDKN2A-211ENST00000577854 HYDINQ4G0P3 5121 aa6.49□□□□□ -1.37
CDKN2A-211ENST00000577854 TRGV4A0A0C4DH28 118 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms