RNA–Protein interactions for RNA: ENST00000575637.1

CHRNE-203, Transcript of cholinergic receptor nicotinic epsilon subunit, humanhuman

TSL 3

Gene CHRNE, Length 557 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNE-203ENST00000575637 TMPRSS5Q9H3S3 457 aa12.44□□□□□ -0.42
CHRNE-203ENST00000575637 IGHV1OR15-1A0A075B7D0 117 aa12.43□□□□□ -0.42
CHRNE-203ENST00000575637 KANTRA0A1W2PQU2 76 aa12.43□□□□□ -0.42
CHRNE-203ENST00000575637 CBY3A6NI87 242 aa12.43□□□□□ -0.42
CHRNE-203ENST00000575637 FGF8P55075 233 aaPredicted RBP12.43□□□□□ -0.42
CHRNE-203ENST00000575637 SUMO1P63165 101 aaKnown RBP12.43□□□□□ -0.42
CHRNE-203ENST00000575637 ANXA2RQ3ZCQ2 193 aa12.43□□□□□ -0.42
CHRNE-203ENST00000575637 LINC00612Q8N6U2 182 aa12.43□□□□□ -0.42
CHRNE-203ENST00000575637 C11orf72Q8NBR9 251 aa12.43□□□□□ -0.42
CHRNE-203ENST00000575637 ZNF680Q8NEM1 530 aa12.43□□□□□ -0.42
CHRNE-203ENST00000575637 TVP23CQ96ET8 276 aa12.43□□□□□ -0.42
CHRNE-203ENST00000575637 ZNF471Q9BX82 626 aaPredicted RBP12.43□□□□□ -0.42
CHRNE-203ENST00000575637 GSN-AS1Q9NRJ2 163 aa12.43□□□□□ -0.42
CHRNE-203ENST00000575637 RGS13O14921 159 aa12.42□□□□□ -0.42
CHRNE-203ENST00000575637 TCRAP04437 139 aa12.42□□□□□ -0.42
CHRNE-203ENST00000575637 DAZ2Q13117 558 aaKnown RBP12.42□□□□□ -0.42
CHRNE-203ENST00000575637 TMEM88Q6PEY1 159 aa12.42□□□□□ -0.42
CHRNE-203ENST00000575637 TMUB2Q71RG4 321 aa12.42□□□□□ -0.42
CHRNE-203ENST00000575637 SGK494Q96LW2 274 aa12.42□□□□□ -0.42
CHRNE-203ENST00000575637 TP53TG3Q9ULZ0 132 aa12.42□□□□□ -0.42
CHRNE-203ENST00000575637 EPPK1P58107 5090 aaKnown RBP12.41□□□□□ -0.42
CHRNE-203ENST00000575637 SERTM2A0A1B0GWG4 89 aa12.41□□□□□ -0.42
CHRNE-203ENST00000575637 A0A1W2PRE2 83 aa12.41□□□□□ -0.42
CHRNE-203ENST00000575637 MAP1LC3B2A6NCE7 125 aa12.41□□□□□ -0.42
CHRNE-203ENST00000575637 ATP5G1P05496 136 aa12.41□□□□□ -0.42
CHRNE-203ENST00000575637 ATP5G3P48201 142 aa12.41□□□□□ -0.42
CHRNE-203ENST00000575637 FHITP49789 147 aa12.41□□□□□ -0.42
CHRNE-203ENST00000575637 Q6AWC8 147 aa12.41□□□□□ -0.42
CHRNE-203ENST00000575637 TCTE3Q8IZS6 198 aa12.41□□□□□ -0.42
CHRNE-203ENST00000575637 MAP1LC3BQ9GZQ8 125 aa12.41□□□□□ -0.42
CHRNE-203ENST00000575637 EPDR1Q9UM22 224 aa12.41□□□□□ -0.42
CHRNE-203ENST00000575637 DNAH10Q8IVF4 4471 aa12.41□□□□□ -0.42
CHRNE-203ENST00000575637 GAGE12BA1L429 117 aa12.4□□□□□ -0.42
CHRNE-203ENST00000575637 F5H768 121 aa12.4□□□□□ -0.42
CHRNE-203ENST00000575637 GAGE7O76087 117 aa12.4□□□□□ -0.42
CHRNE-203ENST00000575637 SEC11BP0C7V7 166 aa12.4□□□□□ -0.42
CHRNE-203ENST00000575637 GAGE12FP0CL80 117 aa12.4□□□□□ -0.42
CHRNE-203ENST00000575637 GAGE12GP0CL81 117 aa12.4□□□□□ -0.42
CHRNE-203ENST00000575637 GAGE12IP0CL82 117 aa12.4□□□□□ -0.42
CHRNE-203ENST00000575637 UBE2G2P60604 165 aa12.4□□□□□ -0.42
CHRNE-203ENST00000575637 MUC21Q5SSG8 566 aa12.4□□□□□ -0.42
CHRNE-203ENST00000575637 Q6ZTI0 123 aa12.4□□□□□ -0.42
CHRNE-203ENST00000575637 KLF12Q9Y4X4 402 aa12.4□□□□□ -0.42
CHRNE-203ENST00000575637 F6UZH7 168 aa12.39□□□□□ -0.43
CHRNE-203ENST00000575637 PFDN1O60925 122 aa12.39□□□□□ -0.43
CHRNE-203ENST00000575637 TCL1AP56279 114 aa12.39□□□□□ -0.43
CHRNE-203ENST00000575637 IBA57Q5T440 356 aaKnown RBP12.39□□□□□ -0.43
CHRNE-203ENST00000575637 TREM1Q9NP99 234 aa12.39□□□□□ -0.43
CHRNE-203ENST00000575637 FAM74A7A6NL05 159 aa12.38□□□□□ -0.43
CHRNE-203ENST00000575637 K7EQM0 130 aa12.38□□□□□ -0.43
CHRNE-203ENST00000575637 IGLV2-11P01706 119 aa12.38□□□□□ -0.43
CHRNE-203ENST00000575637 CYB561D1Q8N8Q1 229 aa12.38□□□□□ -0.43
CHRNE-203ENST00000575637 ATG101Q9BSB4 218 aa12.38□□□□□ -0.43
CHRNE-203ENST00000575637 PSG8Q9UQ74 426 aa12.38□□□□□ -0.43
CHRNE-203ENST00000575637 hCG_2014768A0A024R1R8 64 aa12.37□□□□□ -0.43
CHRNE-203ENST00000575637 UMAD1C9J7I0 102 aa12.37□□□□□ -0.43
CHRNE-203ENST00000575637 P0DMU3 169 aa12.37□□□□□ -0.43
CHRNE-203ENST00000575637 FAM231AP0DMU4 169 aa12.37□□□□□ -0.43
CHRNE-203ENST00000575637 FAM231CP0DMU5 169 aa12.37□□□□□ -0.43
CHRNE-203ENST00000575637 EIF5AP63241 154 aaKnown RBP12.37□□□□□ -0.43
CHRNE-203ENST00000575637 LGALSLQ3ZCW2 172 aaPredicted RBP12.37□□□□□ -0.43
CHRNE-203ENST00000575637 STOML3Q8TAV4 291 aa12.37□□□□□ -0.43
CHRNE-203ENST00000575637 FAM213BQ8TBF2 198 aa12.37□□□□□ -0.43
CHRNE-203ENST00000575637 TRGV1A0A0A0MS02 117 aa12.36□□□□□ -0.43
CHRNE-203ENST00000575637 SPINK4O60575 86 aa12.36□□□□□ -0.43
CHRNE-203ENST00000575637 IFNA7P01567 189 aa12.36□□□□□ -0.43
CHRNE-203ENST00000575637 TPT1P13693 172 aaKnown RBP12.36□□□□□ -0.43
CHRNE-203ENST00000575637 FLI1Q01543 452 aaPredicted RBP12.36□□□□□ -0.43
CHRNE-203ENST00000575637 FAM159AQ6UWV7 190 aa12.36□□□□□ -0.43
CHRNE-203ENST00000575637 TMEM75Q8N9X5 138 aa12.36□□□□□ -0.43
CHRNE-203ENST00000575637 LINC00479Q96M42 142 aa12.36□□□□□ -0.43
CHRNE-203ENST00000575637 C8orf49Q96NF6 230 aa12.36□□□□□ -0.43
CHRNE-203ENST00000575637 NDFIP1Q9BT67 221 aa12.36□□□□□ -0.43
CHRNE-203ENST00000575637 NAGKQ9UJ70 344 aa12.36□□□□□ -0.43
CHRNE-203ENST00000575637 TRAV34A0A0B4J273 112 aa12.35□□□□□ -0.43
CHRNE-203ENST00000575637 TRAV21A0A0B4J279 112 aa12.35□□□□□ -0.43
CHRNE-203ENST00000575637 C1QBP02746 253 aa12.35□□□□□ -0.43
CHRNE-203ENST00000575637 HOXA5P20719 270 aa12.35□□□□□ -0.43
CHRNE-203ENST00000575637 ZNF415Q09FC8 603 aa12.35□□□□□ -0.43
CHRNE-203ENST00000575637 TMEM183BQ1AE95 376 aa12.35□□□□□ -0.43
CHRNE-203ENST00000575637 TDRG1Q3Y452 100 aa12.35□□□□□ -0.43
CHRNE-203ENST00000575637 PRNTQ86SH4 94 aa12.35□□□□□ -0.43
CHRNE-203ENST00000575637 TMEM183AQ8IXX5 376 aa12.35□□□□□ -0.43
CHRNE-203ENST00000575637 C15orf53Q8NAA6 179 aa12.35□□□□□ -0.43
CHRNE-203ENST00000575637 SFT2D1Q8WV19 159 aa12.35□□□□□ -0.43
CHRNE-203ENST00000575637 MBD3L1Q8WWY6 194 aa12.35□□□□□ -0.43
CHRNE-203ENST00000575637 NKX6-2Q9C056 277 aaPredicted RBP12.35□□□□□ -0.43
CHRNE-203ENST00000575637 MDFICQ9P1T7 246 aa12.35□□□□□ -0.43
CHRNE-203ENST00000575637 TRGV2A0A075B6R0 118 aa12.34□□□□□ -0.43
CHRNE-203ENST00000575637 PEX7O00628 323 aa12.34□□□□□ -0.43
CHRNE-203ENST00000575637 ZNF80P51504 273 aaPredicted RBP12.34□□□□□ -0.43
CHRNE-203ENST00000575637 OR5I1Q13606 314 aa12.34□□□□□ -0.43
CHRNE-203ENST00000575637 AKAP14Q86UN6 197 aa12.34□□□□□ -0.43
CHRNE-203ENST00000575637 POM121L12Q8N7R1 296 aa12.34□□□□□ -0.43
CHRNE-203ENST00000575637 C18orf15Q96N68 181 aa12.34□□□□□ -0.43
CHRNE-203ENST00000575637 MRPL16Q9NX20 251 aaKnown RBP12.34□□□□□ -0.43
CHRNE-203ENST00000575637 TRGV11A0A075B6L2 103 aa12.33□□□□□ -0.44
CHRNE-203ENST00000575637 A0A1B0GV50 99 aa12.33□□□□□ -0.44
CHRNE-203ENST00000575637 FBLL1A6NHQ2 334 aaKnown RBP12.33□□□□□ -0.44
CHRNE-203ENST00000575637 DPPA3Q6W0C5 159 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms