RNA–Protein interactions for RNA: ENST00000573577.5

RPAIN-213, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,282 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-213ENST00000573577 TRAV12-3A0A0B4J271 114 aa9.75□□□□□ -0.85
RPAIN-213ENST00000573577 NUPR2A6NF83 97 aa9.75□□□□□ -0.85
RPAIN-213ENST00000573577 RNASE4P34096 147 aaKnown RBP9.75□□□□□ -0.85
RPAIN-213ENST00000573577 KIR3DS1Q14943 382 aa9.75□□□□□ -0.85
RPAIN-213ENST00000573577 ALKAL2Q6UX46 152 aa9.75□□□□□ -0.85
RPAIN-213ENST00000573577 TMEM75Q8N9X5 138 aa9.75□□□□□ -0.85
RPAIN-213ENST00000573577 MANBALQ9NQG1 85 aa9.75□□□□□ -0.85
RPAIN-213ENST00000573577 LCE6AA0A183 80 aa9.74□□□□□ -0.85
RPAIN-213ENST00000573577 TEX48A0A1B0GUV7 120 aa9.74□□□□□ -0.85
RPAIN-213ENST00000573577 LOC102723971A0A1B0GUV8 181 aa9.74□□□□□ -0.85
RPAIN-213ENST00000573577 PEX7O00628 323 aa9.74□□□□□ -0.85
RPAIN-213ENST00000573577 PAGE4O60829 102 aa9.74□□□□□ -0.85
RPAIN-213ENST00000573577 RBMY1A1P0DJD3 496 aaKnown RBP9.74□□□□□ -0.85
RPAIN-213ENST00000573577 RBMY1CP0DJD4 496 aa9.74□□□□□ -0.85
RPAIN-213ENST00000573577 BLOC1S1P78537 153 aa9.74□□□□□ -0.85
RPAIN-213ENST00000573577 RBMY1FQ15415 496 aaKnown RBP9.74□□□□□ -0.85
RPAIN-213ENST00000573577 CCDC28AQ8IWP9 274 aa9.74□□□□□ -0.85
RPAIN-213ENST00000573577 ZFAND2AQ8N6M9 145 aa9.74□□□□□ -0.85
RPAIN-213ENST00000573577 C11orf45Q8TAV5 145 aa9.74□□□□□ -0.85
RPAIN-213ENST00000573577 PYGO2Q9BRQ0 406 aa9.74□□□□□ -0.85
RPAIN-213ENST00000573577 TRAV8-1A0A0A6YYK1 113 aa9.73□□□□□ -0.85
RPAIN-213ENST00000573577 ZNF705GA8MUZ8 300 aaPredicted RBP9.73□□□□□ -0.85
RPAIN-213ENST00000573577 IFNA1P01562 189 aa9.73□□□□□ -0.85
RPAIN-213ENST00000573577 HTN1P15515 57 aa9.73□□□□□ -0.85
RPAIN-213ENST00000573577 FLI1Q01543 452 aaPredicted RBP9.73□□□□□ -0.85
RPAIN-213ENST00000573577 BTN1A1Q13410 526 aa9.73□□□□□ -0.85
RPAIN-213ENST00000573577 CEMP1Q6PRD7 247 aaPredicted RBP9.73□□□□□ -0.85
RPAIN-213ENST00000573577 ZNF493Q6ZR52 646 aa9.73□□□□□ -0.85
RPAIN-213ENST00000573577 C16orf74Q96GX8 76 aa9.73□□□□□ -0.85
RPAIN-213ENST00000573577 TXNDC17Q9BRA2 123 aa9.73□□□□□ -0.85
RPAIN-213ENST00000573577 TREM1Q9NP99 234 aa9.73□□□□□ -0.85
RPAIN-213ENST00000573577 PLECQ15149 4684 aaKnown RBP9.73□□□□□ -0.85
RPAIN-213ENST00000573577 C11orf94C9JXX5 98 aa9.72□□□□□ -0.85
RPAIN-213ENST00000573577 LORP23490 312 aaPredicted RBP9.72□□□□□ -0.85
RPAIN-213ENST00000573577 EMP1P54849 157 aa9.72□□□□□ -0.85
RPAIN-213ENST00000573577 NANOS2P60321 138 aaKnown RBP9.72□□□□□ -0.85
RPAIN-213ENST00000573577 SAPCD1Q5SSQ6 148 aa9.72□□□□□ -0.85
RPAIN-213ENST00000573577 TMEM263Q8WUH6 116 aaKnown RBP9.72□□□□□ -0.85
RPAIN-213ENST00000573577 PHLDA1Q8WV24 401 aaPredicted RBP9.72□□□□□ -0.85
RPAIN-213ENST00000573577 LYSTQ99698 3801 aa9.72□□□□□ -0.85
RPAIN-213ENST00000573577 GNG13Q9P2W3 67 aa9.72□□□□□ -0.85
RPAIN-213ENST00000573577 PSG8Q9UQ74 426 aa9.72□□□□□ -0.85
RPAIN-213ENST00000573577 RGS13O14921 159 aa9.71□□□□□ -0.86
RPAIN-213ENST00000573577 ZNF324O75467 553 aaPredicted RBP9.71□□□□□ -0.86
RPAIN-213ENST00000573577 SPART-AS1P0CW21 52 aa9.71□□□□□ -0.86
RPAIN-213ENST00000573577 TAGLN2P37802 199 aaKnown RBP9.71□□□□□ -0.86
RPAIN-213ENST00000573577 AKR1C3P42330 323 aa9.71□□□□□ -0.86
RPAIN-213ENST00000573577 ATP5G3P48201 142 aa9.71□□□□□ -0.86
RPAIN-213ENST00000573577 UBE2G1P62253 170 aa9.71□□□□□ -0.86
RPAIN-213ENST00000573577 Q6AWC8 147 aa9.71□□□□□ -0.86
RPAIN-213ENST00000573577 PRNTQ86SH4 94 aa9.71□□□□□ -0.86
RPAIN-213ENST00000573577 FMC1Q96HJ9 113 aa9.71□□□□□ -0.86
RPAIN-213ENST00000573577 SGK494Q96LW2 274 aa9.71□□□□□ -0.86
RPAIN-213ENST00000573577 LINC00467Q9BRT7 94 aa9.71□□□□□ -0.86
RPAIN-213ENST00000573577 KLK5Q9Y337 293 aaPredicted RBP9.71□□□□□ -0.86
RPAIN-213ENST00000573577 TRAV21A0A0B4J279 112 aa9.7□□□□□ -0.86
RPAIN-213ENST00000573577 IGLV2-11P01706 119 aa9.7□□□□□ -0.86
RPAIN-213ENST00000573577 S100A9P06702 114 aaKnown RBP9.7□□□□□ -0.86
RPAIN-213ENST00000573577 CCL20P78556 96 aa9.7□□□□□ -0.86
RPAIN-213ENST00000573577 PRR9Q5T870 116 aa9.7□□□□□ -0.86
RPAIN-213ENST00000573577 EIF4E3Q8N5X7 224 aaKnown RBP9.7□□□□□ -0.86
RPAIN-213ENST00000573577 ZNF680Q8NEM1 530 aa9.7□□□□□ -0.86
RPAIN-213ENST00000573577 IGHV1OR15-1A0A075B7D0 117 aa9.69□□□□□ -0.86
RPAIN-213ENST00000573577 TRAV34A0A0B4J273 112 aa9.69□□□□□ -0.86
RPAIN-213ENST00000573577 CBY3A6NI87 242 aa9.69□□□□□ -0.86
RPAIN-213ENST00000573577 LYRM9A8MSI8 78 aa9.69□□□□□ -0.86
RPAIN-213ENST00000573577 AZU1P20160 251 aa9.69□□□□□ -0.86
RPAIN-213ENST00000573577 ANXA2RQ3ZCQ2 193 aa9.69□□□□□ -0.86
RPAIN-213ENST00000573577 SMUG1Q53HV7 270 aa9.69□□□□□ -0.86
RPAIN-213ENST00000573577 RNASE8Q8TDE3 154 aaKnown RBP9.69□□□□□ -0.86
RPAIN-213ENST00000573577 LINC00479Q96M42 142 aa9.69□□□□□ -0.86
RPAIN-213ENST00000573577 DKK2Q9UBU2 259 aa9.69□□□□□ -0.86
RPAIN-213ENST00000573577 ZFP30Q9Y2G7 519 aa9.69□□□□□ -0.86
RPAIN-213ENST00000573577 TIMM8BQ9Y5J9 83 aaPredicted RBP9.69□□□□□ -0.86
RPAIN-213ENST00000573577 DNAH1Q9P2D7 4330 aa9.69□□□□□ -0.86
RPAIN-213ENST00000573577 SNURFLB1AK76 121 aa9.68□□□□□ -0.86
RPAIN-213ENST00000573577 PRM2P04554 102 aa9.68□□□□□ -0.86
RPAIN-213ENST00000573577 BCL2P10415 239 aa9.68□□□□□ -0.86
RPAIN-213ENST00000573577 TMEM183BQ1AE95 376 aa9.68□□□□□ -0.86
RPAIN-213ENST00000573577 FAM222AQ5U5X8 452 aa9.68□□□□□ -0.86
RPAIN-213ENST00000573577 FAM159AQ6UWV7 190 aa9.68□□□□□ -0.86
RPAIN-213ENST00000573577 Q86TA4 180 aa9.68□□□□□ -0.86
RPAIN-213ENST00000573577 TVP23CQ96ET8 276 aa9.68□□□□□ -0.86
RPAIN-213ENST00000573577 CELA1Q9UNI1 258 aa9.68□□□□□ -0.86
RPAIN-213ENST00000573577 KLF12Q9Y4X4 402 aa9.68□□□□□ -0.86
RPAIN-213ENST00000573577 TRBV6-1A0A0K0K1D8 114 aa9.67□□□□□ -0.86
RPAIN-213ENST00000573577 SCO2A0A1W2PP80 73 aa9.67□□□□□ -0.86
RPAIN-213ENST00000573577 PDE6DO43924 150 aa9.67□□□□□ -0.86
RPAIN-213ENST00000573577 GCGP01275 180 aa9.67□□□□□ -0.86
RPAIN-213ENST00000573577 PFN1P07737 140 aaKnown RBP9.67□□□□□ -0.86
RPAIN-213ENST00000573577 MEF2BQ02080 365 aaPredicted RBP9.67□□□□□ -0.86
RPAIN-213ENST00000573577 TEX261Q6UWH6 196 aa9.67□□□□□ -0.86
RPAIN-213ENST00000573577 LYPD6BQ8NI32 183 aa9.67□□□□□ -0.86
RPAIN-213ENST00000573577 C2CD4CQ8TF44 421 aa9.67□□□□□ -0.86
RPAIN-213ENST00000573577 C8orf49Q96NF6 230 aa9.67□□□□□ -0.86
RPAIN-213ENST00000573577 VAX2Q9UIW0 290 aa9.67□□□□□ -0.86
RPAIN-213ENST00000573577 TRGV11A0A075B6L2 103 aa9.66□□□□□ -0.86
RPAIN-213ENST00000573577 PLAC8L1A1L4L8 177 aa9.66□□□□□ -0.86
RPAIN-213ENST00000573577 DAD1P61803 113 aa9.66□□□□□ -0.86
RPAIN-213ENST00000573577 IBA57Q5T440 356 aaKnown RBP9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms