RNA–Protein interactions for RNA: ENST00000573018.1

ERCC4-204, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 2

Gene ERCC4, Length 523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-204ENST00000573018 CCL13Q99616 98 aa2.05□□□□□ -2.08
ERCC4-204ENST00000573018 SLC50A1Q9BRV3 221 aa2.05□□□□□ -2.08
ERCC4-204ENST00000573018 DERL1Q9BUN8 251 aa2.05□□□□□ -2.08
ERCC4-204ENST00000573018 SLC25A2Q9BXI2 301 aa2.05□□□□□ -2.08
ERCC4-204ENST00000573018 SNHG12Q9BXW3 62 aa2.05□□□□□ -2.08
ERCC4-204ENST00000573018 HES7Q9BYE0 225 aa2.05□□□□□ -2.08
ERCC4-204ENST00000573018 SLC25A39Q9BZJ4 359 aaPredicted RBP2.05□□□□□ -2.08
ERCC4-204ENST00000573018 FGF23Q9GZV9 251 aaPredicted RBP2.05□□□□□ -2.08
ERCC4-204ENST00000573018 RNASE7Q9H1E1 156 aaKnown RBP2.05□□□□□ -2.08
ERCC4-204ENST00000573018 TMEM133Q9H2Q1 129 aa2.05□□□□□ -2.08
ERCC4-204ENST00000573018 MAP1LC3AQ9H492 121 aa2.05□□□□□ -2.08
ERCC4-204ENST00000573018 LPAR2Q9HBW0 351 aa2.05□□□□□ -2.08
ERCC4-204ENST00000573018 SPANXA1Q9NS26 97 aa2.05□□□□□ -2.08
ERCC4-204ENST00000573018 KLF12Q9Y4X4 402 aa2.05□□□□□ -2.08
ERCC4-204ENST00000573018 F11RQ9Y624 299 aaKnown RBP2.05□□□□□ -2.08
ERCC4-204ENST00000573018 ARHGAP21Q5T5U3 1957 aa2.05□□□□□ -2.08
ERCC4-204ENST00000573018 SDK2Q58EX2 2172 aa2.05□□□□□ -2.08
ERCC4-204ENST00000573018 KNTC1P50748 2209 aa2.05□□□□□ -2.08
ERCC4-204ENST00000573018 ZDBF2Q9HCK1 2354 aa2.05□□□□□ -2.08
ERCC4-204ENST00000573018 MAP1BP46821 2468 aaKnown RBP2.05□□□□□ -2.08
ERCC4-204ENST00000573018 CHD7Q9P2D1 2997 aa2.04□□□□□ -2.08
ERCC4-204ENST00000573018 IGHV3OR15-7A0A075B7D8 119 aa2.04□□□□□ -2.08
ERCC4-204ENST00000573018 LOC102724200A0A096LPH7 203 aaPredicted RBP2.04□□□□□ -2.08
ERCC4-204ENST00000573018 IGHV2-26A0A0B4J1V2 119 aa2.04□□□□□ -2.08
ERCC4-204ENST00000573018 PPIAL4CA0A0B4J2A2 164 aa2.04□□□□□ -2.08
ERCC4-204ENST00000573018 IGHV3-64DA0A0J9YX35 117 aa2.04□□□□□ -2.08
ERCC4-204ENST00000573018 C7orf71A4D174 169 aa2.04□□□□□ -2.08
ERCC4-204ENST00000573018 GGTLC3B5MD39 225 aa2.04□□□□□ -2.08
ERCC4-204ENST00000573018 SYS1-DBNDD2H3BUS1 97 aa2.04□□□□□ -2.08
ERCC4-204ENST00000573018 K7EM74 188 aa2.04□□□□□ -2.08
ERCC4-204ENST00000573018 M0R1W7 72 aa2.04□□□□□ -2.08
ERCC4-204ENST00000573018 NBR2O15453 112 aa2.04□□□□□ -2.08
ERCC4-204ENST00000573018 CD5LO43866 347 aa2.04□□□□□ -2.08
ERCC4-204ENST00000573018 SPINK4O60575 86 aa2.04□□□□□ -2.08
ERCC4-204ENST00000573018 MOSP00540 346 aa2.04□□□□□ -2.08
ERCC4-204ENST00000573018 C3orf79P0CE67 100 aa2.04□□□□□ -2.08
ERCC4-204ENST00000573018 SMIM17P0DL12 118 aa2.04□□□□□ -2.08
ERCC4-204ENST00000573018 PPIAL4GP0DN37 164 aa2.04□□□□□ -2.08
ERCC4-204ENST00000573018 IGHV1-8P0DP01 117 aa2.04□□□□□ -2.08
ERCC4-204ENST00000573018 PLNP26678 52 aa2.04□□□□□ -2.08
ERCC4-204ENST00000573018 CKS2P33552 79 aa2.04□□□□□ -2.08
ERCC4-204ENST00000573018 CCL8P80075 99 aa2.04□□□□□ -2.08
ERCC4-204ENST00000573018 RHOGP84095 191 aa2.04□□□□□ -2.08
ERCC4-204ENST00000573018 SMAGPQ0VAQ4 97 aa2.04□□□□□ -2.08
ERCC4-204ENST00000573018 GTF3C1Q12789 2109 aa2.04□□□□□ -2.08
ERCC4-204ENST00000573018 HES1Q14469 280 aa2.04□□□□□ -2.08
ERCC4-204ENST00000573018 FXYD3Q14802 87 aa2.04□□□□□ -2.08
ERCC4-204ENST00000573018 PRSS8Q16651 343 aa2.04□□□□□ -2.08
ERCC4-204ENST00000573018 GCSAMLQ5JQS6 135 aa2.04□□□□□ -2.08
ERCC4-204ENST00000573018 C9orf129Q5T035 196 aaKnown RBP2.04□□□□□ -2.08
ERCC4-204ENST00000573018 TMEM78Q5T7P6 136 aa2.04□□□□□ -2.08
ERCC4-204ENST00000573018 MINOS1Q5TGZ0 78 aa2.04□□□□□ -2.08
ERCC4-204ENST00000573018 Q6ZS92 163 aa2.04□□□□□ -2.08
ERCC4-204ENST00000573018 SPATA12Q7Z6I5 190 aa2.04□□□□□ -2.08
ERCC4-204ENST00000573018 PRNTQ86SH4 94 aa2.04□□□□□ -2.08
ERCC4-204ENST00000573018 Q86TA4 180 aa2.04□□□□□ -2.08
ERCC4-204ENST00000573018 NIT1Q86X76 327 aa2.04□□□□□ -2.08
ERCC4-204ENST00000573018 CEND1Q8N111 149 aa2.04□□□□□ -2.08
ERCC4-204ENST00000573018 TMEM256Q8N2U0 113 aa2.04□□□□□ -2.08
ERCC4-204ENST00000573018 KIR3DL3Q8N743 410 aa2.04□□□□□ -2.08
ERCC4-204ENST00000573018 FDCSPQ8NFU4 85 aa2.04□□□□□ -2.08
ERCC4-204ENST00000573018 MYOZ3Q8TDC0 251 aa2.04□□□□□ -2.08
ERCC4-204ENST00000573018 COPS9Q8WXC6 57 aa2.04□□□□□ -2.08
ERCC4-204ENST00000573018 ARPC1AQ92747 370 aa2.04□□□□□ -2.08
ERCC4-204ENST00000573018 VSIG2Q96IQ7 327 aa2.04□□□□□ -2.08
ERCC4-204ENST00000573018 PGLYRP4Q96LB8 373 aa2.04□□□□□ -2.08
ERCC4-204ENST00000573018 IGF2BP2-AS1Q96M15 143 aa2.04□□□□□ -2.08
ERCC4-204ENST00000573018 TPPP3Q9BW30 176 aa2.04□□□□□ -2.08
ERCC4-204ENST00000573018 MRPL20Q9BYC9 149 aaKnown RBP2.04□□□□□ -2.08
ERCC4-204ENST00000573018 Q9H3A6 140 aa2.04□□□□□ -2.08
ERCC4-204ENST00000573018 DPM3Q9P2X0 92 aa2.04□□□□□ -2.08
ERCC4-204ENST00000573018 ONECUT1Q9UBC0 465 aa2.04□□□□□ -2.08
ERCC4-204ENST00000573018 FZR1Q9UM11 496 aa2.04□□□□□ -2.08
ERCC4-204ENST00000573018 RFNGQ9Y644 331 aa2.04□□□□□ -2.08
ERCC4-204ENST00000573018 MINOS1-NBL1R4GNA1 71 aa2.04□□□□□ -2.08
ERCC4-204ENST00000573018 NCOR1O75376 2440 aa2.03□□□□□ -2.08
ERCC4-204ENST00000573018 ZNF407Q9C0G0 2248 aa2.03□□□□□ -2.08
ERCC4-204ENST00000573018 CACNA1DQ01668 2161 aa2.03□□□□□ -2.08
ERCC4-204ENST00000573018 KIAA2026Q5HYC2 2103 aa2.03□□□□□ -2.08
ERCC4-204ENST00000573018 DOCK11Q5JSL3 2073 aa2.03□□□□□ -2.08
ERCC4-204ENST00000573018 TRBV20OR9-2A0A075B6H5 130 aa2.03□□□□□ -2.08
ERCC4-204ENST00000573018 TRBV7-1A0A0A6YYK4 115 aa2.03□□□□□ -2.08
ERCC4-204ENST00000573018 IGHV1-3A0A0C4DH29 117 aa2.03□□□□□ -2.08
ERCC4-204ENST00000573018 IGHV3-35A0A0C4DH35 117 aa2.03□□□□□ -2.08
ERCC4-204ENST00000573018 IGHV2-70DA0A0C4DH43 119 aa2.03□□□□□ -2.08
ERCC4-204ENST00000573018 RBAKDNA6NC62 111 aa2.03□□□□□ -2.08
ERCC4-204ENST00000573018 FABP5P3A8MUU1 101 aa2.03□□□□□ -2.08
ERCC4-204ENST00000573018 H0Y8G0 127 aa2.03□□□□□ -2.08
ERCC4-204ENST00000573018 K7EN84 100 aa2.03□□□□□ -2.08
ERCC4-204ENST00000573018 K7EP13 123 aa2.03□□□□□ -2.08
ERCC4-204ENST00000573018 TCF21O43680 179 aa2.03□□□□□ -2.08
ERCC4-204ENST00000573018 DPM2O94777 84 aa2.03□□□□□ -2.08
ERCC4-204ENST00000573018 IGKV1-16P04430 117 aa2.03□□□□□ -2.08
ERCC4-204ENST00000573018 IL4P05112 153 aa2.03□□□□□ -2.08
ERCC4-204ENST00000573018 SMIM13P0DJ93 91 aa2.03□□□□□ -2.08
ERCC4-204ENST00000573018 CGB3P0DN86 165 aa2.03□□□□□ -2.08
ERCC4-204ENST00000573018 CGB7P0DN87 165 aa2.03□□□□□ -2.08
ERCC4-204ENST00000573018 HLA-DRB4P13762 266 aa2.03□□□□□ -2.08
ERCC4-204ENST00000573018 SLC25A16P16260 332 aa2.03□□□□□ -2.08
ERCC4-204ENST00000573018 HINT1P49773 126 aaPredicted RBP2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms