RNA–Protein interactions for RNA: ENST00000566482.5

CNEP1R1-208, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best)

Gene CNEP1R1, Length 826 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-208ENST00000566482 SUMO1P63165 101 aaKnown RBP9.12□□□□□ -0.95
CNEP1R1-208ENST00000566482 TCTE3Q8IZS6 198 aa9.12□□□□□ -0.95
CNEP1R1-208ENST00000566482 EIF4E3Q8N5X7 224 aaKnown RBP9.12□□□□□ -0.95
CNEP1R1-208ENST00000566482 TMED6Q8WW62 240 aa9.12□□□□□ -0.95
CNEP1R1-208ENST00000566482 NDUFAF3Q9BU61 184 aa9.12□□□□□ -0.95
CNEP1R1-208ENST00000566482 TMPRSS5Q9H3S3 457 aa9.12□□□□□ -0.95
CNEP1R1-208ENST00000566482 hCG_2014768A0A024R1R8 64 aa9.11□□□□□ -0.95
CNEP1R1-208ENST00000566482 MAP1LC3B2A6NCE7 125 aa9.11□□□□□ -0.95
CNEP1R1-208ENST00000566482 CBY3A6NI87 242 aa9.11□□□□□ -0.95
CNEP1R1-208ENST00000566482 SNURFLB1AK76 121 aa9.11□□□□□ -0.95
CNEP1R1-208ENST00000566482 RGS13O14921 159 aa9.11□□□□□ -0.95
CNEP1R1-208ENST00000566482 PFDN1O60925 122 aa9.11□□□□□ -0.95
CNEP1R1-208ENST00000566482 TCRAP04437 139 aa9.11□□□□□ -0.95
CNEP1R1-208ENST00000566482 SEC11BP0C7V7 166 aa9.11□□□□□ -0.95
CNEP1R1-208ENST00000566482 ANXA2RQ3ZCQ2 193 aa9.11□□□□□ -0.95
CNEP1R1-208ENST00000566482 FAM210BQ96KR6 192 aa9.11□□□□□ -0.95
CNEP1R1-208ENST00000566482 MAP1LC3BQ9GZQ8 125 aa9.11□□□□□ -0.95
CNEP1R1-208ENST00000566482 IGHV1OR15-1A0A075B7D0 117 aa9.1□□□□□ -0.95
CNEP1R1-208ENST00000566482 SERTM2A0A1B0GWG4 89 aa9.1□□□□□ -0.95
CNEP1R1-208ENST00000566482 A0A1W2PRE2 83 aa9.1□□□□□ -0.95
CNEP1R1-208ENST00000566482 FHITP49789 147 aa9.1□□□□□ -0.95
CNEP1R1-208ENST00000566482 UBE2G2P60604 165 aa9.1□□□□□ -0.95
CNEP1R1-208ENST00000566482 DAZ2Q13117 558 aaKnown RBP9.1□□□□□ -0.95
CNEP1R1-208ENST00000566482 Q6AWC8 147 aa9.1□□□□□ -0.95
CNEP1R1-208ENST00000566482 LINC00612Q8N6U2 182 aa9.1□□□□□ -0.95
CNEP1R1-208ENST00000566482 C11orf72Q8NBR9 251 aa9.1□□□□□ -0.95
CNEP1R1-208ENST00000566482 ZNF680Q8NEM1 530 aa9.1□□□□□ -0.95
CNEP1R1-208ENST00000566482 TVP23CQ96ET8 276 aa9.1□□□□□ -0.95
CNEP1R1-208ENST00000566482 SGK494Q96LW2 274 aa9.1□□□□□ -0.95
CNEP1R1-208ENST00000566482 GSN-AS1Q9NRJ2 163 aa9.1□□□□□ -0.95
CNEP1R1-208ENST00000566482 TP53TG3Q9ULZ0 132 aa9.1□□□□□ -0.95
CNEP1R1-208ENST00000566482 EPDR1Q9UM22 224 aa9.1□□□□□ -0.95
CNEP1R1-208ENST00000566482 GAGE12BA1L429 117 aa9.09□□□□□ -0.95
CNEP1R1-208ENST00000566482 UMAD1C9J7I0 102 aa9.09□□□□□ -0.95
CNEP1R1-208ENST00000566482 F6UZH7 168 aa9.09□□□□□ -0.95
CNEP1R1-208ENST00000566482 K7EQM0 130 aa9.09□□□□□ -0.95
CNEP1R1-208ENST00000566482 GAGE7O76087 117 aa9.09□□□□□ -0.95
CNEP1R1-208ENST00000566482 C1QBP02746 253 aa9.09□□□□□ -0.95
CNEP1R1-208ENST00000566482 ATP5G1P05496 136 aa9.09□□□□□ -0.95
CNEP1R1-208ENST00000566482 GAGE12FP0CL80 117 aa9.09□□□□□ -0.95
CNEP1R1-208ENST00000566482 GAGE12GP0CL81 117 aa9.09□□□□□ -0.95
CNEP1R1-208ENST00000566482 GAGE12IP0CL82 117 aa9.09□□□□□ -0.95
CNEP1R1-208ENST00000566482 ATP5G3P48201 142 aa9.09□□□□□ -0.95
CNEP1R1-208ENST00000566482 EIF5AP63241 154 aaKnown RBP9.09□□□□□ -0.95
CNEP1R1-208ENST00000566482 LGALSLQ3ZCW2 172 aaPredicted RBP9.09□□□□□ -0.95
CNEP1R1-208ENST00000566482 MUC21Q5SSG8 566 aa9.09□□□□□ -0.95
CNEP1R1-208ENST00000566482 TMEM88Q6PEY1 159 aa9.09□□□□□ -0.95
CNEP1R1-208ENST00000566482 FAM213BQ8TBF2 198 aa9.09□□□□□ -0.95
CNEP1R1-208ENST00000566482 TREM1Q9NP99 234 aa9.09□□□□□ -0.95
CNEP1R1-208ENST00000566482 FAM74A7A6NL05 159 aa9.08□□□□□ -0.96
CNEP1R1-208ENST00000566482 F5H768 121 aa9.08□□□□□ -0.96
CNEP1R1-208ENST00000566482 IFNA7P01567 189 aa9.08□□□□□ -0.96
CNEP1R1-208ENST00000566482 TPT1P13693 172 aaKnown RBP9.08□□□□□ -0.96
CNEP1R1-208ENST00000566482 TCL1AP56279 114 aa9.08□□□□□ -0.96
CNEP1R1-208ENST00000566482 IBA57Q5T440 356 aaKnown RBP9.08□□□□□ -0.96
CNEP1R1-208ENST00000566482 Q6ZTI0 123 aa9.08□□□□□ -0.96
CNEP1R1-208ENST00000566482 CYB561D1Q8N8Q1 229 aa9.08□□□□□ -0.96
CNEP1R1-208ENST00000566482 STOML3Q8TAV4 291 aa9.08□□□□□ -0.96
CNEP1R1-208ENST00000566482 ATG101Q9BSB4 218 aa9.08□□□□□ -0.96
CNEP1R1-208ENST00000566482 NDFIP1Q9BT67 221 aa9.08□□□□□ -0.96
CNEP1R1-208ENST00000566482 KLF12Q9Y4X4 402 aa9.08□□□□□ -0.96
CNEP1R1-208ENST00000566482 IGLV2-11P01706 119 aa9.07□□□□□ -0.96
CNEP1R1-208ENST00000566482 FLI1Q01543 452 aaPredicted RBP9.07□□□□□ -0.96
CNEP1R1-208ENST00000566482 AKAP14Q86UN6 197 aa9.07□□□□□ -0.96
CNEP1R1-208ENST00000566482 TMEM75Q8N9X5 138 aa9.07□□□□□ -0.96
CNEP1R1-208ENST00000566482 C8orf49Q96NF6 230 aa9.07□□□□□ -0.96
CNEP1R1-208ENST00000566482 NAGKQ9UJ70 344 aa9.07□□□□□ -0.96
CNEP1R1-208ENST00000566482 PSG8Q9UQ74 426 aa9.07□□□□□ -0.96
CNEP1R1-208ENST00000566482 VPS13DQ5THJ4 4388 aa9.06□□□□□ -0.96
CNEP1R1-208ENST00000566482 HYDINQ4G0P3 5121 aa9.06□□□□□ -0.96
CNEP1R1-208ENST00000566482 TRGV1A0A0A0MS02 117 aa9.06□□□□□ -0.96
CNEP1R1-208ENST00000566482 TRAV34A0A0B4J273 112 aa9.06□□□□□ -0.96
CNEP1R1-208ENST00000566482 TRAV21A0A0B4J279 112 aa9.06□□□□□ -0.96
CNEP1R1-208ENST00000566482 PEX7O00628 323 aa9.06□□□□□ -0.96
CNEP1R1-208ENST00000566482 ZNF415Q09FC8 603 aa9.06□□□□□ -0.96
CNEP1R1-208ENST00000566482 FAM159AQ6UWV7 190 aa9.06□□□□□ -0.96
CNEP1R1-208ENST00000566482 DPPA3Q6W0C5 159 aa9.06□□□□□ -0.96
CNEP1R1-208ENST00000566482 PRNTQ86SH4 94 aa9.06□□□□□ -0.96
CNEP1R1-208ENST00000566482 SFT2D1Q8WV19 159 aa9.06□□□□□ -0.96
CNEP1R1-208ENST00000566482 MBD3L1Q8WWY6 194 aa9.06□□□□□ -0.96
CNEP1R1-208ENST00000566482 LINC00479Q96M42 142 aa9.06□□□□□ -0.96
CNEP1R1-208ENST00000566482 NKX6-2Q9C056 277 aaPredicted RBP9.06□□□□□ -0.96
CNEP1R1-208ENST00000566482 A0A1B0GV50 99 aa9.05□□□□□ -0.96
CNEP1R1-208ENST00000566482 SPINK4O60575 86 aa9.05□□□□□ -0.96
CNEP1R1-208ENST00000566482 P0DMU3 169 aa9.05□□□□□ -0.96
CNEP1R1-208ENST00000566482 FAM231AP0DMU4 169 aa9.05□□□□□ -0.96
CNEP1R1-208ENST00000566482 FAM231CP0DMU5 169 aa9.05□□□□□ -0.96
CNEP1R1-208ENST00000566482 TMEM183BQ1AE95 376 aa9.05□□□□□ -0.96
CNEP1R1-208ENST00000566482 TMEM183AQ8IXX5 376 aa9.05□□□□□ -0.96
CNEP1R1-208ENST00000566482 C15orf53Q8NAA6 179 aa9.05□□□□□ -0.96
CNEP1R1-208ENST00000566482 MDFICQ9P1T7 246 aa9.05□□□□□ -0.96
CNEP1R1-208ENST00000566482 TRGV11A0A075B6L2 103 aa9.04□□□□□ -0.96
CNEP1R1-208ENST00000566482 TRGV2A0A075B6R0 118 aa9.04□□□□□ -0.96
CNEP1R1-208ENST00000566482 FBLL1A6NHQ2 334 aaKnown RBP9.04□□□□□ -0.96
CNEP1R1-208ENST00000566482 PAGE4O60829 102 aa9.04□□□□□ -0.96
CNEP1R1-208ENST00000566482 PPT1P50897 306 aa9.04□□□□□ -0.96
CNEP1R1-208ENST00000566482 ZNF80P51504 273 aaPredicted RBP9.04□□□□□ -0.96
CNEP1R1-208ENST00000566482 TDRG1Q3Y452 100 aa9.04□□□□□ -0.96
CNEP1R1-208ENST00000566482 SMUG1Q53HV7 270 aa9.04□□□□□ -0.96
CNEP1R1-208ENST00000566482 CST9LP1Q5W188 147 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms