RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 C19orf73Q9NVV2 129 aa8.2□□□□□ -1.1
SF3B3-205ENST00000564899 PPP1R14DQ9NXH3 145 aa8.2□□□□□ -1.1
SF3B3-205ENST00000564899 H3BMM0 161 aa8.19□□□□□ -1.1
SF3B3-205ENST00000564899 K7EN84 100 aa8.19□□□□□ -1.1
SF3B3-205ENST00000564899 SNAPINO95295 136 aa8.19□□□□□ -1.1
SF3B3-205ENST00000564899 PRR27Q6MZM9 219 aa8.19□□□□□ -1.1
SF3B3-205ENST00000564899 STHQ8IWL8 128 aa8.19□□□□□ -1.1
SF3B3-205ENST00000564899 ZC2HC1AQ96GY0 325 aa8.19□□□□□ -1.1
SF3B3-205ENST00000564899 ODF3Q96PU9 254 aa8.19□□□□□ -1.1
SF3B3-205ENST00000564899 MLST8Q9BVC4 326 aa8.19□□□□□ -1.1
SF3B3-205ENST00000564899 KRTAP17-1Q9BYP8 105 aa8.19□□□□□ -1.1
SF3B3-205ENST00000564899 WFDC10AQ9H1F0 79 aa8.19□□□□□ -1.1
SF3B3-205ENST00000564899 LENEPQ9Y5L5 61 aa8.19□□□□□ -1.1
SF3B3-205ENST00000564899 TRBV7-9A0A0J9YWB2 115 aa8.18□□□□□ -1.1
SF3B3-205ENST00000564899 GCGP01275 180 aa8.18□□□□□ -1.1
SF3B3-205ENST00000564899 LEPP41159 167 aa8.18□□□□□ -1.1
SF3B3-205ENST00000564899 OR5I1Q13606 314 aa8.18□□□□□ -1.1
SF3B3-205ENST00000564899 SMUG1Q53HV7 270 aa8.18□□□□□ -1.1
SF3B3-205ENST00000564899 COX8CQ7Z4L0 72 aa8.18□□□□□ -1.1
SF3B3-205ENST00000564899 CLRN3Q8NCR9 226 aa8.18□□□□□ -1.1
SF3B3-205ENST00000564899 ISOC2Q96AB3 205 aa8.18□□□□□ -1.1
SF3B3-205ENST00000564899 FAM19A4Q96LR4 140 aa8.18□□□□□ -1.1
SF3B3-205ENST00000564899 BIN3Q9NQY0 253 aa8.18□□□□□ -1.1
SF3B3-205ENST00000564899 ZMAT5Q9UDW3 170 aaKnown RBP8.18□□□□□ -1.1
SF3B3-205ENST00000564899 RBMY1BA6NDE4 496 aaKnown RBP8.17□□□□□ -1.1
SF3B3-205ENST00000564899 RBMY1EA6NEQ0 496 aaKnown RBP8.17□□□□□ -1.1
SF3B3-205ENST00000564899 A8MTW9 85 aa8.17□□□□□ -1.1
SF3B3-205ENST00000564899 J3KRW8 73 aa8.17□□□□□ -1.1
SF3B3-205ENST00000564899 RBMY1DP0C7P1 496 aaKnown RBP8.17□□□□□ -1.1
SF3B3-205ENST00000564899 CRISP2P16562 243 aa8.17□□□□□ -1.1
SF3B3-205ENST00000564899 TSPOP30536 169 aa8.17□□□□□ -1.1
SF3B3-205ENST00000564899 EGFEM1PQ0D2K5 195 aa8.17□□□□□ -1.1
SF3B3-205ENST00000564899 AMTNQ6UX39 209 aa8.17□□□□□ -1.1
SF3B3-205ENST00000564899 TRPT1Q86TN4 253 aaKnown RBP8.17□□□□□ -1.1
SF3B3-205ENST00000564899 DEFB125Q8N687 156 aa8.17□□□□□ -1.1
SF3B3-205ENST00000564899 ZFAND2AQ8N6M9 145 aa8.17□□□□□ -1.1
SF3B3-205ENST00000564899 WWC2-AS2Q96NR7 200 aa8.17□□□□□ -1.1
SF3B3-205ENST00000564899 B4DEV8 164 aa8.16□□□□□ -1.1
SF3B3-205ENST00000564899 M0R2Z0 102 aa8.16□□□□□ -1.1
SF3B3-205ENST00000564899 GPX1P07203 203 aa8.16□□□□□ -1.1
SF3B3-205ENST00000564899 ERVFC1-1P60608 527 aa8.16□□□□□ -1.1
SF3B3-205ENST00000564899 RHEBQ15382 184 aa8.16□□□□□ -1.1
SF3B3-205ENST00000564899 SPINK13Q1W4C9 94 aa8.16□□□□□ -1.1
SF3B3-205ENST00000564899 PRR9Q5T870 116 aa8.16□□□□□ -1.1
SF3B3-205ENST00000564899 SORL1Q92673 2214 aa8.16□□□□□ -1.1
SF3B3-205ENST00000564899 SFRP2Q96HF1 295 aa8.16□□□□□ -1.1
SF3B3-205ENST00000564899 CLUHP3Q96NS8 147 aa8.16□□□□□ -1.1
SF3B3-205ENST00000564899 C7orf77A4D0Y5 90 aa8.15□□□□□ -1.1
SF3B3-205ENST00000564899 KLLNB2CW77 178 aa8.15□□□□□ -1.1
SF3B3-205ENST00000564899 SH2D1AO60880 128 aa8.15□□□□□ -1.1
SF3B3-205ENST00000564899 MT-ND4LP03901 98 aa8.15□□□□□ -1.1
SF3B3-205ENST00000564899 RNASE4P34096 147 aaKnown RBP8.15□□□□□ -1.1
SF3B3-205ENST00000564899 CDKN1BP46527 198 aa8.15□□□□□ -1.1
SF3B3-205ENST00000564899 CRIP1P50238 77 aa8.15□□□□□ -1.1
SF3B3-205ENST00000564899 ZNF80P51504 273 aaPredicted RBP8.15□□□□□ -1.1
SF3B3-205ENST00000564899 FXYD7P58549 80 aa8.15□□□□□ -1.1
SF3B3-205ENST00000564899 BTN1A1Q13410 526 aa8.15□□□□□ -1.1
SF3B3-205ENST00000564899 RNF212Q495C1 297 aa8.15□□□□□ -1.1
SF3B3-205ENST00000564899 DEFB121Q5J5C9 76 aa8.15□□□□□ -1.1
SF3B3-205ENST00000564899 IBA57Q5T440 356 aaKnown RBP8.15□□□□□ -1.1
SF3B3-205ENST00000564899 FAM162BQ5T6X4 162 aa8.15□□□□□ -1.1
SF3B3-205ENST00000564899 ATRAIDQ6UW56 229 aa8.15□□□□□ -1.1
SF3B3-205ENST00000564899 LINC00322Q6ZN03 302 aaPredicted RBP8.15□□□□□ -1.1
SF3B3-205ENST00000564899 FAM231DQ6ZW35 169 aa8.15□□□□□ -1.1
SF3B3-205ENST00000564899 C15orf54Q8N8G6 183 aa8.15□□□□□ -1.1
SF3B3-205ENST00000564899 OR10G8Q8NGN5 311 aa8.15□□□□□ -1.1
SF3B3-205ENST00000564899 DAZAP1Q96EP5 407 aaKnown RBP8.15□□□□□ -1.1
SF3B3-205ENST00000564899 RNASE7Q9H1E1 156 aaKnown RBP8.15□□□□□ -1.1
SF3B3-205ENST00000564899 SRD5A3Q9H8P0 318 aa8.15□□□□□ -1.1
SF3B3-205ENST00000564899 RPS10P5Q9NQ39 176 aa8.15□□□□□ -1.1
SF3B3-205ENST00000564899 TRAV12-2A0A075B6T6 113 aa8.14□□□□□ -1.11
SF3B3-205ENST00000564899 C7orf71A4D174 169 aa8.14□□□□□ -1.11
SF3B3-205ENST00000564899 C19orf71A6NCJ1 209 aa8.14□□□□□ -1.11
SF3B3-205ENST00000564899 PPP1R2P9O14990 202 aa8.14□□□□□ -1.11
SF3B3-205ENST00000564899 P01737 135 aa8.14□□□□□ -1.11
SF3B3-205ENST00000564899 PFN1P07737 140 aaKnown RBP8.14□□□□□ -1.11
SF3B3-205ENST00000564899 RPL35AP18077 110 aaKnown RBP8.14□□□□□ -1.11
SF3B3-205ENST00000564899 KIR3DS1Q14943 382 aa8.14□□□□□ -1.11
SF3B3-205ENST00000564899 GFI1BQ5VTD9 330 aa8.14□□□□□ -1.11
SF3B3-205ENST00000564899 Q8N1Y9 231 aa8.14□□□□□ -1.11
SF3B3-205ENST00000564899 NUDT10Q8NFP7 164 aa8.14□□□□□ -1.11
SF3B3-205ENST00000564899 NUDT11Q96G61 164 aa8.14□□□□□ -1.11
SF3B3-205ENST00000564899 OSTCQ9NRP0 149 aa8.14□□□□□ -1.11
SF3B3-205ENST00000564899 TRAV21A0A0B4J279 112 aa8.13□□□□□ -1.11
SF3B3-205ENST00000564899 FABP5P3A8MUU1 101 aa8.13□□□□□ -1.11
SF3B3-205ENST00000564899 ZNF705GA8MUZ8 300 aaPredicted RBP8.13□□□□□ -1.11
SF3B3-205ENST00000564899 H7BYZ3 331 aa8.13□□□□□ -1.11
SF3B3-205ENST00000564899 GATCO43716 136 aaKnown RBP8.13□□□□□ -1.11
SF3B3-205ENST00000564899 AMBPP02760 352 aa8.13□□□□□ -1.11
SF3B3-205ENST00000564899 NUTF2P61970 127 aaKnown RBP8.13□□□□□ -1.11
SF3B3-205ENST00000564899 Q6AWC8 147 aa8.13□□□□□ -1.11
SF3B3-205ENST00000564899 ANAPC16Q96DE5 110 aa8.13□□□□□ -1.11
SF3B3-205ENST00000564899 CTDSP1Q9GZU7 261 aa8.13□□□□□ -1.11
SF3B3-205ENST00000564899 RPP21Q9H633 154 aaKnown RBP8.13□□□□□ -1.11
SF3B3-205ENST00000564899 A0A087WWC5 75 aa8.12□□□□□ -1.11
SF3B3-205ENST00000564899 TRAV12-3A0A0B4J271 114 aa8.12□□□□□ -1.11
SF3B3-205ENST00000564899 INSP01308 110 aa8.12□□□□□ -1.11
SF3B3-205ENST00000564899 MORN3Q6PF18 240 aaPredicted RBP8.12□□□□□ -1.11
SF3B3-205ENST00000564899 Q6ZQT7 251 aa8.12□□□□□ -1.11
SF3B3-205ENST00000564899 OR2D3Q8NGH3 330 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms