RNA–Protein interactions for RNA: ENST00000564642.1

SYNGR3-204, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-204ENST00000564642 TMED6Q8WW62 240 aa12.91□□□□□ -0.34
SYNGR3-204ENST00000564642 ARPC5LQ9BPX5 153 aa12.91□□□□□ -0.34
SYNGR3-204ENST00000564642 IGHV1OR15-1A0A075B7D0 117 aa12.9□□□□□ -0.34
SYNGR3-204ENST00000564642 NUDT3O95989 172 aa12.9□□□□□ -0.34
SYNGR3-204ENST00000564642 RNF212Q495C1 297 aa12.9□□□□□ -0.34
SYNGR3-204ENST00000564642 GOLT1AQ6ZVE7 132 aa12.9□□□□□ -0.34
SYNGR3-204ENST00000564642 C11orf72Q8NBR9 251 aa12.9□□□□□ -0.34
SYNGR3-204ENST00000564642 OR5I1Q13606 314 aa12.89□□□□□ -0.35
SYNGR3-204ENST00000564642 IBA57Q5T440 356 aaKnown RBP12.89□□□□□ -0.35
SYNGR3-204ENST00000564642 Q6ZQT7 251 aa12.89□□□□□ -0.35
SYNGR3-204ENST00000564642 Q6ZTI0 123 aa12.89□□□□□ -0.35
SYNGR3-204ENST00000564642 ST6GAL2Q96JF0 529 aa12.89□□□□□ -0.35
SYNGR3-204ENST00000564642 TMEM167BQ9NRX6 74 aa12.89□□□□□ -0.35
SYNGR3-204ENST00000564642 TP53TG3Q9ULZ0 132 aa12.89□□□□□ -0.35
SYNGR3-204ENST00000564642 TRGV2A0A075B6R0 118 aa12.88□□□□□ -0.35
SYNGR3-204ENST00000564642 SMLR1H3BR10 107 aa12.88□□□□□ -0.35
SYNGR3-204ENST00000564642 TCL1AP56279 114 aa12.88□□□□□ -0.35
SYNGR3-204ENST00000564642 GNG5P63218 68 aa12.88□□□□□ -0.35
SYNGR3-204ENST00000564642 AKR1C8PQ5T2L2 129 aa12.88□□□□□ -0.35
SYNGR3-204ENST00000564642 IQCF2Q8IXL9 164 aa12.88□□□□□ -0.35
SYNGR3-204ENST00000564642 SUN5Q8TC36 379 aa12.88□□□□□ -0.35
SYNGR3-204ENST00000564642 ATG101Q9BSB4 218 aa12.88□□□□□ -0.35
SYNGR3-204ENST00000564642 KLF12Q9Y4X4 402 aa12.88□□□□□ -0.35
SYNGR3-204ENST00000564642 TRGV1A0A0A0MS02 117 aa12.87□□□□□ -0.35
SYNGR3-204ENST00000564642 MUC21Q5SSG8 566 aa12.87□□□□□ -0.35
SYNGR3-204ENST00000564642 Q6AWC8 147 aa12.87□□□□□ -0.35
SYNGR3-204ENST00000564642 CTXND1A0A1B0GTU2 59 aa12.86□□□□□ -0.35
SYNGR3-204ENST00000564642 SERTM2A0A1B0GWG4 89 aa12.86□□□□□ -0.35
SYNGR3-204ENST00000564642 K7EQM0 130 aa12.86□□□□□ -0.35
SYNGR3-204ENST00000564642 SUMO1P63165 101 aaKnown RBP12.86□□□□□ -0.35
SYNGR3-204ENST00000564642 ZNF415Q09FC8 603 aa12.86□□□□□ -0.35
SYNGR3-204ENST00000564642 FAM159AQ6UWV7 190 aa12.86□□□□□ -0.35
SYNGR3-204ENST00000564642 C5orf17Q8NAS9 161 aa12.86□□□□□ -0.35
SYNGR3-204ENST00000564642 KMT2AQ03164 3969 aa12.86□□□□□ -0.35
SYNGR3-204ENST00000564642 TRAV26-1A0A087WT03 109 aa12.85□□□□□ -0.35
SYNGR3-204ENST00000564642 TRAV8-1A0A0A6YYK1 113 aa12.85□□□□□ -0.35
SYNGR3-204ENST00000564642 M0R2N4 97 aa12.85□□□□□ -0.35
SYNGR3-204ENST00000564642 SPINK4O60575 86 aa12.85□□□□□ -0.35
SYNGR3-204ENST00000564642 SSX7Q7RTT5 188 aa12.85□□□□□ -0.35
SYNGR3-204ENST00000564642 NDFIP1Q9BT67 221 aa12.85□□□□□ -0.35
SYNGR3-204ENST00000564642 TMPRSS5Q9H3S3 457 aa12.85□□□□□ -0.35
SYNGR3-204ENST00000564642 TREM1Q9NP99 234 aa12.85□□□□□ -0.35
SYNGR3-204ENST00000564642 CYTL1Q9NRR1 136 aa12.85□□□□□ -0.35
SYNGR3-204ENST00000564642 A0A0J9YY99 117 aa12.84□□□□□ -0.35
SYNGR3-204ENST00000564642 TCRAP04437 139 aa12.84□□□□□ -0.35
SYNGR3-204ENST00000564642 HOXA5P20719 270 aa12.84□□□□□ -0.35
SYNGR3-204ENST00000564642 LGALS9BQ3B8N2 356 aa12.84□□□□□ -0.35
SYNGR3-204ENST00000564642 SGK494Q96LW2 274 aa12.84□□□□□ -0.35
SYNGR3-204ENST00000564642 NAGKQ9UJ70 344 aa12.84□□□□□ -0.35
SYNGR3-204ENST00000564642 IGLV2-18A0A075B6J9 118 aa12.83□□□□□ -0.36
SYNGR3-204ENST00000564642 TRAV21A0A0B4J279 112 aa12.83□□□□□ -0.36
SYNGR3-204ENST00000564642 A0A1W2PRE2 83 aa12.83□□□□□ -0.36
SYNGR3-204ENST00000564642 F6UZH7 168 aa12.83□□□□□ -0.36
SYNGR3-204ENST00000564642 CCL18P55774 89 aa12.83□□□□□ -0.36
SYNGR3-204ENST00000564642 FAM3BP58499 235 aaPredicted RBP12.83□□□□□ -0.36
SYNGR3-204ENST00000564642 ZNF345Q14585 488 aa12.83□□□□□ -0.36
SYNGR3-204ENST00000564642 ZNF726P1Q15940 193 aa12.83□□□□□ -0.36
SYNGR3-204ENST00000564642 KCNRGQ8N5I3 272 aa12.83□□□□□ -0.36
SYNGR3-204ENST00000564642 C18orf15Q96N68 181 aa12.83□□□□□ -0.36
SYNGR3-204ENST00000564642 EPDR1Q9UM22 224 aa12.83□□□□□ -0.36
SYNGR3-204ENST00000564642 VPS13DQ5THJ4 4388 aa12.83□□□□□ -0.36
SYNGR3-204ENST00000564642 NACAE9PAV3 2078 aa12.82□□□□□ -0.36
SYNGR3-204ENST00000564642 TRGV11A0A075B6L2 103 aa12.82□□□□□ -0.36
SYNGR3-204ENST00000564642 HMSDA8MTL9 139 aa12.82□□□□□ -0.36
SYNGR3-204ENST00000564642 TMEM183BQ1AE95 376 aa12.82□□□□□ -0.36
SYNGR3-204ENST00000564642 TMEM183AQ8IXX5 376 aa12.82□□□□□ -0.36
SYNGR3-204ENST00000564642 TVP23CQ96ET8 276 aa12.82□□□□□ -0.36
SYNGR3-204ENST00000564642 MRPL16Q9NX20 251 aaKnown RBP12.82□□□□□ -0.36
SYNGR3-204ENST00000564642 PSG8Q9UQ74 426 aa12.82□□□□□ -0.36
SYNGR3-204ENST00000564642 A0A0D9SG52 128 aa12.81□□□□□ -0.36
SYNGR3-204ENST00000564642 GGTLC3B5MD39 225 aa12.81□□□□□ -0.36
SYNGR3-204ENST00000564642 H3BNG1 76 aa12.81□□□□□ -0.36
SYNGR3-204ENST00000564642 FGF8P55075 233 aaPredicted RBP12.81□□□□□ -0.36
SYNGR3-204ENST00000564642 OR11H4Q8NGC9 324 aa12.81□□□□□ -0.36
SYNGR3-204ENST00000564642 MDFICQ9P1T7 246 aa12.81□□□□□ -0.36
SYNGR3-204ENST00000564642 UBE2G2P60604 165 aa12.8□□□□□ -0.36
SYNGR3-204ENST00000564642 TDRG1Q3Y452 100 aa12.8□□□□□ -0.36
SYNGR3-204ENST00000564642 CYB561D1Q8N8Q1 229 aa12.8□□□□□ -0.36
SYNGR3-204ENST00000564642 SPXQ9BT56 116 aa12.8□□□□□ -0.36
SYNGR3-204ENST00000564642 KANTRA0A1W2PQU2 76 aa12.79□□□□□ -0.36
SYNGR3-204ENST00000564642 FBLL1A6NHQ2 334 aaKnown RBP12.79□□□□□ -0.36
SYNGR3-204ENST00000564642 IFNA7P01567 189 aa12.79□□□□□ -0.36
SYNGR3-204ENST00000564642 FLI1Q01543 452 aaPredicted RBP12.79□□□□□ -0.36
SYNGR3-204ENST00000564642 ZFP69Q49AA0 526 aa12.79□□□□□ -0.36
SYNGR3-204ENST00000564642 PRNTQ86SH4 94 aa12.79□□□□□ -0.36
SYNGR3-204ENST00000564642 STOML3Q8TAV4 291 aa12.79□□□□□ -0.36
SYNGR3-204ENST00000564642 KCNS1Q96KK3 526 aa12.79□□□□□ -0.36
SYNGR3-204ENST00000564642 NKX6-2Q9C056 277 aaPredicted RBP12.79□□□□□ -0.36
SYNGR3-204ENST00000564642 MAP1LC3B2A6NCE7 125 aa12.78□□□□□ -0.36
SYNGR3-204ENST00000564642 GNRH2O43555 120 aa12.78□□□□□ -0.36
SYNGR3-204ENST00000564642 IGHV3-53P01767 116 aa12.78□□□□□ -0.36
SYNGR3-204ENST00000564642 LINC00336Q6ZUF6 198 aa12.78□□□□□ -0.36
SYNGR3-204ENST00000564642 TMEM75Q8N9X5 138 aa12.78□□□□□ -0.36
SYNGR3-204ENST00000564642 C8orf49Q96NF6 230 aa12.78□□□□□ -0.36
SYNGR3-204ENST00000564642 ZNF471Q9BX82 626 aaPredicted RBP12.78□□□□□ -0.36
SYNGR3-204ENST00000564642 MAP1LC3BQ9GZQ8 125 aa12.78□□□□□ -0.36
SYNGR3-204ENST00000564642 SDF2L1Q9HCN8 221 aa12.78□□□□□ -0.36
SYNGR3-204ENST00000564642 LINC00588Q9Y4M8 146 aa12.78□□□□□ -0.36
SYNGR3-204ENST00000564642 IGLV2-11P01706 119 aa12.77□□□□□ -0.37
SYNGR3-204ENST00000564642 SEC11BP0C7V7 166 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms