RNA–Protein interactions for RNA: ENST00000564260.1

RNF40-206, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-206ENST00000564260 FMC1Q96HJ9 113 aa12□□□□□ -0.49
RNF40-206ENST00000564260 PSG8Q9UQ74 426 aa12□□□□□ -0.49
RNF40-206ENST00000564260 KLF12Q9Y4X4 402 aa12□□□□□ -0.49
RNF40-206ENST00000564260 TRAV12-3A0A0B4J271 114 aa11.99□□□□□ -0.49
RNF40-206ENST00000564260 CXorf65A6NEN9 183 aa11.99□□□□□ -0.49
RNF40-206ENST00000564260 NUPR2A6NF83 97 aa11.99□□□□□ -0.49
RNF40-206ENST00000564260 PAGE4O60829 102 aa11.99□□□□□ -0.49
RNF40-206ENST00000564260 RNASE8Q8TDE3 154 aaKnown RBP11.99□□□□□ -0.49
RNF40-206ENST00000564260 TREM1Q9NP99 234 aa11.99□□□□□ -0.49
RNF40-206ENST00000564260 ZFP30Q9Y2G7 519 aa11.99□□□□□ -0.49
RNF40-206ENST00000564260 TRAV21A0A0B4J279 112 aa11.98□□□□□ -0.49
RNF40-206ENST00000564260 IGLV2-11P01706 119 aa11.98□□□□□ -0.49
RNF40-206ENST00000564260 RNASE4P34096 147 aaKnown RBP11.98□□□□□ -0.49
RNF40-206ENST00000564260 BTN1A1Q13410 526 aa11.98□□□□□ -0.49
RNF40-206ENST00000564260 KIR3DS1Q14943 382 aa11.98□□□□□ -0.49
RNF40-206ENST00000564260 IBA57Q5T440 356 aaKnown RBP11.98□□□□□ -0.49
RNF40-206ENST00000564260 ALKAL2Q6UX46 152 aa11.98□□□□□ -0.49
RNF40-206ENST00000564260 COX8CQ7Z4L0 72 aa11.98□□□□□ -0.49
RNF40-206ENST00000564260 EIF4E3Q8N5X7 224 aaKnown RBP11.98□□□□□ -0.49
RNF40-206ENST00000564260 LYPD6BQ8NI32 183 aa11.98□□□□□ -0.49
RNF40-206ENST00000564260 DKK2Q9UBU2 259 aa11.98□□□□□ -0.49
RNF40-206ENST00000564260 TRAV8-1A0A0A6YYK1 113 aa11.97□□□□□ -0.49
RNF40-206ENST00000564260 PRB4P10163 310 aaPredicted RBP11.97□□□□□ -0.49
RNF40-206ENST00000564260 TDRG1Q3Y452 100 aa11.97□□□□□ -0.49
RNF40-206ENST00000564260 SMUG1Q53HV7 270 aa11.97□□□□□ -0.49
RNF40-206ENST00000564260 CASC10Q5T4H9 136 aa11.97□□□□□ -0.49
RNF40-206ENST00000564260 TIMM8BQ9Y5J9 83 aaPredicted RBP11.97□□□□□ -0.49
RNF40-206ENST00000564260 IGHV1OR15-1A0A075B7D0 117 aa11.96□□□□□ -0.49
RNF40-206ENST00000564260 ZNF705GA8MUZ8 300 aaPredicted RBP11.96□□□□□ -0.49
RNF40-206ENST00000564260 RGS13O14921 159 aa11.96□□□□□ -0.49
RNF40-206ENST00000564260 PDE6DO43924 150 aa11.96□□□□□ -0.49
RNF40-206ENST00000564260 NDUFS6O75380 124 aaKnown RBP11.96□□□□□ -0.49
RNF40-206ENST00000564260 UBE2G1P62253 170 aa11.96□□□□□ -0.49
RNF40-206ENST00000564260 TMEM183BQ1AE95 376 aa11.96□□□□□ -0.49
RNF40-206ENST00000564260 GNG13Q9P2W3 67 aa11.96□□□□□ -0.49
RNF40-206ENST00000564260 TP53TG3Q9ULZ0 132 aa11.96□□□□□ -0.49
RNF40-206ENST00000564260 J3KRW8 73 aa11.95□□□□□ -0.5
RNF40-206ENST00000564260 DEFB4AO15263 64 aa11.95□□□□□ -0.5
RNF40-206ENST00000564260 ATP5G3P48201 142 aa11.95□□□□□ -0.5
RNF40-206ENST00000564260 MEF2BQ02080 365 aaPredicted RBP11.95□□□□□ -0.5
RNF40-206ENST00000564260 DAZ2Q13117 558 aaKnown RBP11.95□□□□□ -0.5
RNF40-206ENST00000564260 PRR9Q5T870 116 aa11.95□□□□□ -0.5
RNF40-206ENST00000564260 FAM159AQ6UWV7 190 aa11.95□□□□□ -0.5
RNF40-206ENST00000564260 C11orf52Q96A22 123 aa11.95□□□□□ -0.5
RNF40-206ENST00000564260 KCNS1Q96KK3 526 aa11.95□□□□□ -0.5
RNF40-206ENST00000564260 KLK5Q9Y337 293 aaPredicted RBP11.95□□□□□ -0.5
RNF40-206ENST00000564260 BOLA1Q9Y3E2 137 aa11.95□□□□□ -0.5
RNF40-206ENST00000564260 A0A1B0GV50 99 aa11.94□□□□□ -0.5
RNF40-206ENST00000564260 PLAC8L1A1L4L8 177 aa11.94□□□□□ -0.5
RNF40-206ENST00000564260 PFN1P07737 140 aaKnown RBP11.94□□□□□ -0.5
RNF40-206ENST00000564260 BCL2P10415 239 aa11.94□□□□□ -0.5
RNF40-206ENST00000564260 AKR1C3P42330 323 aa11.94□□□□□ -0.5
RNF40-206ENST00000564260 TCTAP57738 103 aa11.94□□□□□ -0.5
RNF40-206ENST00000564260 FAM222AQ5U5X8 452 aa11.94□□□□□ -0.5
RNF40-206ENST00000564260 PRNTQ86SH4 94 aa11.94□□□□□ -0.5
RNF40-206ENST00000564260 Q86TA4 180 aa11.94□□□□□ -0.5
RNF40-206ENST00000564260 C2CD4CQ8TF44 421 aa11.94□□□□□ -0.5
RNF40-206ENST00000564260 TVP23CQ96ET8 276 aa11.94□□□□□ -0.5
RNF40-206ENST00000564260 VAX2Q9UIW0 290 aa11.94□□□□□ -0.5
RNF40-206ENST00000564260 TRGV11A0A075B6L2 103 aa11.93□□□□□ -0.5
RNF40-206ENST00000564260 TRAV10A0A0B4J240 114 aa11.93□□□□□ -0.5
RNF40-206ENST00000564260 CBY3A6NI87 242 aa11.93□□□□□ -0.5
RNF40-206ENST00000564260 SNURFLB1AK76 121 aa11.93□□□□□ -0.5
RNF40-206ENST00000564260 LTAP01374 205 aa11.93□□□□□ -0.5
RNF40-206ENST00000564260 HTN1P15515 57 aa11.93□□□□□ -0.5
RNF40-206ENST00000564260 AZU1P20160 251 aa11.93□□□□□ -0.5
RNF40-206ENST00000564260 CCL20P78556 96 aa11.93□□□□□ -0.5
RNF40-206ENST00000564260 CEMP1Q6PRD7 247 aaPredicted RBP11.93□□□□□ -0.5
RNF40-206ENST00000564260 TEX261Q6UWH6 196 aa11.93□□□□□ -0.5
RNF40-206ENST00000564260 PHLDA1Q8WV24 401 aaPredicted RBP11.93□□□□□ -0.5
RNF40-206ENST00000564260 SMIM12Q96EX1 92 aa11.93□□□□□ -0.5
RNF40-206ENST00000564260 EMP1P54849 157 aa11.92□□□□□ -0.5
RNF40-206ENST00000564260 TCL1AP56279 114 aa11.92□□□□□ -0.5
RNF40-206ENST00000564260 NANOS2P60321 138 aaKnown RBP11.92□□□□□ -0.5
RNF40-206ENST00000564260 C12orf74Q32Q52 190 aa11.92□□□□□ -0.5
RNF40-206ENST00000564260 FAM210BQ96KR6 192 aa11.92□□□□□ -0.5
RNF40-206ENST00000564260 LINC00479Q96M42 142 aa11.92□□□□□ -0.5
RNF40-206ENST00000564260 CELA1Q9UNI1 258 aa11.92□□□□□ -0.5
RNF40-206ENST00000564260 GCGP01275 180 aa11.91□□□□□ -0.5
RNF40-206ENST00000564260 DAD1P61803 113 aa11.91□□□□□ -0.5
RNF40-206ENST00000564260 ZNF415Q09FC8 603 aa11.91□□□□□ -0.5
RNF40-206ENST00000564260 LGALS9BQ3B8N2 356 aa11.91□□□□□ -0.5
RNF40-206ENST00000564260 TMEM183AQ8IXX5 376 aa11.91□□□□□ -0.5
RNF40-206ENST00000564260 LINC00612Q8N6U2 182 aa11.91□□□□□ -0.5
RNF40-206ENST00000564260 C11orf72Q8NBR9 251 aa11.91□□□□□ -0.5
RNF40-206ENST00000564260 C18orf15Q96N68 181 aa11.91□□□□□ -0.5
RNF40-206ENST00000564260 CSMD3Q7Z407 3707 aa11.9□□□□□ -0.5
RNF40-206ENST00000564260 TRAV34A0A0B4J273 112 aa11.9□□□□□ -0.5
RNF40-206ENST00000564260 SCO2A0A1W2PP80 73 aa11.9□□□□□ -0.5
RNF40-206ENST00000564260 FABP5P3A8MUU1 101 aa11.9□□□□□ -0.5
RNF40-206ENST00000564260 Q6ZTC4 211 aa11.9□□□□□ -0.5
RNF40-206ENST00000564260 SGK494Q96LW2 274 aa11.9□□□□□ -0.5
RNF40-206ENST00000564260 SPXQ9BT56 116 aa11.9□□□□□ -0.5
RNF40-206ENST00000564260 SDF2L1Q9HCN8 221 aa11.9□□□□□ -0.5
RNF40-206ENST00000564260 NDUFAF3Q9BU61 184 aa11.89□□□□□ -0.51
RNF40-206ENST00000564260 TMEM250H0YL14 139 aa11.88□□□□□ -0.51
RNF40-206ENST00000564260 FAM162BQ5T6X4 162 aa11.88□□□□□ -0.51
RNF40-206ENST00000564260 ZFAND6Q6FIF0 208 aa11.88□□□□□ -0.51
RNF40-206ENST00000564260 C8orf49Q96NF6 230 aa11.88□□□□□ -0.51
RNF40-206ENST00000564260 MLST8Q9BVC4 326 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 113.9 ms