RNA–Protein interactions for RNA: ENST00000562747.1

CDT1-202, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 2

Gene CDT1, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-202ENST00000562747 A0A1W2PRE2 83 aa11.75□□□□□ -0.53
CDT1-202ENST00000562747 PRR9Q5T870 116 aa11.75□□□□□ -0.53
CDT1-202ENST00000562747 TMUB2Q71RG4 321 aa11.75□□□□□ -0.53
CDT1-202ENST00000562747 IQCF2Q8IXL9 164 aa11.75□□□□□ -0.53
CDT1-202ENST00000562747 PLA2G2EQ9NZK7 142 aa11.75□□□□□ -0.53
CDT1-202ENST00000562747 APLNQ9ULZ1 77 aa11.75□□□□□ -0.53
CDT1-202ENST00000562747 UMAD1C9J7I0 102 aa11.74□□□□□ -0.53
CDT1-202ENST00000562747 PFDN1O60925 122 aa11.74□□□□□ -0.53
CDT1-202ENST00000562747 GNG5P63218 68 aa11.74□□□□□ -0.53
CDT1-202ENST00000562747 ANXA2RQ3ZCQ2 193 aa11.74□□□□□ -0.53
CDT1-202ENST00000562747 EIF4E3Q8N5X7 224 aaKnown RBP11.74□□□□□ -0.53
CDT1-202ENST00000562747 MAP1LC3B2A6NCE7 125 aa11.73□□□□□ -0.53
CDT1-202ENST00000562747 SNURFLB1AK76 121 aa11.73□□□□□ -0.53
CDT1-202ENST00000562747 GGTLC3B5MD39 225 aa11.73□□□□□ -0.53
CDT1-202ENST00000562747 K7EQM0 130 aa11.73□□□□□ -0.53
CDT1-202ENST00000562747 C1QBP02746 253 aa11.73□□□□□ -0.53
CDT1-202ENST00000562747 TCRAP04437 139 aa11.73□□□□□ -0.53
CDT1-202ENST00000562747 TPT1P13693 172 aaKnown RBP11.73□□□□□ -0.53
CDT1-202ENST00000562747 SUMO1P63165 101 aaKnown RBP11.73□□□□□ -0.53
CDT1-202ENST00000562747 ZNF680Q8NEM1 530 aa11.73□□□□□ -0.53
CDT1-202ENST00000562747 FAM210BQ96KR6 192 aa11.73□□□□□ -0.53
CDT1-202ENST00000562747 MAP1LC3BQ9GZQ8 125 aa11.73□□□□□ -0.53
CDT1-202ENST00000562747 NOP10Q9NPE3 64 aaKnown RBP11.73□□□□□ -0.53
CDT1-202ENST00000562747 DNAH2Q9P225 4427 aa11.73□□□□□ -0.53
CDT1-202ENST00000562747 RYR1P21817 5038 aa11.72□□□□□ -0.53
CDT1-202ENST00000562747 RGS13O14921 159 aa11.72□□□□□ -0.53
CDT1-202ENST00000562747 DEFB130BP0DP73 79 aa11.72□□□□□ -0.53
CDT1-202ENST00000562747 DEFB130AP0DP74 79 aa11.72□□□□□ -0.53
CDT1-202ENST00000562747 FGF8P55075 233 aaPredicted RBP11.72□□□□□ -0.53
CDT1-202ENST00000562747 Q6AWC8 147 aa11.72□□□□□ -0.53
CDT1-202ENST00000562747 STOML3Q8TAV4 291 aa11.72□□□□□ -0.53
CDT1-202ENST00000562747 NDUFAF3Q9BU61 184 aa11.72□□□□□ -0.53
CDT1-202ENST00000562747 NKX6-2Q9C056 277 aaPredicted RBP11.72□□□□□ -0.53
CDT1-202ENST00000562747 TMPRSS5Q9H3S3 457 aa11.72□□□□□ -0.53
CDT1-202ENST00000562747 EPDR1Q9UM22 224 aa11.72□□□□□ -0.53
CDT1-202ENST00000562747 IGHV1OR15-1A0A075B7D0 117 aa11.71□□□□□ -0.53
CDT1-202ENST00000562747 TRAV8-1A0A0A6YYK1 113 aa11.71□□□□□ -0.53
CDT1-202ENST00000562747 CBY3A6NI87 242 aa11.71□□□□□ -0.53
CDT1-202ENST00000562747 HTN3P15516 51 aa11.71□□□□□ -0.53
CDT1-202ENST00000562747 DAZ2Q13117 558 aaKnown RBP11.71□□□□□ -0.53
CDT1-202ENST00000562747 LGALSLQ3ZCW2 172 aaPredicted RBP11.71□□□□□ -0.53
CDT1-202ENST00000562747 DPPA3Q6W0C5 159 aa11.71□□□□□ -0.53
CDT1-202ENST00000562747 AKAP14Q86UN6 197 aa11.71□□□□□ -0.53
CDT1-202ENST00000562747 LINC00612Q8N6U2 182 aa11.71□□□□□ -0.53
CDT1-202ENST00000562747 PKHD1P08F94 4074 aa11.71□□□□□ -0.54
CDT1-202ENST00000562747 DNAH17Q9UFH2 4485 aa11.7□□□□□ -0.54
CDT1-202ENST00000562747 hCG_2014768A0A024R1R8 64 aa11.7□□□□□ -0.54
CDT1-202ENST00000562747 FBLL1A6NHQ2 334 aaKnown RBP11.7□□□□□ -0.54
CDT1-202ENST00000562747 FHITP49789 147 aa11.7□□□□□ -0.54
CDT1-202ENST00000562747 IBA57Q5T440 356 aaKnown RBP11.7□□□□□ -0.54
CDT1-202ENST00000562747 CYB561D1Q8N8Q1 229 aa11.7□□□□□ -0.54
CDT1-202ENST00000562747 C11orf72Q8NBR9 251 aa11.7□□□□□ -0.54
CDT1-202ENST00000562747 ATG101Q9BSB4 218 aa11.7□□□□□ -0.54
CDT1-202ENST00000562747 NDFIP1Q9BT67 221 aa11.7□□□□□ -0.54
CDT1-202ENST00000562747 TREM1Q9NP99 234 aa11.7□□□□□ -0.54
CDT1-202ENST00000562747 FAM74A7A6NL05 159 aa11.69□□□□□ -0.54
CDT1-202ENST00000562747 ATP5G1P05496 136 aa11.69□□□□□ -0.54
CDT1-202ENST00000562747 ATP5G3P48201 142 aa11.69□□□□□ -0.54
CDT1-202ENST00000562747 UBE2G2P60604 165 aa11.69□□□□□ -0.54
CDT1-202ENST00000562747 Q6ZQT7 251 aa11.69□□□□□ -0.54
CDT1-202ENST00000562747 TMEM75Q8N9X5 138 aa11.69□□□□□ -0.54
CDT1-202ENST00000562747 FAM213BQ8TBF2 198 aa11.69□□□□□ -0.54
CDT1-202ENST00000562747 MBD3L1Q8WWY6 194 aa11.69□□□□□ -0.54
CDT1-202ENST00000562747 TVP23CQ96ET8 276 aa11.69□□□□□ -0.54
CDT1-202ENST00000562747 TCL1AP56279 114 aa11.68□□□□□ -0.54
CDT1-202ENST00000562747 FLI1Q01543 452 aaPredicted RBP11.68□□□□□ -0.54
CDT1-202ENST00000562747 EIF5AL1Q6IS14 154 aaKnown RBP11.68□□□□□ -0.54
CDT1-202ENST00000562747 SGK494Q96LW2 274 aa11.68□□□□□ -0.54
CDT1-202ENST00000562747 GSN-AS1Q9NRJ2 163 aa11.68□□□□□ -0.54
CDT1-202ENST00000562747 PSG8Q9UQ74 426 aa11.68□□□□□ -0.54
CDT1-202ENST00000562747 ARL2-SNX15V9GYD0 113 aa11.68□□□□□ -0.54
CDT1-202ENST00000562747 TRAV21A0A0B4J279 112 aa11.67□□□□□ -0.54
CDT1-202ENST00000562747 IFNA7P01567 189 aa11.67□□□□□ -0.54
CDT1-202ENST00000562747 IGLV2-11P01706 119 aa11.67□□□□□ -0.54
CDT1-202ENST00000562747 FAM159AQ6UWV7 190 aa11.67□□□□□ -0.54
CDT1-202ENST00000562747 SFT2D1Q8WV19 159 aa11.67□□□□□ -0.54
CDT1-202ENST00000562747 HIST1H2BAQ96A08 127 aa11.67□□□□□ -0.54
CDT1-202ENST00000562747 TP53TG3Q9ULZ0 132 aa11.67□□□□□ -0.54
CDT1-202ENST00000562747 A0A1B0GVY2 172 aa11.66□□□□□ -0.54
CDT1-202ENST00000562747 GAGE12BA1L429 117 aa11.66□□□□□ -0.54
CDT1-202ENST00000562747 F6UZH7 168 aa11.66□□□□□ -0.54
CDT1-202ENST00000562747 GAGE7O76087 117 aa11.66□□□□□ -0.54
CDT1-202ENST00000562747 GAGE12FP0CL80 117 aa11.66□□□□□ -0.54
CDT1-202ENST00000562747 GAGE12GP0CL81 117 aa11.66□□□□□ -0.54
CDT1-202ENST00000562747 GAGE12IP0CL82 117 aa11.66□□□□□ -0.54
CDT1-202ENST00000562747 PPT1P50897 306 aa11.66□□□□□ -0.54
CDT1-202ENST00000562747 RAB5CP51148 216 aa11.66□□□□□ -0.54
CDT1-202ENST00000562747 ZNF415Q09FC8 603 aa11.66□□□□□ -0.54
CDT1-202ENST00000562747 TDRG1Q3Y452 100 aa11.66□□□□□ -0.54
CDT1-202ENST00000562747 MUC21Q5SSG8 566 aa11.66□□□□□ -0.54
CDT1-202ENST00000562747 TMEM88Q6PEY1 159 aa11.66□□□□□ -0.54
CDT1-202ENST00000562747 TCEAL7Q9BRU2 100 aa11.66□□□□□ -0.54
CDT1-202ENST00000562747 ABCA13Q86UQ4 5058 aa11.65□□□□□ -0.54
CDT1-202ENST00000562747 DYNC1H1Q14204 4646 aaKnown RBP11.65□□□□□ -0.54
CDT1-202ENST00000562747 TRGV11A0A075B6L2 103 aa11.65□□□□□ -0.54
CDT1-202ENST00000562747 F5H768 121 aa11.65□□□□□ -0.54
CDT1-202ENST00000562747 PEX7O00628 323 aa11.65□□□□□ -0.54
CDT1-202ENST00000562747 SPINK4O60575 86 aa11.65□□□□□ -0.54
CDT1-202ENST00000562747 H2AFB1P0C5Y9 115 aa11.65□□□□□ -0.54
CDT1-202ENST00000562747 ZFP69Q49AA0 526 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms