RNA–Protein interactions for RNA: ENST00000556768.5

SCFD1-222, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-222ENST00000556768 MIR17HGQ75NE6 70 aa5.18□□□□□ -1.58
SCFD1-222ENST00000556768 LYPD1Q8N2G4 141 aa5.18□□□□□ -1.58
SCFD1-222ENST00000556768 EXOC3-AS1Q8N2X6 119 aa5.18□□□□□ -1.58
SCFD1-222ENST00000556768 ZNF680Q8NEM1 530 aa5.18□□□□□ -1.58
SCFD1-222ENST00000556768 RNASE8Q8TDE3 154 aaKnown RBP5.18□□□□□ -1.58
SCFD1-222ENST00000556768 KRTAP17-1Q9BYP8 105 aa5.18□□□□□ -1.58
SCFD1-222ENST00000556768 HSPB11Q9Y547 144 aa5.18□□□□□ -1.58
SCFD1-222ENST00000556768 TRGV2A0A075B6R0 118 aa5.17□□□□□ -1.58
SCFD1-222ENST00000556768 SCO2A0A1W2PP80 73 aa5.17□□□□□ -1.58
SCFD1-222ENST00000556768 C7orf71A4D174 169 aa5.17□□□□□ -1.58
SCFD1-222ENST00000556768 NPSP0C0P6 89 aa5.17□□□□□ -1.58
SCFD1-222ENST00000556768 OR10J4P0C629 311 aa5.17□□□□□ -1.58
SCFD1-222ENST00000556768 RNASE4P34096 147 aaKnown RBP5.17□□□□□ -1.58
SCFD1-222ENST00000556768 ZNF266Q14584 549 aa5.17□□□□□ -1.58
SCFD1-222ENST00000556768 LGALS9BQ3B8N2 356 aa5.17□□□□□ -1.58
SCFD1-222ENST00000556768 C9orf47Q6ZRZ4 202 aa5.17□□□□□ -1.58
SCFD1-222ENST00000556768 CMTM2Q8TAZ6 248 aa5.17□□□□□ -1.58
SCFD1-222ENST00000556768 RXFP4Q8TDU9 374 aa5.17□□□□□ -1.58
SCFD1-222ENST00000556768 SLC25A2Q9BXI2 301 aa5.17□□□□□ -1.58
SCFD1-222ENST00000556768 PARD6GQ9BYG4 376 aaPredicted RBP5.17□□□□□ -1.58
SCFD1-222ENST00000556768 SMIM3Q9BZL3 60 aa5.17□□□□□ -1.58
SCFD1-222ENST00000556768 IGLV2-18A0A075B6J9 118 aa5.16□□□□□ -1.58
SCFD1-222ENST00000556768 TRAV34A0A0B4J273 112 aa5.16□□□□□ -1.58
SCFD1-222ENST00000556768 GAGE7O76087 117 aa5.16□□□□□ -1.58
SCFD1-222ENST00000556768 NDUFB4O95168 129 aa5.16□□□□□ -1.58
SCFD1-222ENST00000556768 PTTG1O95997 202 aa5.16□□□□□ -1.58
SCFD1-222ENST00000556768 GAGE12FP0CL80 117 aa5.16□□□□□ -1.58
SCFD1-222ENST00000556768 GAGE12GP0CL81 117 aa5.16□□□□□ -1.58
SCFD1-222ENST00000556768 GAGE12IP0CL82 117 aa5.16□□□□□ -1.58
SCFD1-222ENST00000556768 M6PRP20645 277 aa5.16□□□□□ -1.58
SCFD1-222ENST00000556768 UBE2L3P68036 154 aaKnown RBP5.16□□□□□ -1.58
SCFD1-222ENST00000556768 DAZ2Q13117 558 aaKnown RBP5.16□□□□□ -1.58
SCFD1-222ENST00000556768 ERCC8Q13216 396 aa5.16□□□□□ -1.58
SCFD1-222ENST00000556768 ACOT6Q3I5F7 207 aaPredicted RBP5.16□□□□□ -1.58
SCFD1-222ENST00000556768 GNPNAT1Q96EK6 184 aaPredicted RBP5.16□□□□□ -1.58
SCFD1-222ENST00000556768 AGPAT4-IT1Q9H0P7 198 aa5.16□□□□□ -1.58
SCFD1-222ENST00000556768 MED28Q9H204 178 aa5.16□□□□□ -1.58
SCFD1-222ENST00000556768 MBD2Q9UBB5 411 aa5.16□□□□□ -1.58
SCFD1-222ENST00000556768 HECTD4Q9Y4D8 3996 aa5.16□□□□□ -1.58
SCFD1-222ENST00000556768 TRBV7-9A0A0J9YWB2 115 aa5.16□□□□□ -1.58
SCFD1-222ENST00000556768 PLAC8L1A1L4L8 177 aa5.16□□□□□ -1.58
SCFD1-222ENST00000556768 ZNF138P52744 262 aa5.16□□□□□ -1.58
SCFD1-222ENST00000556768 XP32Q5T750 250 aa5.16□□□□□ -1.58
SCFD1-222ENST00000556768 EIF4E3Q8N5X7 224 aaKnown RBP5.16□□□□□ -1.58
SCFD1-222ENST00000556768 INO80EQ8NBZ0 244 aaPredicted RBP5.16□□□□□ -1.58
SCFD1-222ENST00000556768 FAM167A-AS1Q96KT0 104 aa5.16□□□□□ -1.58
SCFD1-222ENST00000556768 HYLS1Q96M11 299 aa5.16□□□□□ -1.58
SCFD1-222ENST00000556768 DNAH10Q8IVF4 4471 aa5.15□□□□□ -1.58
SCFD1-222ENST00000556768 TRAV26-1A0A087WT03 109 aa5.15□□□□□ -1.59
SCFD1-222ENST00000556768 RBAKDNA6NC62 111 aa5.15□□□□□ -1.59
SCFD1-222ENST00000556768 KLLNB2CW77 178 aa5.15□□□□□ -1.59
SCFD1-222ENST00000556768 CRISP2P16562 243 aa5.15□□□□□ -1.59
SCFD1-222ENST00000556768 ANXA2RQ3ZCQ2 193 aa5.15□□□□□ -1.59
SCFD1-222ENST00000556768 PQLC2Q6ZP29 291 aa5.15□□□□□ -1.59
SCFD1-222ENST00000556768 ASB13Q8WXK3 278 aa5.15□□□□□ -1.59
SCFD1-222ENST00000556768 FXYD5Q96DB9 178 aa5.15□□□□□ -1.59
SCFD1-222ENST00000556768 ZNF503Q96F45 646 aa5.15□□□□□ -1.59
SCFD1-222ENST00000556768 ZNF492Q9P255 531 aa5.15□□□□□ -1.59
SCFD1-222ENST00000556768 IGKV2-40A0A087WW87 121 aaPredicted RBP5.14□□□□□ -1.59
SCFD1-222ENST00000556768 A0A0A0MQY5 61 aa5.14□□□□□ -1.59
SCFD1-222ENST00000556768 TRGV1A0A0A0MS02 117 aa5.14□□□□□ -1.59
SCFD1-222ENST00000556768 ZNF324O75467 553 aaPredicted RBP5.14□□□□□ -1.59
SCFD1-222ENST00000556768 IGKV2D-40P01614 121 aaPredicted RBP5.14□□□□□ -1.59
SCFD1-222ENST00000556768 MBP02144 154 aa5.14□□□□□ -1.59
SCFD1-222ENST00000556768 CD300CQ08708 224 aa5.14□□□□□ -1.59
SCFD1-222ENST00000556768 SLAQ13239 276 aa5.14□□□□□ -1.59
SCFD1-222ENST00000556768 BTN1A1Q13410 526 aa5.14□□□□□ -1.59
SCFD1-222ENST00000556768 C1orf134Q5TEV5 83 aa5.14□□□□□ -1.59
SCFD1-222ENST00000556768 SYT8Q8NBV8 401 aa5.14□□□□□ -1.59
SCFD1-222ENST00000556768 OR10G4Q8NGN3 311 aa5.14□□□□□ -1.59
SCFD1-222ENST00000556768 OR10G9Q8NGN4 311 aa5.14□□□□□ -1.59
SCFD1-222ENST00000556768 OR10G7Q8NGN6 311 aa5.14□□□□□ -1.59
SCFD1-222ENST00000556768 VGLL1Q99990 258 aa5.14□□□□□ -1.59
SCFD1-222ENST00000556768 LINC00467Q9BRT7 94 aa5.14□□□□□ -1.59
SCFD1-222ENST00000556768 Q9H3A6 140 aa5.14□□□□□ -1.59
SCFD1-222ENST00000556768 GSN-AS1Q9NRJ2 163 aa5.14□□□□□ -1.59
SCFD1-222ENST00000556768 LENEPQ9Y5L5 61 aa5.14□□□□□ -1.59
SCFD1-222ENST00000556768 ALG5Q9Y673 324 aa5.14□□□□□ -1.59
SCFD1-222ENST00000556768 IGHV1OR15-1A0A075B7D0 117 aa5.13□□□□□ -1.59
SCFD1-222ENST00000556768 A4D1N5 150 aa5.13□□□□□ -1.59
SCFD1-222ENST00000556768 PGPA6NDG6 321 aa5.13□□□□□ -1.59
SCFD1-222ENST00000556768 H3BNG1 76 aa5.13□□□□□ -1.59
SCFD1-222ENST00000556768 K7EQM0 130 aa5.13□□□□□ -1.59
SCFD1-222ENST00000556768 IBA57Q5T440 356 aaKnown RBP5.13□□□□□ -1.59
SCFD1-222ENST00000556768 FAM159AQ6UWV7 190 aa5.13□□□□□ -1.59
SCFD1-222ENST00000556768 PHYHIPLQ96FC7 376 aa5.13□□□□□ -1.59
SCFD1-222ENST00000556768 FAM19A4Q96LR4 140 aa5.13□□□□□ -1.59
SCFD1-222ENST00000556768 OTORQ9NRC9 128 aa5.13□□□□□ -1.59
SCFD1-222ENST00000556768 DNAH2Q9P225 4427 aa5.13□□□□□ -1.59
SCFD1-222ENST00000556768 A0A0J9YY99 117 aa5.13□□□□□ -1.59
SCFD1-222ENST00000556768 SERF2P84101 59 aa5.13□□□□□ -1.59
SCFD1-222ENST00000556768 Q6ZTI0 123 aa5.13□□□□□ -1.59
SCFD1-222ENST00000556768 SSX7Q7RTT5 188 aa5.13□□□□□ -1.59
SCFD1-222ENST00000556768 ARL6IP6Q8N6S5 226 aa5.13□□□□□ -1.59
SCFD1-222ENST00000556768 TMED6Q8WW62 240 aa5.13□□□□□ -1.59
SCFD1-222ENST00000556768 BORCS7-ASMTA0A0B4J1R7 106 aa5.12□□□□□ -1.59
SCFD1-222ENST00000556768 KRTAP4-8A0A0G2JLE6 195 aa5.12□□□□□ -1.59
SCFD1-222ENST00000556768 TCL1AP56279 114 aa5.12□□□□□ -1.59
SCFD1-222ENST00000556768 ZNF415Q09FC8 603 aa5.12□□□□□ -1.59
SCFD1-222ENST00000556768 ZFAND2AQ8N6M9 145 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms