RNA–Protein interactions for RNA: ENST00000556712.5

SNX6-208, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 851 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-208ENST00000556712 ACTR3CQ9C0K3 210 aaPredicted RBP7.3□□□□□ -1.24
SNX6-208ENST00000556712 NACAE9PAV3 2078 aa7.29□□□□□ -1.24
SNX6-208ENST00000556712 IGHV1OR15-1A0A075B7D0 117 aa7.29□□□□□ -1.24
SNX6-208ENST00000556712 CTXND1A0A1B0GTU2 59 aa7.29□□□□□ -1.24
SNX6-208ENST00000556712 GGTLC3B5MD39 225 aa7.29□□□□□ -1.24
SNX6-208ENST00000556712 CXorf1O96002 111 aa7.29□□□□□ -1.24
SNX6-208ENST00000556712 NMBP08949 121 aa7.29□□□□□ -1.24
SNX6-208ENST00000556712 FGF8P55075 233 aaPredicted RBP7.29□□□□□ -1.24
SNX6-208ENST00000556712 AKR1C8PQ5T2L2 129 aa7.29□□□□□ -1.24
SNX6-208ENST00000556712 UBE2DNLQ8IWF7 75 aa7.29□□□□□ -1.24
SNX6-208ENST00000556712 LINC00612Q8N6U2 182 aa7.29□□□□□ -1.24
SNX6-208ENST00000556712 ZNF680Q8NEM1 530 aa7.29□□□□□ -1.24
SNX6-208ENST00000556712 TVP23CQ96ET8 276 aa7.29□□□□□ -1.24
SNX6-208ENST00000556712 ST6GAL2Q96JF0 529 aa7.29□□□□□ -1.24
SNX6-208ENST00000556712 FAM210BQ96KR6 192 aa7.29□□□□□ -1.24
SNX6-208ENST00000556712 LINC00467Q9BRT7 94 aa7.29□□□□□ -1.24
SNX6-208ENST00000556712 TMPRSS5Q9H3S3 457 aa7.29□□□□□ -1.24
SNX6-208ENST00000556712 KLF12Q9Y4X4 402 aa7.29□□□□□ -1.24
SNX6-208ENST00000556712 FRAS1Q86XX4 4008 aa7.29□□□□□ -1.24
SNX6-208ENST00000556712 DNAH10Q8IVF4 4471 aa7.29□□□□□ -1.24
SNX6-208ENST00000556712 TRBV7-9A0A0J9YWB2 115 aa7.28□□□□□ -1.24
SNX6-208ENST00000556712 LCE2BO14633 110 aa7.28□□□□□ -1.24
SNX6-208ENST00000556712 TAAR5O14804 337 aa7.28□□□□□ -1.24
SNX6-208ENST00000556712 NUDT3O95989 172 aa7.28□□□□□ -1.24
SNX6-208ENST00000556712 P0DMU3 169 aa7.28□□□□□ -1.24
SNX6-208ENST00000556712 FAM231AP0DMU4 169 aa7.28□□□□□ -1.24
SNX6-208ENST00000556712 FAM231CP0DMU5 169 aa7.28□□□□□ -1.24
SNX6-208ENST00000556712 HOXA5P20719 270 aa7.28□□□□□ -1.24
SNX6-208ENST00000556712 UBE2G2P60604 165 aa7.28□□□□□ -1.24
SNX6-208ENST00000556712 ZNF345Q14585 488 aa7.28□□□□□ -1.24
SNX6-208ENST00000556712 ANXA2RQ3ZCQ2 193 aa7.28□□□□□ -1.24
SNX6-208ENST00000556712 KCNRGQ8N5I3 272 aa7.28□□□□□ -1.24
SNX6-208ENST00000556712 C5orf17Q8NAS9 161 aa7.28□□□□□ -1.24
SNX6-208ENST00000556712 SUN5Q8TC36 379 aa7.28□□□□□ -1.24
SNX6-208ENST00000556712 ARPC5LQ9BPX5 153 aa7.28□□□□□ -1.24
SNX6-208ENST00000556712 MRPL16Q9NX20 251 aaKnown RBP7.28□□□□□ -1.24
SNX6-208ENST00000556712 NAGKQ9UJ70 344 aa7.28□□□□□ -1.24
SNX6-208ENST00000556712 TRGV1A0A0A0MS02 117 aa7.27□□□□□ -1.25
SNX6-208ENST00000556712 A0A0J9YY99 117 aa7.27□□□□□ -1.25
SNX6-208ENST00000556712 TCRAP04437 139 aa7.27□□□□□ -1.25
SNX6-208ENST00000556712 FHITP49789 147 aa7.27□□□□□ -1.25
SNX6-208ENST00000556712 TCL1AP56279 114 aa7.27□□□□□ -1.25
SNX6-208ENST00000556712 DAZ2Q13117 558 aaKnown RBP7.27□□□□□ -1.25
SNX6-208ENST00000556712 OR5I1Q13606 314 aa7.27□□□□□ -1.25
SNX6-208ENST00000556712 Q6AWC8 147 aa7.27□□□□□ -1.25
SNX6-208ENST00000556712 POM121L12Q8N7R1 296 aa7.27□□□□□ -1.25
SNX6-208ENST00000556712 TMED6Q8WW62 240 aa7.27□□□□□ -1.25
SNX6-208ENST00000556712 C8orf49Q96NF6 230 aa7.27□□□□□ -1.25
SNX6-208ENST00000556712 TMEM167BQ9NRX6 74 aa7.27□□□□□ -1.25
SNX6-208ENST00000556712 LENEPQ9Y5L5 61 aa7.27□□□□□ -1.25
SNX6-208ENST00000556712 IGLV2-18A0A075B6J9 118 aa7.26□□□□□ -1.25
SNX6-208ENST00000556712 MAP1LC3B2A6NCE7 125 aa7.26□□□□□ -1.25
SNX6-208ENST00000556712 HMSDA8MTL9 139 aa7.26□□□□□ -1.25
SNX6-208ENST00000556712 M0R2N4 97 aa7.26□□□□□ -1.25
SNX6-208ENST00000556712 BCL2L11O43521 198 aa7.26□□□□□ -1.25
SNX6-208ENST00000556712 SPINK4O60575 86 aa7.26□□□□□ -1.25
SNX6-208ENST00000556712 SUMO1P63165 101 aaKnown RBP7.26□□□□□ -1.25
SNX6-208ENST00000556712 ZNF415Q09FC8 603 aa7.26□□□□□ -1.25
SNX6-208ENST00000556712 TMEM183BQ1AE95 376 aa7.26□□□□□ -1.25
SNX6-208ENST00000556712 IBA57Q5T440 356 aaKnown RBP7.26□□□□□ -1.25
SNX6-208ENST00000556712 TMEM183AQ8IXX5 376 aa7.26□□□□□ -1.25
SNX6-208ENST00000556712 C15orf53Q8NAA6 179 aa7.26□□□□□ -1.25
SNX6-208ENST00000556712 ZNF471Q9BX82 626 aaPredicted RBP7.26□□□□□ -1.25
SNX6-208ENST00000556712 MAP1LC3BQ9GZQ8 125 aa7.26□□□□□ -1.25
SNX6-208ENST00000556712 TREM1Q9NP99 234 aa7.26□□□□□ -1.25
SNX6-208ENST00000556712 MDFICQ9P1T7 246 aa7.26□□□□□ -1.25
SNX6-208ENST00000556712 TRGV2A0A075B6R0 118 aa7.25□□□□□ -1.25
SNX6-208ENST00000556712 TRAV26-1A0A087WT03 109 aa7.25□□□□□ -1.25
SNX6-208ENST00000556712 A0A1B0GV50 99 aa7.25□□□□□ -1.25
SNX6-208ENST00000556712 IGLV2-11P01706 119 aa7.25□□□□□ -1.25
SNX6-208ENST00000556712 FAM159AQ6UWV7 190 aa7.25□□□□□ -1.25
SNX6-208ENST00000556712 PRNTQ86SH4 94 aa7.25□□□□□ -1.25
SNX6-208ENST00000556712 ARL6IP6Q8N6S5 226 aa7.25□□□□□ -1.25
SNX6-208ENST00000556712 CYB561D1Q8N8Q1 229 aa7.25□□□□□ -1.25
SNX6-208ENST00000556712 LINC00479Q96M42 142 aa7.25□□□□□ -1.25
SNX6-208ENST00000556712 EPDR1Q9UM22 224 aa7.25□□□□□ -1.25
SNX6-208ENST00000556712 PSG8Q9UQ74 426 aa7.25□□□□□ -1.25
SNX6-208ENST00000556712 hCG_2014768A0A024R1R8 64 aa7.24□□□□□ -1.25
SNX6-208ENST00000556712 TRAV34A0A0B4J273 112 aa7.24□□□□□ -1.25
SNX6-208ENST00000556712 TRAV21A0A0B4J279 112 aa7.24□□□□□ -1.25
SNX6-208ENST00000556712 A0A0D9SG52 128 aa7.24□□□□□ -1.25
SNX6-208ENST00000556712 SERTM2A0A1B0GWG4 89 aa7.24□□□□□ -1.25
SNX6-208ENST00000556712 KANTRA0A1W2PQU2 76 aa7.24□□□□□ -1.25
SNX6-208ENST00000556712 A0A1W2PRE2 83 aa7.24□□□□□ -1.25
SNX6-208ENST00000556712 FAM74A7A6NL05 159 aa7.24□□□□□ -1.25
SNX6-208ENST00000556712 IGHV3-53P01767 116 aa7.24□□□□□ -1.25
SNX6-208ENST00000556712 ZNF80P51504 273 aaPredicted RBP7.24□□□□□ -1.25
SNX6-208ENST00000556712 FLI1Q01543 452 aaPredicted RBP7.24□□□□□ -1.25
SNX6-208ENST00000556712 TMEM75Q8N9X5 138 aa7.24□□□□□ -1.25
SNX6-208ENST00000556712 ATG101Q9BSB4 218 aa7.24□□□□□ -1.25
SNX6-208ENST00000556712 NDFIP1Q9BT67 221 aa7.24□□□□□ -1.25
SNX6-208ENST00000556712 TRGV11A0A075B6L2 103 aa7.23□□□□□ -1.25
SNX6-208ENST00000556712 K7EQM0 130 aa7.23□□□□□ -1.25
SNX6-208ENST00000556712 PEX7O00628 323 aa7.23□□□□□ -1.25
SNX6-208ENST00000556712 GNRH2O43555 120 aa7.23□□□□□ -1.25
SNX6-208ENST00000556712 PFDN1O60925 122 aa7.23□□□□□ -1.25
SNX6-208ENST00000556712 GCGP01275 180 aa7.23□□□□□ -1.25
SNX6-208ENST00000556712 IFNA7P01567 189 aa7.23□□□□□ -1.25
SNX6-208ENST00000556712 TYMSP04818 313 aa7.23□□□□□ -1.25
SNX6-208ENST00000556712 Q6ZNX1 250 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 218.9 ms