RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 PHLDA1Q8WV24 401 aaPredicted RBP6.89□□□□□ -1.31
SRP54-210ENST00000556380 TMED6Q8WW62 240 aa6.89□□□□□ -1.31
SRP54-210ENST00000556380 MBD3L1Q8WWY6 194 aa6.89□□□□□ -1.31
SRP54-210ENST00000556380 LINC01587Q99440 93 aa6.89□□□□□ -1.31
SRP54-210ENST00000556380 TMEM208Q9BTX3 173 aa6.89□□□□□ -1.31
SRP54-210ENST00000556380 DKK2Q9UBU2 259 aa6.89□□□□□ -1.31
SRP54-210ENST00000556380 A0A1W2PRE2 83 aa6.88□□□□□ -1.31
SRP54-210ENST00000556380 C7orf71A4D174 169 aa6.88□□□□□ -1.31
SRP54-210ENST00000556380 CXorf65A6NEN9 183 aa6.88□□□□□ -1.31
SRP54-210ENST00000556380 GGTLC3B5MD39 225 aa6.88□□□□□ -1.31
SRP54-210ENST00000556380 H7BYZ3 331 aa6.88□□□□□ -1.31
SRP54-210ENST00000556380 FGF8P55075 233 aaPredicted RBP6.88□□□□□ -1.31
SRP54-210ENST00000556380 GNG5P63218 68 aa6.88□□□□□ -1.31
SRP54-210ENST00000556380 TMEM78Q5T7P6 136 aa6.88□□□□□ -1.31
SRP54-210ENST00000556380 C9orf62Q8N4C0 152 aa6.88□□□□□ -1.31
SRP54-210ENST00000556380 Q8TAT8 98 aa6.88□□□□□ -1.31
SRP54-210ENST00000556380 CMTM2Q8TAZ6 248 aa6.88□□□□□ -1.31
SRP54-210ENST00000556380 TVP23CQ96ET8 276 aa6.88□□□□□ -1.31
SRP54-210ENST00000556380 NKX6-2Q9C056 277 aaPredicted RBP6.88□□□□□ -1.31
SRP54-210ENST00000556380 YTHDF2Q9Y5A9 579 aaKnown RBP6.88□□□□□ -1.31
SRP54-210ENST00000556380 LENEPQ9Y5L5 61 aa6.88□□□□□ -1.31
SRP54-210ENST00000556380 TRAV12-3A0A0B4J271 114 aa6.87□□□□□ -1.31
SRP54-210ENST00000556380 SERTM2A0A1B0GWG4 89 aa6.87□□□□□ -1.31
SRP54-210ENST00000556380 MAP1LC3B2A6NCE7 125 aa6.87□□□□□ -1.31
SRP54-210ENST00000556380 NUPR2A6NF83 97 aa6.87□□□□□ -1.31
SRP54-210ENST00000556380 J3KRW8 73 aa6.87□□□□□ -1.31
SRP54-210ENST00000556380 SPART-AS1P0CW21 52 aa6.87□□□□□ -1.31
SRP54-210ENST00000556380 MED14OSP0DP75 135 aa6.87□□□□□ -1.31
SRP54-210ENST00000556380 RNASE4P34096 147 aaKnown RBP6.87□□□□□ -1.31
SRP54-210ENST00000556380 RAB5CP51148 216 aa6.87□□□□□ -1.31
SRP54-210ENST00000556380 EMP1P54849 157 aa6.87□□□□□ -1.31
SRP54-210ENST00000556380 SUMO1P63165 101 aaKnown RBP6.87□□□□□ -1.31
SRP54-210ENST00000556380 BTN1A1Q13410 526 aa6.87□□□□□ -1.31
SRP54-210ENST00000556380 ZFP69Q49AA0 526 aa6.87□□□□□ -1.31
SRP54-210ENST00000556380 FAM222AQ5U5X8 452 aa6.87□□□□□ -1.31
SRP54-210ENST00000556380 Q6ZQT7 251 aa6.87□□□□□ -1.31
SRP54-210ENST00000556380 Q6ZTC4 211 aa6.87□□□□□ -1.31
SRP54-210ENST00000556380 GOLT1AQ6ZVE7 132 aa6.87□□□□□ -1.31
SRP54-210ENST00000556380 SLC51BQ86UW2 128 aa6.87□□□□□ -1.31
SRP54-210ENST00000556380 CCDC28AQ8IWP9 274 aa6.87□□□□□ -1.31
SRP54-210ENST00000556380 C5orf17Q8NAS9 161 aa6.87□□□□□ -1.31
SRP54-210ENST00000556380 RNASE8Q8TDE3 154 aaKnown RBP6.87□□□□□ -1.31
SRP54-210ENST00000556380 LINC00467Q9BRT7 94 aa6.87□□□□□ -1.31
SRP54-210ENST00000556380 MAP1LC3BQ9GZQ8 125 aa6.87□□□□□ -1.31
SRP54-210ENST00000556380 EPDR1Q9UM22 224 aa6.87□□□□□ -1.31
SRP54-210ENST00000556380 ARL2-SNX15V9GYD0 113 aa6.87□□□□□ -1.31
SRP54-210ENST00000556380 DNAH6Q9C0G6 4158 aa6.87□□□□□ -1.31
SRP54-210ENST00000556380 TRAV8-1A0A0A6YYK1 113 aa6.86□□□□□ -1.31
SRP54-210ENST00000556380 FBLL1A6NHQ2 334 aaKnown RBP6.86□□□□□ -1.31
SRP54-210ENST00000556380 FAM74A7A6NL05 159 aa6.86□□□□□ -1.31
SRP54-210ENST00000556380 IGLV2-11P01706 119 aa6.86□□□□□ -1.31
SRP54-210ENST00000556380 TCRAP04437 139 aa6.86□□□□□ -1.31
SRP54-210ENST00000556380 GPX1P07203 203 aa6.86□□□□□ -1.31
SRP54-210ENST00000556380 ZNF493Q6ZR52 646 aa6.86□□□□□ -1.31
SRP54-210ENST00000556380 ZNF767PQ75MW2 155 aa6.86□□□□□ -1.31
SRP54-210ENST00000556380 FAM213BQ8TBF2 198 aa6.86□□□□□ -1.31
SRP54-210ENST00000556380 PYGO2Q9BRQ0 406 aa6.86□□□□□ -1.31
SRP54-210ENST00000556380 TCEAL7Q9BRU2 100 aa6.86□□□□□ -1.31
SRP54-210ENST00000556380 LYRM9A8MSI8 78 aa6.85□□□□□ -1.31
SRP54-210ENST00000556380 C11orf94C9JXX5 98 aa6.85□□□□□ -1.31
SRP54-210ENST00000556380 PPT1P50897 306 aa6.85□□□□□ -1.31
SRP54-210ENST00000556380 Q6AWC8 147 aa6.85□□□□□ -1.31
SRP54-210ENST00000556380 IQCF2Q8IXL9 164 aa6.85□□□□□ -1.31
SRP54-210ENST00000556380 TMEM263Q8WUH6 116 aaKnown RBP6.85□□□□□ -1.31
SRP54-210ENST00000556380 SFT2D1Q8WV19 159 aa6.85□□□□□ -1.31
SRP54-210ENST00000556380 NIPSNAP3BQ9BS92 247 aa6.85□□□□□ -1.31
SRP54-210ENST00000556380 KMT2AQ03164 3969 aa6.85□□□□□ -1.31
SRP54-210ENST00000556380 HYDINQ4G0P3 5121 aa6.84□□□□□ -1.31
SRP54-210ENST00000556380 TRAV10A0A0B4J240 114 aa6.84□□□□□ -1.31
SRP54-210ENST00000556380 TRAV1-1A0A0B4J248 108 aa6.84□□□□□ -1.31
SRP54-210ENST00000556380 LCE6AA0A183 80 aa6.84□□□□□ -1.31
SRP54-210ENST00000556380 TEX48A0A1B0GUV7 120 aa6.84□□□□□ -1.31
SRP54-210ENST00000556380 TEX46H3BTG2 121 aa6.84□□□□□ -1.31
SRP54-210ENST00000556380 K7EQM0 130 aa6.84□□□□□ -1.31
SRP54-210ENST00000556380 HTN1P15515 57 aa6.84□□□□□ -1.31
SRP54-210ENST00000556380 SULT1A2P50226 295 aa6.84□□□□□ -1.31
SRP54-210ENST00000556380 UBE2G2P60604 165 aa6.84□□□□□ -1.31
SRP54-210ENST00000556380 ANXA2RQ3ZCQ2 193 aa6.84□□□□□ -1.31
SRP54-210ENST00000556380 LINC00612Q8N6U2 182 aa6.84□□□□□ -1.31
SRP54-210ENST00000556380 C11orf72Q8NBR9 251 aa6.84□□□□□ -1.31
SRP54-210ENST00000556380 C16orf74Q96GX8 76 aa6.84□□□□□ -1.31
SRP54-210ENST00000556380 SGK494Q96LW2 274 aa6.84□□□□□ -1.31
SRP54-210ENST00000556380 LINC00479Q96M42 142 aa6.84□□□□□ -1.31
SRP54-210ENST00000556380 KRTAP4-2Q9BYR5 136 aa6.84□□□□□ -1.31
SRP54-210ENST00000556380 RPH3ALQ9UNE2 315 aa6.84□□□□□ -1.31
SRP54-210ENST00000556380 PSG8Q9UQ74 426 aa6.84□□□□□ -1.31
SRP54-210ENST00000556380 KLK5Q9Y337 293 aaPredicted RBP6.84□□□□□ -1.31
SRP54-210ENST00000556380 TIMM8BQ9Y5J9 83 aaPredicted RBP6.84□□□□□ -1.31
SRP54-210ENST00000556380 DEFB131BA0A096LNP1 70 aa6.83□□□□□ -1.32
SRP54-210ENST00000556380 CCL20P78556 96 aa6.83□□□□□ -1.32
SRP54-210ENST00000556380 DAZ2Q13117 558 aaKnown RBP6.83□□□□□ -1.32
SRP54-210ENST00000556380 EIF4E3Q8N5X7 224 aaKnown RBP6.83□□□□□ -1.32
SRP54-210ENST00000556380 CYB561D1Q8N8Q1 229 aa6.83□□□□□ -1.32
SRP54-210ENST00000556380 TMEM75Q8N9X5 138 aa6.83□□□□□ -1.32
SRP54-210ENST00000556380 C2CD4CQ8TF44 421 aa6.83□□□□□ -1.32
SRP54-210ENST00000556380 ATG101Q9BSB4 218 aa6.83□□□□□ -1.32
SRP54-210ENST00000556380 NOP10Q9NPE3 64 aaKnown RBP6.83□□□□□ -1.32
SRP54-210ENST00000556380 TP53TG3Q9ULZ0 132 aa6.83□□□□□ -1.32
SRP54-210ENST00000556380 APLNQ9ULZ1 77 aa6.83□□□□□ -1.32
SRP54-210ENST00000556380 KLF12Q9Y4X4 402 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 99.9 ms