RNA–Protein interactions for RNA: ENST00000556342.1

SYNE2-221, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5

Gene SYNE2, Length 572 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-221ENST00000556342 FLVCR2Q9UPI3 526 aa7.21□□□□□ -1.26
SYNE2-221ENST00000556342 PRELID1Q9Y255 219 aa7.21□□□□□ -1.26
SYNE2-221ENST00000556342 IGHV1OR15-1A0A075B7D0 117 aa7.2□□□□□ -1.26
SYNE2-221ENST00000556342 E5RGE8 158 aa7.2□□□□□ -1.26
SYNE2-221ENST00000556342 H3BMQ9 156 aa7.2□□□□□ -1.26
SYNE2-221ENST00000556342 NOL3O60936 208 aaKnown RBP7.2□□□□□ -1.26
SYNE2-221ENST00000556342 NDUFB6O95139 128 aa7.2□□□□□ -1.26
SYNE2-221ENST00000556342 NDUFB4O95168 129 aa7.2□□□□□ -1.26
SYNE2-221ENST00000556342 MBPP02686 304 aaPredicted RBP7.2□□□□□ -1.26
SYNE2-221ENST00000556342 GPX1P07203 203 aa7.2□□□□□ -1.26
SYNE2-221ENST00000556342 RAB31Q13636 194 aa7.2□□□□□ -1.26
SYNE2-221ENST00000556342 PRR9Q5T870 116 aa7.2□□□□□ -1.26
SYNE2-221ENST00000556342 Q6ZQT7 251 aa7.2□□□□□ -1.26
SYNE2-221ENST00000556342 C9orf47Q6ZRZ4 202 aa7.2□□□□□ -1.26
SYNE2-221ENST00000556342 C10orf126Q8N4M7 172 aa7.2□□□□□ -1.26
SYNE2-221ENST00000556342 ARPC5LQ9BPX5 153 aa7.2□□□□□ -1.26
SYNE2-221ENST00000556342 GSKIPQ9P0R6 139 aa7.2□□□□□ -1.26
SYNE2-221ENST00000556342 TRGV4A0A0C4DH28 118 aa7.19□□□□□ -1.26
SYNE2-221ENST00000556342 LRCOL1A6NCL2 159 aa7.19□□□□□ -1.26
SYNE2-221ENST00000556342 CRYGDP07320 174 aa7.19□□□□□ -1.26
SYNE2-221ENST00000556342 SFTA3P0C7M3 94 aa7.19□□□□□ -1.26
SYNE2-221ENST00000556342 HIST1H1EP10412 219 aaKnown RBP7.19□□□□□ -1.26
SYNE2-221ENST00000556342 GYPEP15421 78 aa7.19□□□□□ -1.26
SYNE2-221ENST00000556342 ZNF415Q09FC8 603 aa7.19□□□□□ -1.26
SYNE2-221ENST00000556342 PDE6HQ13956 83 aa7.19□□□□□ -1.26
SYNE2-221ENST00000556342 IQCF2Q8IXL9 164 aa7.19□□□□□ -1.26
SYNE2-221ENST00000556342 EXOC3-AS1Q8N2X6 119 aa7.19□□□□□ -1.26
SYNE2-221ENST00000556342 C12orf45Q8N5I9 185 aaPredicted RBP7.19□□□□□ -1.26
SYNE2-221ENST00000556342 NTN5Q8WTR8 489 aaPredicted RBP7.19□□□□□ -1.26
SYNE2-221ENST00000556342 PCNPQ8WW12 178 aaKnown RBP7.19□□□□□ -1.26
SYNE2-221ENST00000556342 ZNF479Q96JC4 524 aa7.19□□□□□ -1.26
SYNE2-221ENST00000556342 RBM38Q9H0Z9 239 aaKnown RBP7.19□□□□□ -1.26
SYNE2-221ENST00000556342 SLC39A9Q9NUM3 307 aa7.19□□□□□ -1.26
SYNE2-221ENST00000556342 TMEM14CQ9P0S9 112 aa7.19□□□□□ -1.26
SYNE2-221ENST00000556342 WDR83OSQ9Y284 106 aa7.19□□□□□ -1.26
SYNE2-221ENST00000556342 TIMM9Q9Y5J7 89 aa7.19□□□□□ -1.26
SYNE2-221ENST00000556342 HMCN2Q8NDA2 5059 aa7.19□□□□□ -1.26
SYNE2-221ENST00000556342 IGKV2-40A0A087WW87 121 aaPredicted RBP7.18□□□□□ -1.26
SYNE2-221ENST00000556342 NAP1L6A6NFF2 107 aa7.18□□□□□ -1.26
SYNE2-221ENST00000556342 L7N2F9 121 aa7.18□□□□□ -1.26
SYNE2-221ENST00000556342 PSCAO43653 123 aa7.18□□□□□ -1.26
SYNE2-221ENST00000556342 IGKV2D-40P01614 121 aaPredicted RBP7.18□□□□□ -1.26
SYNE2-221ENST00000556342 ORM1P02763 201 aa7.18□□□□□ -1.26
SYNE2-221ENST00000556342 PYYP10082 97 aa7.18□□□□□ -1.26
SYNE2-221ENST00000556342 RPL29P47914 159 aaKnown RBP7.18□□□□□ -1.26
SYNE2-221ENST00000556342 VAMP2P63027 116 aa7.18□□□□□ -1.26
SYNE2-221ENST00000556342 TMEM78Q5T7P6 136 aa7.18□□□□□ -1.26
SYNE2-221ENST00000556342 TXNDC17Q9BRA2 123 aa7.18□□□□□ -1.26
SYNE2-221ENST00000556342 SRRQ9GZT4 340 aa7.18□□□□□ -1.26
SYNE2-221ENST00000556342 UQCC1Q9NVA1 299 aa7.18□□□□□ -1.26
SYNE2-221ENST00000556342 FAM30AQ9NZY2 134 aa7.18□□□□□ -1.26
SYNE2-221ENST00000556342 DNAH8Q96JB1 4490 aa7.17□□□□□ -1.26
SYNE2-221ENST00000556342 UBE2L5PA0A1B0GUS4 154 aa7.17□□□□□ -1.26
SYNE2-221ENST00000556342 CST7O76096 145 aa7.17□□□□□ -1.26
SYNE2-221ENST00000556342 BCAP31P51572 246 aa7.17□□□□□ -1.26
SYNE2-221ENST00000556342 CAV2P51636 162 aa7.17□□□□□ -1.26
SYNE2-221ENST00000556342 VWC2Q2TAL6 325 aa7.17□□□□□ -1.26
SYNE2-221ENST00000556342 OR10G4Q8NGN3 311 aa7.17□□□□□ -1.26
SYNE2-221ENST00000556342 BLNKQ8WV28 456 aa7.17□□□□□ -1.26
SYNE2-221ENST00000556342 MITD1Q8WV92 249 aa7.17□□□□□ -1.26
SYNE2-221ENST00000556342 C20orf85Q9H1P6 137 aa7.17□□□□□ -1.26
SYNE2-221ENST00000556342 AAMDCQ9H7C9 122 aa7.17□□□□□ -1.26
SYNE2-221ENST00000556342 ZNF492Q9P255 531 aa7.17□□□□□ -1.26
SYNE2-221ENST00000556342 TRBV7-9A0A0J9YWB2 115 aa7.16□□□□□ -1.26
SYNE2-221ENST00000556342 FAM24AA6NFZ4 105 aa7.16□□□□□ -1.26
SYNE2-221ENST00000556342 KRTAP29-1A8MX34 341 aaPredicted RBP7.16□□□□□ -1.26
SYNE2-221ENST00000556342 C9JCJ5 164 aa7.16□□□□□ -1.26
SYNE2-221ENST00000556342 S100A5P33763 92 aa7.16□□□□□ -1.26
SYNE2-221ENST00000556342 INPP1P49441 399 aa7.16□□□□□ -1.26
SYNE2-221ENST00000556342 BAXQ07812 192 aa7.16□□□□□ -1.26
SYNE2-221ENST00000556342 CNPY1Q3B7I2 92 aa7.16□□□□□ -1.26
SYNE2-221ENST00000556342 MUC21Q5SSG8 566 aa7.16□□□□□ -1.26
SYNE2-221ENST00000556342 FAM122CQ6P4D5 195 aa7.16□□□□□ -1.26
SYNE2-221ENST00000556342 Q8N814 137 aa7.16□□□□□ -1.26
SYNE2-221ENST00000556342 Q8TAT8 98 aa7.16□□□□□ -1.26
SYNE2-221ENST00000556342 CHAC2Q8WUX2 184 aa7.16□□□□□ -1.26
SYNE2-221ENST00000556342 RASL10AQ92737 203 aa7.16□□□□□ -1.26
SYNE2-221ENST00000556342 C11orf1Q9H5F2 150 aa7.16□□□□□ -1.26
SYNE2-221ENST00000556342 LSM5Q9Y4Y9 91 aaKnown RBP7.16□□□□□ -1.26
SYNE2-221ENST00000556342 IGHV3-38A0A0C4DH36 116 aa7.15□□□□□ -1.26
SYNE2-221ENST00000556342 CCSO14618 274 aa7.15□□□□□ -1.26
SYNE2-221ENST00000556342 C1QBP02746 253 aa7.15□□□□□ -1.26
SYNE2-221ENST00000556342 BTCP35070 178 aa7.15□□□□□ -1.26
SYNE2-221ENST00000556342 ZNF138P52744 262 aa7.15□□□□□ -1.26
SYNE2-221ENST00000556342 TIRAPP58753 221 aa7.15□□□□□ -1.26
SYNE2-221ENST00000556342 ZNF846Q147U1 533 aa7.15□□□□□ -1.26
SYNE2-221ENST00000556342 BAK1Q16611 211 aa7.15□□□□□ -1.26
SYNE2-221ENST00000556342 TRIQKQ629K1 86 aa7.15□□□□□ -1.26
SYNE2-221ENST00000556342 SPXQ9BT56 116 aa7.15□□□□□ -1.26
SYNE2-221ENST00000556342 NDUFA13Q9P0J0 144 aa7.15□□□□□ -1.26
SYNE2-221ENST00000556342 UBR4Q5T4S7 5183 aa7.14□□□□□ -1.27
SYNE2-221ENST00000556342 LOC100131303A0A0U1RQF7 123 aa7.14□□□□□ -1.27
SYNE2-221ENST00000556342 IBA57-AS1B1ANH7 110 aa7.14□□□□□ -1.27
SYNE2-221ENST00000556342 FGF7P21781 194 aa7.14□□□□□ -1.27
SYNE2-221ENST00000556342 S100A11P31949 105 aa7.14□□□□□ -1.27
SYNE2-221ENST00000556342 SULT1A1P50225 295 aa7.14□□□□□ -1.27
SYNE2-221ENST00000556342 ZNF266Q14584 549 aa7.14□□□□□ -1.27
SYNE2-221ENST00000556342 LINC01556Q5JQF7 62 aa7.14□□□□□ -1.27
SYNE2-221ENST00000556342 GCSAMLQ5JQS6 135 aa7.14□□□□□ -1.27
SYNE2-221ENST00000556342 SH2D6Q7Z4S9 175 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms