RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 TMUB2Q71RG4 321 aa8.61□□□□□ -1.03
SRP54-206ENST00000555317 SSX7Q7RTT5 188 aa8.61□□□□□ -1.03
SRP54-206ENST00000555317 ZFAND2AQ8N6M9 145 aa8.61□□□□□ -1.03
SRP54-206ENST00000555317 FAM210BQ96KR6 192 aa8.61□□□□□ -1.03
SRP54-206ENST00000555317 MAP1LC3BQ9GZQ8 125 aa8.61□□□□□ -1.03
SRP54-206ENST00000555317 SACSQ9NZJ4 4579 aa8.6□□□□□ -1.03
SRP54-206ENST00000555317 IGHV1OR15-1A0A075B7D0 117 aa8.6□□□□□ -1.03
SRP54-206ENST00000555317 A0A1W2PRE2 83 aa8.6□□□□□ -1.03
SRP54-206ENST00000555317 PLAC8L1A1L4L8 177 aa8.6□□□□□ -1.03
SRP54-206ENST00000555317 UMAD1C9J7I0 102 aa8.6□□□□□ -1.03
SRP54-206ENST00000555317 IFNA7P01567 189 aa8.6□□□□□ -1.03
SRP54-206ENST00000555317 ATP5G1P05496 136 aa8.6□□□□□ -1.03
SRP54-206ENST00000555317 SEC11BP0C7V7 166 aa8.6□□□□□ -1.03
SRP54-206ENST00000555317 TPT1P13693 172 aaKnown RBP8.6□□□□□ -1.03
SRP54-206ENST00000555317 ATP5G3P48201 142 aa8.6□□□□□ -1.03
SRP54-206ENST00000555317 UBE2G2P60604 165 aa8.6□□□□□ -1.03
SRP54-206ENST00000555317 SUMO1P63165 101 aaKnown RBP8.6□□□□□ -1.03
SRP54-206ENST00000555317 ZNF726P1Q15940 193 aa8.6□□□□□ -1.03
SRP54-206ENST00000555317 PRR9Q5T870 116 aa8.6□□□□□ -1.03
SRP54-206ENST00000555317 AKAP14Q86UN6 197 aa8.6□□□□□ -1.03
SRP54-206ENST00000555317 TCTE3Q8IZS6 198 aa8.6□□□□□ -1.03
SRP54-206ENST00000555317 SUN5Q8TC36 379 aa8.6□□□□□ -1.03
SRP54-206ENST00000555317 LINC00467Q9BRT7 94 aa8.6□□□□□ -1.03
SRP54-206ENST00000555317 APLNQ9ULZ1 77 aa8.6□□□□□ -1.03
SRP54-206ENST00000555317 TRAV8-1A0A0A6YYK1 113 aa8.59□□□□□ -1.03
SRP54-206ENST00000555317 F5H768 121 aa8.59□□□□□ -1.03
SRP54-206ENST00000555317 ZNF324O75467 553 aaPredicted RBP8.59□□□□□ -1.03
SRP54-206ENST00000555317 TCRAP04437 139 aa8.59□□□□□ -1.03
SRP54-206ENST00000555317 ANXA2RQ3ZCQ2 193 aa8.59□□□□□ -1.03
SRP54-206ENST00000555317 ZFP69Q49AA0 526 aa8.59□□□□□ -1.03
SRP54-206ENST00000555317 EIF5AL1Q6IS14 154 aaKnown RBP8.59□□□□□ -1.03
SRP54-206ENST00000555317 CYB561D1Q8N8Q1 229 aa8.59□□□□□ -1.03
SRP54-206ENST00000555317 FAM213BQ8TBF2 198 aa8.59□□□□□ -1.03
SRP54-206ENST00000555317 NKX6-2Q9C056 277 aaPredicted RBP8.59□□□□□ -1.03
SRP54-206ENST00000555317 TREM1Q9NP99 234 aa8.59□□□□□ -1.03
SRP54-206ENST00000555317 NAGKQ9UJ70 344 aa8.59□□□□□ -1.03
SRP54-206ENST00000555317 DNAH1Q9P2D7 4330 aa8.58□□□□□ -1.04
SRP54-206ENST00000555317 GAGE12BA1L429 117 aa8.58□□□□□ -1.04
SRP54-206ENST00000555317 FBLL1A6NHQ2 334 aaKnown RBP8.58□□□□□ -1.04
SRP54-206ENST00000555317 GGTLC3B5MD39 225 aa8.58□□□□□ -1.04
SRP54-206ENST00000555317 GAGE7O76087 117 aa8.58□□□□□ -1.04
SRP54-206ENST00000555317 GAGE12FP0CL80 117 aa8.58□□□□□ -1.04
SRP54-206ENST00000555317 GAGE12GP0CL81 117 aa8.58□□□□□ -1.04
SRP54-206ENST00000555317 GAGE12IP0CL82 117 aa8.58□□□□□ -1.04
SRP54-206ENST00000555317 PPT1P50897 306 aa8.58□□□□□ -1.04
SRP54-206ENST00000555317 ZNF415Q09FC8 603 aa8.58□□□□□ -1.04
SRP54-206ENST00000555317 DAZ2Q13117 558 aaKnown RBP8.58□□□□□ -1.04
SRP54-206ENST00000555317 FAM159AQ6UWV7 190 aa8.58□□□□□ -1.04
SRP54-206ENST00000555317 DPPA3Q6W0C5 159 aa8.58□□□□□ -1.04
SRP54-206ENST00000555317 ATG101Q9BSB4 218 aa8.58□□□□□ -1.04
SRP54-206ENST00000555317 TMPRSS5Q9H3S3 457 aa8.58□□□□□ -1.04
SRP54-206ENST00000555317 GSN-AS1Q9NRJ2 163 aa8.58□□□□□ -1.04
SRP54-206ENST00000555317 EPDR1Q9UM22 224 aa8.58□□□□□ -1.04
SRP54-206ENST00000555317 TRGV11A0A075B6L2 103 aa8.57□□□□□ -1.04
SRP54-206ENST00000555317 TRGV2A0A075B6R0 118 aa8.57□□□□□ -1.04
SRP54-206ENST00000555317 TRGV1A0A0A0MS02 117 aa8.57□□□□□ -1.04
SRP54-206ENST00000555317 TRAV21A0A0B4J279 112 aa8.57□□□□□ -1.04
SRP54-206ENST00000555317 F6UZH7 168 aa8.57□□□□□ -1.04
SRP54-206ENST00000555317 P0DMU3 169 aa8.57□□□□□ -1.04
SRP54-206ENST00000555317 FAM231AP0DMU4 169 aa8.57□□□□□ -1.04
SRP54-206ENST00000555317 FAM231CP0DMU5 169 aa8.57□□□□□ -1.04
SRP54-206ENST00000555317 FHITP49789 147 aa8.57□□□□□ -1.04
SRP54-206ENST00000555317 MUC21Q5SSG8 566 aa8.57□□□□□ -1.04
SRP54-206ENST00000555317 IBA57Q5T440 356 aaKnown RBP8.57□□□□□ -1.04
SRP54-206ENST00000555317 Q6AWC8 147 aa8.57□□□□□ -1.04
SRP54-206ENST00000555317 TMEM88Q6PEY1 159 aa8.57□□□□□ -1.04
SRP54-206ENST00000555317 UBE2DNLQ8IWF7 75 aa8.57□□□□□ -1.04
SRP54-206ENST00000555317 TMEM75Q8N9X5 138 aa8.57□□□□□ -1.04
SRP54-206ENST00000555317 SFT2D1Q8WV19 159 aa8.57□□□□□ -1.04
SRP54-206ENST00000555317 SGK494Q96LW2 274 aa8.57□□□□□ -1.04
SRP54-206ENST00000555317 FAM74A7A6NL05 159 aa8.56□□□□□ -1.04
SRP54-206ENST00000555317 C1QBP02746 253 aa8.56□□□□□ -1.04
SRP54-206ENST00000555317 TCL1AP56279 114 aa8.56□□□□□ -1.04
SRP54-206ENST00000555317 FLI1Q01543 452 aaPredicted RBP8.56□□□□□ -1.04
SRP54-206ENST00000555317 TMEM183BQ1AE95 376 aa8.56□□□□□ -1.04
SRP54-206ENST00000555317 CST9LP1Q5W188 147 aa8.56□□□□□ -1.04
SRP54-206ENST00000555317 PRNTQ86SH4 94 aa8.56□□□□□ -1.04
SRP54-206ENST00000555317 TMEM183AQ8IXX5 376 aa8.56□□□□□ -1.04
SRP54-206ENST00000555317 C15orf53Q8NAA6 179 aa8.56□□□□□ -1.04
SRP54-206ENST00000555317 C11orf72Q8NBR9 251 aa8.56□□□□□ -1.04
SRP54-206ENST00000555317 PSG8Q9UQ74 426 aa8.56□□□□□ -1.04
SRP54-206ENST00000555317 A0A1B0GV50 99 aa8.55□□□□□ -1.04
SRP54-206ENST00000555317 PEX7O00628 323 aa8.55□□□□□ -1.04
SRP54-206ENST00000555317 OR5I1Q13606 314 aa8.55□□□□□ -1.04
SRP54-206ENST00000555317 SAPCD1Q5SSQ6 148 aa8.55□□□□□ -1.04
SRP54-206ENST00000555317 Q6ZQT7 251 aa8.55□□□□□ -1.04
SRP54-206ENST00000555317 Q6ZTI0 123 aa8.55□□□□□ -1.04
SRP54-206ENST00000555317 HIST1H2BAQ96A08 127 aa8.55□□□□□ -1.04
SRP54-206ENST00000555317 TCEAL7Q9BRU2 100 aa8.55□□□□□ -1.04
SRP54-206ENST00000555317 SDF2L1Q9HCN8 221 aa8.55□□□□□ -1.04
SRP54-206ENST00000555317 TP53TG3Q9ULZ0 132 aa8.55□□□□□ -1.04
SRP54-206ENST00000555317 ARL2-SNX15V9GYD0 113 aa8.55□□□□□ -1.04
SRP54-206ENST00000555317 HYDINQ4G0P3 5121 aa8.54□□□□□ -1.04
SRP54-206ENST00000555317 TEX46H3BTG2 121 aa8.54□□□□□ -1.04
SRP54-206ENST00000555317 NUDT3O95989 172 aa8.54□□□□□ -1.04
SRP54-206ENST00000555317 GCGP01275 180 aa8.54□□□□□ -1.04
SRP54-206ENST00000555317 H2AFB1P0C5Y9 115 aa8.54□□□□□ -1.04
SRP54-206ENST00000555317 RAB5CP51148 216 aa8.54□□□□□ -1.04
SRP54-206ENST00000555317 UBE2G1P62253 170 aa8.54□□□□□ -1.04
SRP54-206ENST00000555317 SMUG1Q53HV7 270 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms