RNA–Protein interactions for RNA: ENST00000554973.1

FCF1-207, Transcript of FCF1, rRNA-processing protein, humanhuman

TSL 3

Gene FCF1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FCF1-207ENST00000554973 CASC2Q6XLA1 102 aa3□□□□□ -1.93
FCF1-207ENST00000554973 PLXNA4Q9HCM2 1894 aa3□□□□□ -1.93
FCF1-207ENST00000554973 FN1P02751 2386 aaKnown RBP3□□□□□ -1.93
FCF1-207ENST00000554973 ADGRB1O14514 1584 aa3□□□□□ -1.93
FCF1-207ENST00000554973 HELZP42694 1942 aaKnown RBP2.99□□□□□ -1.93
FCF1-207ENST00000554973 IGHV1-24A0A0C4DH33 117 aa2.99□□□□□ -1.93
FCF1-207ENST00000554973 IFITM5A6NNB3 132 aa2.99□□□□□ -1.93
FCF1-207ENST00000554973 CD2P06729 351 aa2.99□□□□□ -1.93
FCF1-207ENST00000554973 KRTAP26-1Q6PEX3 210 aa2.99□□□□□ -1.93
FCF1-207ENST00000554973 TCTEX1D1Q8N7M0 179 aa2.99□□□□□ -1.93
FCF1-207ENST00000554973 Q8TAT8 98 aa2.99□□□□□ -1.93
FCF1-207ENST00000554973 C4orf3Q8WVX3 66 aa2.99□□□□□ -1.93
FCF1-207ENST00000554973 CIB3Q96Q77 187 aaPredicted RBP2.99□□□□□ -1.93
FCF1-207ENST00000554973 ATG2AQ2TAZ0 1938 aa2.99□□□□□ -1.93
FCF1-207ENST00000554973 ICE1Q9Y2F5 2266 aa2.99□□□□□ -1.93
FCF1-207ENST00000554973 MRC2Q9UBG0 1479 aa2.98□□□□□ -1.93
FCF1-207ENST00000554973 CCSMST1Q4G0I0 132 aa2.98□□□□□ -1.93
FCF1-207ENST00000554973 IDO2Q6ZQW0 420 aa2.98□□□□□ -1.93
FCF1-207ENST00000554973 ZNF431Q8TF32 576 aaPredicted RBP2.98□□□□□ -1.93
FCF1-207ENST00000554973 PDCD10Q9BUL8 212 aa2.98□□□□□ -1.93
FCF1-207ENST00000554973 SNRNP25Q9BV90 132 aaKnown RBP2.98□□□□□ -1.93
FCF1-207ENST00000554973 KIF13AQ9H1H9 1805 aa2.98□□□□□ -1.93
FCF1-207ENST00000554973 SIPA1L2Q9P2F8 1722 aaPredicted RBP2.97□□□□□ -1.93
FCF1-207ENST00000554973 CORTO00230 105 aa2.97□□□□□ -1.93
FCF1-207ENST00000554973 EDF1O60869 148 aaKnown RBP2.97□□□□□ -1.93
FCF1-207ENST00000554973 LINC01545Q5VT33 79 aa2.97□□□□□ -1.93
FCF1-207ENST00000554973 Q6ZUT4 128 aa2.97□□□□□ -1.93
FCF1-207ENST00000554973 ATP6V0E2Q8NHE4 81 aa2.97□□□□□ -1.93
FCF1-207ENST00000554973 DPH3Q96FX2 82 aa2.97□□□□□ -1.93
FCF1-207ENST00000554973 SMIM7Q9BQ49 75 aa2.97□□□□□ -1.93
FCF1-207ENST00000554973 PSMG3Q9BT73 122 aaPredicted RBP2.97□□□□□ -1.93
FCF1-207ENST00000554973 PRO0461Q9UI25 63 aa2.97□□□□□ -1.93
FCF1-207ENST00000554973 FREM1Q5H8C1 2179 aa2.96□□□□□ -1.94
FCF1-207ENST00000554973 LOC100130705A0A1B0GUX0 176 aa2.96□□□□□ -1.94
FCF1-207ENST00000554973 ZNF736B4DX44 427 aaPredicted RBP2.96□□□□□ -1.94
FCF1-207ENST00000554973 HYPMO75409 117 aa2.96□□□□□ -1.94
FCF1-207ENST00000554973 BTG2P78543 158 aa2.96□□□□□ -1.94
FCF1-207ENST00000554973 MEIG1Q5JSS6 88 aa2.96□□□□□ -1.94
FCF1-207ENST00000554973 ATP11AUNQ6ZP68 121 aa2.96□□□□□ -1.94
FCF1-207ENST00000554973 FOXI2Q6ZQN5 318 aa2.96□□□□□ -1.94
FCF1-207ENST00000554973 KCNRGQ8N5I3 272 aa2.96□□□□□ -1.94
FCF1-207ENST00000554973 HEATR1Q9H583 2144 aaKnown RBP2.96□□□□□ -1.94
FCF1-207ENST00000554973 BAZ2BQ9UIF8 2168 aaKnown RBP2.95□□□□□ -1.94
FCF1-207ENST00000554973 TRAV12-2A0A075B6T6 113 aa2.95□□□□□ -1.94
FCF1-207ENST00000554973 LOC107984156A0A0G2JMH3 177 aa2.95□□□□□ -1.94
FCF1-207ENST00000554973 AKAIN1P0CW23 69 aa2.95□□□□□ -1.94
FCF1-207ENST00000554973 CNBPP62633 177 aaKnown RBP2.95□□□□□ -1.94
FCF1-207ENST00000554973 ZCCHC23Q6ZST2 131 aa2.95□□□□□ -1.94
FCF1-207ENST00000554973 FP248Q71RG6 208 aaPredicted RBP2.95□□□□□ -1.94
FCF1-207ENST00000554973 ARL17AQ8IVW1 177 aa2.95□□□□□ -1.94
FCF1-207ENST00000554973 PP6455Q8WZ26 134 aa2.95□□□□□ -1.94
FCF1-207ENST00000554973 SCN3BQ9NY72 215 aa2.95□□□□□ -1.94
FCF1-207ENST00000554973 DOCK10Q96BY6 2186 aa2.95□□□□□ -1.94
FCF1-207ENST00000554973 KIDINS220Q9ULH0 1771 aa2.95□□□□□ -1.94
FCF1-207ENST00000554973 CACNA1GO43497 2377 aa2.94□□□□□ -1.94
FCF1-207ENST00000554973 KIAA1549LQ6ZVL6 1849 aa2.94□□□□□ -1.94
FCF1-207ENST00000554973 SMIM6P0DI80 62 aa2.94□□□□□ -1.94
FCF1-207ENST00000554973 MIR22HGQ0VDD5 57 aa2.94□□□□□ -1.94
FCF1-207ENST00000554973 KRTAP13-3Q3SY46 172 aa2.94□□□□□ -1.94
FCF1-207ENST00000554973 C10orf55Q5SWW7 151 aa2.94□□□□□ -1.94
FCF1-207ENST00000554973 GKN2Q86XP6 184 aa2.94□□□□□ -1.94
FCF1-207ENST00000554973 SNX29P2Q8IUI4 249 aa2.94□□□□□ -1.94
FCF1-207ENST00000554973 COPS9Q8WXC6 57 aa2.94□□□□□ -1.94
FCF1-207ENST00000554973 C14orf144Q96I85 54 aa2.94□□□□□ -1.94
FCF1-207ENST00000554973 NOP16Q9Y3C1 178 aaKnown RBP2.94□□□□□ -1.94
FCF1-207ENST00000554973 LAMB4A4D0S4 1761 aa2.94□□□□□ -1.94
FCF1-207ENST00000554973 STRCP1A6NGW2 1772 aa2.94□□□□□ -1.94
FCF1-207ENST00000554973 PITX3O75364 302 aa2.93□□□□□ -1.94
FCF1-207ENST00000554973 OR10AG1Q8NH19 301 aa2.93□□□□□ -1.94
FCF1-207ENST00000554973 RERGLQ9H628 205 aa2.93□□□□□ -1.94
FCF1-207ENST00000554973 CEP192Q8TEP8 1941 aa2.92□□□□□ -1.94
FCF1-207ENST00000554973 CCNB3Q8WWL7 1395 aa2.92□□□□□ -1.94
FCF1-207ENST00000554973 SPAARA0A1B0GVQ0 90 aa2.92□□□□□ -1.94
FCF1-207ENST00000554973 J3QLW9 94 aa2.92□□□□□ -1.94
FCF1-207ENST00000554973 GNG4P50150 75 aa2.92□□□□□ -1.94
FCF1-207ENST00000554973 PATE1Q8WXA2 126 aa2.92□□□□□ -1.94
FCF1-207ENST00000554973 AKAP11Q9UKA4 1901 aa2.91□□□□□ -1.94
FCF1-207ENST00000554973 PCDH15Q96QU1 1955 aa2.91□□□□□ -1.94
FCF1-207ENST00000554973 TRBV6-8A0A0A6YYG3 113 aa2.91□□□□□ -1.94
FCF1-207ENST00000554973 C20orf202A1L168 122 aa2.91□□□□□ -1.94
FCF1-207ENST00000554973 RNASE3P12724 160 aaKnown RBP2.91□□□□□ -1.94
FCF1-207ENST00000554973 MIC13Q5XKP0 118 aa2.91□□□□□ -1.94
FCF1-207ENST00000554973 COA5Q86WW8 74 aa2.91□□□□□ -1.94
FCF1-207ENST00000554973 LINC00052Q96N35 136 aa2.91□□□□□ -1.94
FCF1-207ENST00000554973 ORMDL1Q9P0S3 153 aa2.91□□□□□ -1.94
FCF1-207ENST00000554973 BOKQ9UMX3 212 aaPredicted RBP2.91□□□□□ -1.94
FCF1-207ENST00000554973 CUL7Q14999 1698 aa2.91□□□□□ -1.94
FCF1-207ENST00000554973 ALPK2Q86TB3 2170 aa2.91□□□□□ -1.94
FCF1-207ENST00000554973 A2ML1A8K2U0 1454 aa2.9□□□□□ -1.94
FCF1-207ENST00000554973 NINQ8N4C6 2090 aa2.9□□□□□ -1.95
FCF1-207ENST00000554973 IGKV4-1P06312 121 aa2.9□□□□□ -1.95
FCF1-207ENST00000554973 COX7CP15954 63 aa2.9□□□□□ -1.95
FCF1-207ENST00000554973 ADCYAP1P18509 176 aa2.9□□□□□ -1.95
FCF1-207ENST00000554973 TEX261Q6UWH6 196 aa2.9□□□□□ -1.95
FCF1-207ENST00000554973 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.9□□□□□ -1.95
FCF1-207ENST00000554973 VSTM2AQ8TAG5 236 aa2.9□□□□□ -1.95
FCF1-207ENST00000554973 TAS2R8Q9NYW2 309 aa2.9□□□□□ -1.95
FCF1-207ENST00000554973 CFTRP13569 1480 aa2.9□□□□□ -1.95
FCF1-207ENST00000554973 MYOM2P54296 1465 aa2.9□□□□□ -1.95
FCF1-207ENST00000554973 CCDC179H3BU77 68 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms