RNA–Protein interactions for RNA: ENST00000554353.1

MTHFD1-206, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-206ENST00000554353 SMIM7Q9BQ49 75 aa3.91□□□□□ -1.78
MTHFD1-206ENST00000554353 GGTLC1Q9BX51 225 aa3.91□□□□□ -1.78
MTHFD1-206ENST00000554353 PARLQ9H300 379 aa3.91□□□□□ -1.78
MTHFD1-206ENST00000554353 RPUSD1Q9UJJ7 312 aaKnown RBP3.91□□□□□ -1.78
MTHFD1-206ENST00000554353 TRAV38-1A0A0B4J264 116 aa3.9□□□□□ -1.79
MTHFD1-206ENST00000554353 A0A0U1RQV1 116 aa3.9□□□□□ -1.79
MTHFD1-206ENST00000554353 FNDC10F2Z333 226 aa3.9□□□□□ -1.79
MTHFD1-206ENST00000554353 C17orf112F2Z3M2 114 aa3.9□□□□□ -1.79
MTHFD1-206ENST00000554353 HIST1H2BKO60814 126 aa3.9□□□□□ -1.79
MTHFD1-206ENST00000554353 FOXH1O75593 365 aa3.9□□□□□ -1.79
MTHFD1-206ENST00000554353 CA2P00918 260 aa3.9□□□□□ -1.79
MTHFD1-206ENST00000554353 TRGC2P03986 189 aa3.9□□□□□ -1.79
MTHFD1-206ENST00000554353 HIST1H2BJP06899 126 aa3.9□□□□□ -1.79
MTHFD1-206ENST00000554353 SNRPCP09234 159 aaKnown RBP3.9□□□□□ -1.79
MTHFD1-206ENST00000554353 OR4A8P0C604 315 aa3.9□□□□□ -1.79
MTHFD1-206ENST00000554353 LINC00869P0C866 280 aa3.9□□□□□ -1.79
MTHFD1-206ENST00000554353 SMIM6P0DI80 62 aa3.9□□□□□ -1.79
MTHFD1-206ENST00000554353 HIST1H2BOP23527 126 aa3.9□□□□□ -1.79
MTHFD1-206ENST00000554353 HIST1H2BBP33778 126 aa3.9□□□□□ -1.79
MTHFD1-206ENST00000554353 ATP5G3P48201 142 aa3.9□□□□□ -1.79
MTHFD1-206ENST00000554353 NDUFA6P56556 154 aa3.9□□□□□ -1.79
MTHFD1-206ENST00000554353 HIST1H2BDP58876 126 aa3.9□□□□□ -1.79
MTHFD1-206ENST00000554353 HIST1H2BCP62807 126 aa3.9□□□□□ -1.79
MTHFD1-206ENST00000554353 MEF2CQ06413 473 aaPredicted RBP3.9□□□□□ -1.79
MTHFD1-206ENST00000554353 HIST2H2BEQ16778 126 aa3.9□□□□□ -1.79
MTHFD1-206ENST00000554353 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.9□□□□□ -1.79
MTHFD1-206ENST00000554353 ZNF833PQ6ZTB9 187 aa3.9□□□□□ -1.79
MTHFD1-206ENST00000554353 SLC16A13Q7RTY0 426 aa3.9□□□□□ -1.79
MTHFD1-206ENST00000554353 LYG1Q8N1E2 194 aa3.9□□□□□ -1.79
MTHFD1-206ENST00000554353 ZCCHC24Q8N2G6 241 aaKnown RBP3.9□□□□□ -1.79
MTHFD1-206ENST00000554353 ZNF709Q8N972 641 aa3.9□□□□□ -1.79
MTHFD1-206ENST00000554353 Q8NBF4 154 aa3.9□□□□□ -1.79
MTHFD1-206ENST00000554353 OR4P4Q8NGL7 312 aa3.9□□□□□ -1.79
MTHFD1-206ENST00000554353 OR4X1Q8NH49 305 aa3.9□□□□□ -1.79
MTHFD1-206ENST00000554353 BLNKQ8WV28 456 aa3.9□□□□□ -1.79
MTHFD1-206ENST00000554353 FRZBQ92765 325 aa3.9□□□□□ -1.79
MTHFD1-206ENST00000554353 HIST1H2BHQ93079 126 aa3.9□□□□□ -1.79
MTHFD1-206ENST00000554353 RPUSD4Q96CM3 377 aaKnown RBP3.9□□□□□ -1.79
MTHFD1-206ENST00000554353 C9orf85Q96MD7 179 aa3.9□□□□□ -1.79
MTHFD1-206ENST00000554353 HIST1H2BNQ99877 126 aa3.9□□□□□ -1.79
MTHFD1-206ENST00000554353 HIST1H2BMQ99879 126 aa3.9□□□□□ -1.79
MTHFD1-206ENST00000554353 KRTAP4-4Q9BYR3 166 aa3.9□□□□□ -1.79
MTHFD1-206ENST00000554353 SLC25A39Q9BZJ4 359 aaPredicted RBP3.9□□□□□ -1.79
MTHFD1-206ENST00000554353 ZNRD1Q9P1U0 126 aa3.9□□□□□ -1.79
MTHFD1-206ENST00000554353 ZNF257Q9Y2Q1 563 aa3.9□□□□□ -1.79
MTHFD1-206ENST00000554353 LINC00312Q9Y6C7 94 aa3.9□□□□□ -1.79
MTHFD1-206ENST00000554353 PXMP4Q9Y6I8 212 aa3.9□□□□□ -1.79
MTHFD1-206ENST00000554353 A0A0G2JLM5 398 aa3.89□□□□□ -1.79
MTHFD1-206ENST00000554353 TEX50A0A1B0GTY4 177 aa3.89□□□□□ -1.79
MTHFD1-206ENST00000554353 hADV38S2A0JD32 116 aa3.89□□□□□ -1.79
MTHFD1-206ENST00000554353 OR4C46A6NHA9 309 aa3.89□□□□□ -1.79
MTHFD1-206ENST00000554353 SHISA9B4DS77 424 aa3.89□□□□□ -1.79
MTHFD1-206ENST00000554353 C11orf94C9JXX5 98 aa3.89□□□□□ -1.79
MTHFD1-206ENST00000554353 CD5LO43866 347 aa3.89□□□□□ -1.79
MTHFD1-206ENST00000554353 MOSP00540 346 aa3.89□□□□□ -1.79
MTHFD1-206ENST00000554353 HRASP01112 189 aa3.89□□□□□ -1.79
MTHFD1-206ENST00000554353 IGKV1-16P04430 117 aa3.89□□□□□ -1.79
MTHFD1-206ENST00000554353 TRGC1P0CF51 173 aa3.89□□□□□ -1.79
MTHFD1-206ENST00000554353 RNASE2P10153 161 aaKnown RBP3.89□□□□□ -1.79
MTHFD1-206ENST00000554353 CCL3L1P16619 93 aa3.89□□□□□ -1.79
MTHFD1-206ENST00000554353 NPY1RP25929 384 aa3.89□□□□□ -1.79
MTHFD1-206ENST00000554353 TSPOP30536 169 aa3.89□□□□□ -1.79
MTHFD1-206ENST00000554353 RPL29P47914 159 aaKnown RBP3.89□□□□□ -1.79
MTHFD1-206ENST00000554353 APOC4P55056 127 aa3.89□□□□□ -1.79
MTHFD1-206ENST00000554353 RHOBP62745 196 aa3.89□□□□□ -1.79
MTHFD1-206ENST00000554353 CCL8P80075 99 aa3.89□□□□□ -1.79
MTHFD1-206ENST00000554353 PRCDQ00LT1 54 aa3.89□□□□□ -1.79
MTHFD1-206ENST00000554353 ADIRFQ15847 76 aa3.89□□□□□ -1.79
MTHFD1-206ENST00000554353 C2orf83Q53S99 150 aa3.89□□□□□ -1.79
MTHFD1-206ENST00000554353 SAMD13Q5VXD3 122 aa3.89□□□□□ -1.79
MTHFD1-206ENST00000554353 SPATA31B1PQ5VZV4 182 aa3.89□□□□□ -1.79
MTHFD1-206ENST00000554353 LYPD2Q6UXB3 125 aa3.89□□□□□ -1.79
MTHFD1-206ENST00000554353 LINC00311Q8N616 119 aa3.89□□□□□ -1.79
MTHFD1-206ENST00000554353 C11orf52Q96A22 123 aa3.89□□□□□ -1.79
MTHFD1-206ENST00000554353 VPS25Q9BRG1 176 aa3.89□□□□□ -1.79
MTHFD1-206ENST00000554353 TCEAL7Q9BRU2 100 aa3.89□□□□□ -1.79
MTHFD1-206ENST00000554353 MRPL20Q9BYC9 149 aaKnown RBP3.89□□□□□ -1.79
MTHFD1-206ENST00000554353 NPVFQ9HCQ7 196 aa3.89□□□□□ -1.79
MTHFD1-206ENST00000554353 KCNIP2Q9NS61 270 aa3.89□□□□□ -1.79
MTHFD1-206ENST00000554353 BET1LQ9NYM9 111 aa3.89□□□□□ -1.79
MTHFD1-206ENST00000554353 THYN1Q9P016 225 aa3.89□□□□□ -1.79
MTHFD1-206ENST00000554353 CTSZQ9UBR2 303 aa3.89□□□□□ -1.79
MTHFD1-206ENST00000554353 PRNDQ9UKY0 176 aa3.89□□□□□ -1.79
MTHFD1-206ENST00000554353 ZNF256Q9Y2P7 627 aaPredicted RBP3.89□□□□□ -1.79
MTHFD1-206ENST00000554353 TNCP24821 2201 aa3.89□□□□□ -1.79
MTHFD1-206ENST00000554353 TRBV20OR9-2A0A075B6H5 130 aa3.88□□□□□ -1.79
MTHFD1-206ENST00000554353 IGKV1OR2-108A0A075B7D4 117 aa3.88□□□□□ -1.79
MTHFD1-206ENST00000554353 IGHV4-30-2A0A087WSY4 118 aa3.88□□□□□ -1.79
MTHFD1-206ENST00000554353 IGHV3-38A0A0C4DH36 116 aa3.88□□□□□ -1.79
MTHFD1-206ENST00000554353 A0A0J9YWU9 116 aa3.88□□□□□ -1.79
MTHFD1-206ENST00000554353 RBMY1BA6NDE4 496 aaKnown RBP3.88□□□□□ -1.79
MTHFD1-206ENST00000554353 RBMY1EA6NEQ0 496 aaKnown RBP3.88□□□□□ -1.79
MTHFD1-206ENST00000554353 E7EQL1 145 aa3.88□□□□□ -1.79
MTHFD1-206ENST00000554353 E7EUB6 86 aa3.88□□□□□ -1.79
MTHFD1-206ENST00000554353 F6UZH7 168 aa3.88□□□□□ -1.79
MTHFD1-206ENST00000554353 INS-IGF2F8WCM5 200 aa3.88□□□□□ -1.79
MTHFD1-206ENST00000554353 H0YJW9 148 aa3.88□□□□□ -1.79
MTHFD1-206ENST00000554353 H7C1H1 209 aa3.88□□□□□ -1.79
MTHFD1-206ENST00000554353 K7EP13 123 aa3.88□□□□□ -1.79
MTHFD1-206ENST00000554353 SOCS3O14543 225 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms