RNA–Protein interactions for RNA: ENST00000554226.5

NEDD1-206, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 2

Gene NEDD1, Length 582 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-206ENST00000554226 RAB31Q13636 194 aa9.13□□□□□ -0.95
NEDD1-206ENST00000554226 TOMM5Q8N4H5 51 aa9.13□□□□□ -0.95
NEDD1-206ENST00000554226 MCFD2Q8NI22 146 aa9.13□□□□□ -0.95
NEDD1-206ENST00000554226 RAB2BQ8WUD1 216 aa9.13□□□□□ -0.95
NEDD1-206ENST00000554226 CHAC2Q8WUX2 184 aa9.13□□□□□ -0.95
NEDD1-206ENST00000554226 C7orf66A4D0T2 115 aa9.12□□□□□ -0.95
NEDD1-206ENST00000554226 TNFSF8P32971 234 aa9.12□□□□□ -0.95
NEDD1-206ENST00000554226 RPL29P47914 159 aaKnown RBP9.12□□□□□ -0.95
NEDD1-206ENST00000554226 PPT1P50897 306 aa9.12□□□□□ -0.95
NEDD1-206ENST00000554226 ZNF266Q14584 549 aa9.12□□□□□ -0.95
NEDD1-206ENST00000554226 MIC13Q5XKP0 118 aa9.12□□□□□ -0.95
NEDD1-206ENST00000554226 NRARPQ7Z6K4 114 aa9.12□□□□□ -0.95
NEDD1-206ENST00000554226 AAMDCQ9H7C9 122 aa9.12□□□□□ -0.95
NEDD1-206ENST00000554226 WDR83OSQ9Y284 106 aa9.12□□□□□ -0.95
NEDD1-206ENST00000554226 PKHD1L1Q86WI1 4243 aa9.11□□□□□ -0.95
NEDD1-206ENST00000554226 IGKV2-40A0A087WW87 121 aaPredicted RBP9.11□□□□□ -0.95
NEDD1-206ENST00000554226 LOC100131303A0A0U1RQF7 123 aa9.11□□□□□ -0.95
NEDD1-206ENST00000554226 IGKV2D-40P01614 121 aaPredicted RBP9.11□□□□□ -0.95
NEDD1-206ENST00000554226 PFN1P07737 140 aaKnown RBP9.11□□□□□ -0.95
NEDD1-206ENST00000554226 GATA1P15976 413 aaPredicted RBP9.11□□□□□ -0.95
NEDD1-206ENST00000554226 ZNF138P52744 262 aa9.11□□□□□ -0.95
NEDD1-206ENST00000554226 VWC2Q2TAL6 325 aa9.11□□□□□ -0.95
NEDD1-206ENST00000554226 Q6AWC8 147 aa9.11□□□□□ -0.95
NEDD1-206ENST00000554226 EXOC3-AS1Q8N2X6 119 aa9.11□□□□□ -0.95
NEDD1-206ENST00000554226 SLIRPQ9GZT3 109 aaKnown RBP9.11□□□□□ -0.95
NEDD1-206ENST00000554226 SLC39A9Q9NUM3 307 aa9.11□□□□□ -0.95
NEDD1-206ENST00000554226 TIMM9Q9Y5J7 89 aa9.11□□□□□ -0.95
NEDD1-206ENST00000554226 LRP2P98164 4655 aa9.1□□□□□ -0.95
NEDD1-206ENST00000554226 TRGV11A0A075B6L2 103 aa9.1□□□□□ -0.95
NEDD1-206ENST00000554226 RS1O15537 224 aa9.1□□□□□ -0.95
NEDD1-206ENST00000554226 IGLV2-8P01709 118 aa9.1□□□□□ -0.95
NEDD1-206ENST00000554226 ACOT6Q3I5F7 207 aaPredicted RBP9.1□□□□□ -0.95
NEDD1-206ENST00000554226 LELP1Q5T871 98 aa9.1□□□□□ -0.95
NEDD1-206ENST00000554226 NHLRC2Q8NBF2 726 aa9.1□□□□□ -0.95
NEDD1-206ENST00000554226 CIRBP-AS1Q8TBR5 109 aa9.1□□□□□ -0.95
NEDD1-206ENST00000554226 TRAV8-3A0A0A6YYJ7 113 aa9.09□□□□□ -0.95
NEDD1-206ENST00000554226 RBAKDNA6NC62 111 aa9.09□□□□□ -0.95
NEDD1-206ENST00000554226 PYYP10082 97 aa9.09□□□□□ -0.95
NEDD1-206ENST00000554226 IAH1Q2TAA2 248 aaPredicted RBP9.09□□□□□ -0.95
NEDD1-206ENST00000554226 OR10J3Q5JRS4 329 aa9.09□□□□□ -0.95
NEDD1-206ENST00000554226 OR4C5Q8NGB2 326 aa9.09□□□□□ -0.95
NEDD1-206ENST00000554226 BCL7BQ9BQE9 202 aa9.09□□□□□ -0.95
NEDD1-206ENST00000554226 M0R2P5 195 aa9.08□□□□□ -0.96
NEDD1-206ENST00000554226 MBPP02686 304 aaPredicted RBP9.08□□□□□ -0.96
NEDD1-206ENST00000554226 MUC21Q5SSG8 566 aa9.08□□□□□ -0.96
NEDD1-206ENST00000554226 Q8TAT8 98 aa9.08□□□□□ -0.96
NEDD1-206ENST00000554226 UQCC1Q9NVA1 299 aa9.08□□□□□ -0.96
NEDD1-206ENST00000554226 LENEPQ9Y5L5 61 aa9.08□□□□□ -0.96
NEDD1-206ENST00000554226 CIDEAO60543 219 aa9.07□□□□□ -0.96
NEDD1-206ENST00000554226 SCGB1D2O95969 90 aa9.07□□□□□ -0.96
NEDD1-206ENST00000554226 IGLV2-11P01706 119 aa9.07□□□□□ -0.96
NEDD1-206ENST00000554226 IGHV3-30P01768 117 aa9.07□□□□□ -0.96
NEDD1-206ENST00000554226 IGHV3-33P01772 117 aa9.07□□□□□ -0.96
NEDD1-206ENST00000554226 IGHV3-30-3P0DP02 117 aa9.07□□□□□ -0.96
NEDD1-206ENST00000554226 IGHV3-30-5P0DP03 117 aa9.07□□□□□ -0.96
NEDD1-206ENST00000554226 BAK1Q16611 211 aa9.07□□□□□ -0.96
NEDD1-206ENST00000554226 TMEM183BQ1AE95 376 aa9.07□□□□□ -0.96
NEDD1-206ENST00000554226 FAM122CQ6P4D5 195 aa9.07□□□□□ -0.96
NEDD1-206ENST00000554226 FAM159AQ6UWV7 190 aa9.07□□□□□ -0.96
NEDD1-206ENST00000554226 TMEM183AQ8IXX5 376 aa9.07□□□□□ -0.96
NEDD1-206ENST00000554226 C20orf85Q9H1P6 137 aa9.07□□□□□ -0.96
NEDD1-206ENST00000554226 COX11Q9Y6N1 276 aa9.07□□□□□ -0.96
NEDD1-206ENST00000554226 V9GYH0 126 aa9.07□□□□□ -0.96
NEDD1-206ENST00000554226 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.06□□□□□ -0.96
NEDD1-206ENST00000554226 TRBV6-4A0A1B0GX49 114 aa9.06□□□□□ -0.96
NEDD1-206ENST00000554226 NDUFB6O95139 128 aa9.06□□□□□ -0.96
NEDD1-206ENST00000554226 MT1HL1P0DM35 61 aa9.06□□□□□ -0.96
NEDD1-206ENST00000554226 LINC01620Q4KN68 170 aa9.06□□□□□ -0.96
NEDD1-206ENST00000554226 SLC25A29Q8N8R3 303 aa9.06□□□□□ -0.96
NEDD1-206ENST00000554226 FAM167A-AS1Q96KT0 104 aa9.06□□□□□ -0.96
NEDD1-206ENST00000554226 SLC25A2Q9BXI2 301 aa9.06□□□□□ -0.96
NEDD1-206ENST00000554226 C11orf1Q9H5F2 150 aa9.06□□□□□ -0.96
NEDD1-206ENST00000554226 IGHV3-16A0A0C4DH30 117 aa9.05□□□□□ -0.96
NEDD1-206ENST00000554226 RNF222A6NCQ9 220 aa9.05□□□□□ -0.96
NEDD1-206ENST00000554226 LECT2O14960 151 aa9.05□□□□□ -0.96
NEDD1-206ENST00000554226 NBEAP1P0C6P0 100 aa9.05□□□□□ -0.96
NEDD1-206ENST00000554226 TMBIM6P55061 237 aa9.05□□□□□ -0.96
NEDD1-206ENST00000554226 RHOHQ15669 191 aa9.05□□□□□ -0.96
NEDD1-206ENST00000554226 PYDC2Q56P42 97 aa9.05□□□□□ -0.96
NEDD1-206ENST00000554226 TOR2AQ5JU69 321 aa9.05□□□□□ -0.96
NEDD1-206ENST00000554226 Q8N976 141 aa9.05□□□□□ -0.96
NEDD1-206ENST00000554226 TMED6Q8WW62 240 aa9.05□□□□□ -0.96
NEDD1-206ENST00000554226 GTSF1LQ9H1H1 148 aa9.05□□□□□ -0.96
NEDD1-206ENST00000554226 GPN1Q9HCN4 374 aaPredicted RBP9.05□□□□□ -0.96
NEDD1-206ENST00000554226 FBLL1A6NHQ2 334 aaKnown RBP9.04□□□□□ -0.96
NEDD1-206ENST00000554226 CST7O76096 145 aa9.04□□□□□ -0.96
NEDD1-206ENST00000554226 MITD1Q8WV92 249 aa9.04□□□□□ -0.96
NEDD1-206ENST00000554226 PRADC1Q9BSG0 188 aa9.04□□□□□ -0.96
NEDD1-206ENST00000554226 SH3BGRL3Q9H299 93 aa9.04□□□□□ -0.96
NEDD1-206ENST00000554226 GSKIPQ9P0R6 139 aa9.04□□□□□ -0.96
NEDD1-206ENST00000554226 RBFOX3A6NFN3 312 aa9.03□□□□□ -0.96
NEDD1-206ENST00000554226 L7N2F9 121 aa9.03□□□□□ -0.96
NEDD1-206ENST00000554226 S100A11P31949 105 aa9.03□□□□□ -0.96
NEDD1-206ENST00000554226 HNRNPA3P51991 378 aaKnown RBP9.03□□□□□ -0.96
NEDD1-206ENST00000554226 VAMP2P63027 116 aa9.03□□□□□ -0.96
NEDD1-206ENST00000554226 ATP6V0E2Q8NHE4 81 aa9.03□□□□□ -0.96
NEDD1-206ENST00000554226 FXYD5Q96DB9 178 aa9.03□□□□□ -0.96
NEDD1-206ENST00000554226 DAZAP1Q96EP5 407 aaKnown RBP9.03□□□□□ -0.96
NEDD1-206ENST00000554226 MRPS26Q9BYN8 205 aaKnown RBP9.03□□□□□ -0.96
NEDD1-206ENST00000554226 UBE2L5PA0A1B0GUS4 154 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms