RNA–Protein interactions for RNA: ENST00000553649.2

SMARCE1P3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 pseudogene 3, humanhuman

BASIC

Gene SMARCE1P3, Length 1,231 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1P3-201ENST00000553649 C21orf62Q9NYP8 219 aa4.02□□□□□ -1.77
SMARCE1P3-201ENST00000553649 ERG28Q9UKR5 140 aa4.02□□□□□ -1.77
SMARCE1P3-201ENST00000553649 LAMTOR2Q9Y2Q5 125 aa4.02□□□□□ -1.77
SMARCE1P3-201ENST00000553649 OR2W1Q9Y3N9 320 aa4.02□□□□□ -1.77
SMARCE1P3-201ENST00000553649 CSDC2Q9Y534 153 aaKnown RBP4.02□□□□□ -1.77
SMARCE1P3-201ENST00000553649 V9GY05 133 aa4.02□□□□□ -1.77
SMARCE1P3-201ENST00000553649 AGRNO00468 2067 aa4.02□□□□□ -1.77
SMARCE1P3-201ENST00000553649 BORCS7-ASMTA0A0B4J1R7 106 aa4.01□□□□□ -1.77
SMARCE1P3-201ENST00000553649 TRAV10A0A0B4J240 114 aa4.01□□□□□ -1.77
SMARCE1P3-201ENST00000553649 IGHV3-66A0A0C4DH42 116 aa4.01□□□□□ -1.77
SMARCE1P3-201ENST00000553649 IGHV7-4-1A0A0J9YVY3 117 aa4.01□□□□□ -1.77
SMARCE1P3-201ENST00000553649 SMIM9A6NGZ8 99 aa4.01□□□□□ -1.77
SMARCE1P3-201ENST00000553649 B4DEV8 164 aa4.01□□□□□ -1.77
SMARCE1P3-201ENST00000553649 CHEK1O14757 476 aa4.01□□□□□ -1.77
SMARCE1P3-201ENST00000553649 ORM1P02763 201 aa4.01□□□□□ -1.77
SMARCE1P3-201ENST00000553649 PTHLHP12272 177 aa4.01□□□□□ -1.77
SMARCE1P3-201ENST00000553649 ATP6V0CP27449 155 aa4.01□□□□□ -1.77
SMARCE1P3-201ENST00000553649 TAS2R19P59542 299 aa4.01□□□□□ -1.77
SMARCE1P3-201ENST00000553649 DEFB131AP59861 70 aa4.01□□□□□ -1.77
SMARCE1P3-201ENST00000553649 PAFAH1B2P68402 229 aa4.01□□□□□ -1.77
SMARCE1P3-201ENST00000553649 SRPXP78539 464 aa4.01□□□□□ -1.77
SMARCE1P3-201ENST00000553649 MEF2DQ14814 521 aa4.01□□□□□ -1.77
SMARCE1P3-201ENST00000553649 BATFQ16520 125 aa4.01□□□□□ -1.77
SMARCE1P3-201ENST00000553649 LGALS9BQ3B8N2 356 aa4.01□□□□□ -1.77
SMARCE1P3-201ENST00000553649 RNASE12Q5GAN4 147 aaKnown RBP4.01□□□□□ -1.77
SMARCE1P3-201ENST00000553649 OR8I2Q8N0Y5 310 aa4.01□□□□□ -1.77
SMARCE1P3-201ENST00000553649 Q8NAQ8 132 aa4.01□□□□□ -1.77
SMARCE1P3-201ENST00000553649 OR4B1Q8NGF8 309 aa4.01□□□□□ -1.77
SMARCE1P3-201ENST00000553649 OR51H1Q8NH63 302 aa4.01□□□□□ -1.77
SMARCE1P3-201ENST00000553649 SCRT1Q9BWW7 348 aa4.01□□□□□ -1.77
SMARCE1P3-201ENST00000553649 TMEM231Q9H6L2 316 aa4.01□□□□□ -1.77
SMARCE1P3-201ENST00000553649 CCL28Q9NRJ3 127 aa4.01□□□□□ -1.77
SMARCE1P3-201ENST00000553649 SS18L2Q9UHA2 77 aa4.01□□□□□ -1.77
SMARCE1P3-201ENST00000553649 GPR132Q9UNW8 380 aa4.01□□□□□ -1.77
SMARCE1P3-201ENST00000553649 LSM2Q9Y333 95 aaKnown RBP4.01□□□□□ -1.77
SMARCE1P3-201ENST00000553649 LRP1Q07954 4544 aaKnown RBP4.01□□□□□ -1.77
SMARCE1P3-201ENST00000553649 DEFB131BA0A096LNP1 70 aa4□□□□□ -1.77
SMARCE1P3-201ENST00000553649 TRAV14DV4A0A0A6YYC5 116 aa4□□□□□ -1.77
SMARCE1P3-201ENST00000553649 A0A0B4J2A0 478 aa4□□□□□ -1.77
SMARCE1P3-201ENST00000553649 TMEM189A5PLL7 270 aa4□□□□□ -1.77
SMARCE1P3-201ENST00000553649 TMEM235A6NFC5 223 aa4□□□□□ -1.77
SMARCE1P3-201ENST00000553649 C15orf61A6NNL5 157 aa4□□□□□ -1.77
SMARCE1P3-201ENST00000553649 C15orf62A8K5M9 175 aa4□□□□□ -1.77
SMARCE1P3-201ENST00000553649 H0YIZ8 118 aa4□□□□□ -1.77
SMARCE1P3-201ENST00000553649 UPK2O00526 184 aa4□□□□□ -1.77
SMARCE1P3-201ENST00000553649 RS1O15537 224 aa4□□□□□ -1.77
SMARCE1P3-201ENST00000553649 ST8SIA3O43173 380 aa4□□□□□ -1.77
SMARCE1P3-201ENST00000553649 IGHV3-48P01763 117 aa4□□□□□ -1.77
SMARCE1P3-201ENST00000553649 EIF4EP06730 217 aaKnown RBP4□□□□□ -1.77
SMARCE1P3-201ENST00000553649 TRGC1P0CF51 173 aa4□□□□□ -1.77
SMARCE1P3-201ENST00000553649 HIST1H1EP10412 219 aaKnown RBP4□□□□□ -1.77
SMARCE1P3-201ENST00000553649 PSG1P11464 419 aa4□□□□□ -1.77
SMARCE1P3-201ENST00000553649 FCGR2CP31995 323 aa4□□□□□ -1.77
SMARCE1P3-201ENST00000553649 CMC4P56277 68 aaPredicted RBP4□□□□□ -1.77
SMARCE1P3-201ENST00000553649 FXYD4P59646 89 aa4□□□□□ -1.77
SMARCE1P3-201ENST00000553649 WT1-ASQ06250 92 aa4□□□□□ -1.77
SMARCE1P3-201ENST00000553649 HSD52Q0P140 79 aa4□□□□□ -1.77
SMARCE1P3-201ENST00000553649 EIF4EBP1Q13541 118 aaPredicted RBP4□□□□□ -1.77
SMARCE1P3-201ENST00000553649 KLK9Q2XQG4 91 aa4□□□□□ -1.77
SMARCE1P3-201ENST00000553649 AADACL3Q5VUY0 350 aa4□□□□□ -1.77
SMARCE1P3-201ENST00000553649 PVRIGQ6DKI7 326 aa4□□□□□ -1.77
SMARCE1P3-201ENST00000553649 SPSB3Q6PJ21 355 aa4□□□□□ -1.77
SMARCE1P3-201ENST00000553649 ZNF66Q6ZN08 573 aa4□□□□□ -1.77
SMARCE1P3-201ENST00000553649 TEX43Q6ZNM6 134 aa4□□□□□ -1.77
SMARCE1P3-201ENST00000553649 NEGR1Q7Z3B1 354 aa4□□□□□ -1.77
SMARCE1P3-201ENST00000553649 UBE2DNLQ8IWF7 75 aa4□□□□□ -1.77
SMARCE1P3-201ENST00000553649 STHQ8IWL8 128 aa4□□□□□ -1.77
SMARCE1P3-201ENST00000553649 TOMM5Q8N4H5 51 aa4□□□□□ -1.77
SMARCE1P3-201ENST00000553649 POM121L12Q8N7R1 296 aa4□□□□□ -1.77
SMARCE1P3-201ENST00000553649 OR13C6PQ8NH95 151 aa4□□□□□ -1.77
SMARCE1P3-201ENST00000553649 BTF3L4Q96K17 158 aa4□□□□□ -1.77
SMARCE1P3-201ENST00000553649 VAMP8Q9BV40 100 aa4□□□□□ -1.77
SMARCE1P3-201ENST00000553649 TMEM242Q9NWH2 141 aa4□□□□□ -1.77
SMARCE1P3-201ENST00000553649 TXNL4BQ9NX01 149 aaKnown RBP4□□□□□ -1.77
SMARCE1P3-201ENST00000553649 SHPKQ9UHJ6 478 aa4□□□□□ -1.77
SMARCE1P3-201ENST00000553649 RABAC1Q9UI14 185 aa4□□□□□ -1.77
SMARCE1P3-201ENST00000553649 KLK9Q9UKQ9 250 aa4□□□□□ -1.77
SMARCE1P3-201ENST00000553649 TNFSF18Q9UNG2 199 aa4□□□□□ -1.77
SMARCE1P3-201ENST00000553649 NSG2Q9Y328 171 aa4□□□□□ -1.77
SMARCE1P3-201ENST00000553649 ETV7Q9Y603 341 aa4□□□□□ -1.77
SMARCE1P3-201ENST00000553649 FAT3Q8TDW7 4589 aa3.99□□□□□ -1.77
SMARCE1P3-201ENST00000553649 FXYD6-FXYD2A0A087WZ82 144 aa3.99□□□□□ -1.77
SMARCE1P3-201ENST00000553649 TEX50A0A1B0GTY4 177 aa3.99□□□□□ -1.77
SMARCE1P3-201ENST00000553649 KNCNA6PVL3 124 aa3.99□□□□□ -1.77
SMARCE1P3-201ENST00000553649 K7EIM0 57 aa3.99□□□□□ -1.77
SMARCE1P3-201ENST00000553649 K7EMT4 169 aa3.99□□□□□ -1.77
SMARCE1P3-201ENST00000553649 CTDSPLO15194 276 aa3.99□□□□□ -1.77
SMARCE1P3-201ENST00000553649 GSTZ1O43708 216 aaPredicted RBP3.99□□□□□ -1.77
SMARCE1P3-201ENST00000553649 APOHP02749 345 aaPredicted RBP3.99□□□□□ -1.77
SMARCE1P3-201ENST00000553649 CTSGP08311 255 aa3.99□□□□□ -1.77
SMARCE1P3-201ENST00000553649 P0DMU3 169 aa3.99□□□□□ -1.77
SMARCE1P3-201ENST00000553649 FAM231AP0DMU4 169 aa3.99□□□□□ -1.77
SMARCE1P3-201ENST00000553649 FAM231CP0DMU5 169 aa3.99□□□□□ -1.77
SMARCE1P3-201ENST00000553649 PMCHP20382 165 aa3.99□□□□□ -1.77
SMARCE1P3-201ENST00000553649 FGF9P31371 208 aaPredicted RBP3.99□□□□□ -1.77
SMARCE1P3-201ENST00000553649 AMTP48728 403 aa3.99□□□□□ -1.77
SMARCE1P3-201ENST00000553649 HNRNPA3P51991 378 aaKnown RBP3.99□□□□□ -1.77
SMARCE1P3-201ENST00000553649 EMP1P54849 157 aa3.99□□□□□ -1.77
SMARCE1P3-201ENST00000553649 TAS2R31P59538 309 aa3.99□□□□□ -1.77
SMARCE1P3-201ENST00000553649 ERVK-16P61578 105 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms