RNA–Protein interactions for RNA: ENST00000553289.5

SYNE2-208, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 5,261 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-208ENST00000553289 IGLC7A0M8Q6 106 aa9.14□□□□□ -0.95
SYNE2-208ENST00000553289 SOCS3O14543 225 aa9.14□□□□□ -0.95
SYNE2-208ENST00000553289 NPYP01303 97 aa9.14□□□□□ -0.95
SYNE2-208ENST00000553289 NCOR1O75376 2440 aa9.14□□□□□ -0.95
SYNE2-208ENST00000553289 SPINK8P0C7L1 97 aa9.14□□□□□ -0.95
SYNE2-208ENST00000553289 APOC4P55056 127 aa9.14□□□□□ -0.95
SYNE2-208ENST00000553289 GAGE2AQ6NT46 116 aa9.14□□□□□ -0.95
SYNE2-208ENST00000553289 IGLL1P15814 213 aa9.13□□□□□ -0.95
SYNE2-208ENST00000553289 KLF5Q13887 457 aaPredicted RBP9.13□□□□□ -0.95
SYNE2-208ENST00000553289 CR1LQ2VPA4 569 aa9.13□□□□□ -0.95
SYNE2-208ENST00000553289 GTSF1LQ9H1H1 148 aa9.13□□□□□ -0.95
SYNE2-208ENST00000553289 ZNF561-AS1K7EIQ3 104 aa9.13□□□□□ -0.95
SYNE2-208ENST00000553289 IGFL2Q6UWQ7 119 aa9.13□□□□□ -0.95
SYNE2-208ENST00000553289 ZNF493Q6ZR52 646 aa9.13□□□□□ -0.95
SYNE2-208ENST00000553289 C11orf53Q8IXP5 236 aa9.13□□□□□ -0.95
SYNE2-208ENST00000553289 PPDPFLQ8WWR9 84 aa9.13□□□□□ -0.95
SYNE2-208ENST00000553289 HERVK_113P63121 156 aa9.13□□□□□ -0.95
SYNE2-208ENST00000553289 NDUFA12Q9UI09 145 aa9.13□□□□□ -0.95
SYNE2-208ENST00000553289 IGF2-ASQ6U949 168 aa9.12□□□□□ -0.95
SYNE2-208ENST00000553289 FOXI2Q6ZQN5 318 aa9.12□□□□□ -0.95
SYNE2-208ENST00000553289 Q96MF0 132 aa9.12□□□□□ -0.95
SYNE2-208ENST00000553289 ANAPC1Q9H1A4 1944 aa9.12□□□□□ -0.95
SYNE2-208ENST00000553289 DEFB121Q5J5C9 76 aa9.12□□□□□ -0.95
SYNE2-208ENST00000553289 C3orf56Q8N813 242 aa9.12□□□□□ -0.95
SYNE2-208ENST00000553289 ZNRF2Q8NHG8 242 aa9.12□□□□□ -0.95
SYNE2-208ENST00000553289 MRPL35Q9NZE8 188 aaKnown RBP9.12□□□□□ -0.95
SYNE2-208ENST00000553289 YLPM1P49750 1951 aaKnown RBP9.12□□□□□ -0.95
SYNE2-208ENST00000553289 DIAPH2-AS1Q14236 149 aa9.12□□□□□ -0.95
SYNE2-208ENST00000553289 RHOHQ15669 191 aa9.12□□□□□ -0.95
SYNE2-208ENST00000553289 UTF1Q5T230 341 aa9.12□□□□□ -0.95
SYNE2-208ENST00000553289 KIAA1671Q9BY89 1806 aa9.12□□□□□ -0.95
SYNE2-208ENST00000553289 DOCK8Q8NF50 2099 aa9.12□□□□□ -0.95
SYNE2-208ENST00000553289 K7EP34 96 aa9.12□□□□□ -0.95
SYNE2-208ENST00000553289 LHBP01229 141 aa9.12□□□□□ -0.95
SYNE2-208ENST00000553289 NBL1P41271 181 aa9.12□□□□□ -0.95
SYNE2-208ENST00000553289 SHISA9B4DS77 424 aa9.11□□□□□ -0.95
SYNE2-208ENST00000553289 F5H768 121 aa9.11□□□□□ -0.95
SYNE2-208ENST00000553289 SLX1AQ9BQ83 275 aa9.11□□□□□ -0.95
SYNE2-208ENST00000553289 ROS1P08922 2347 aa9.11□□□□□ -0.95
SYNE2-208ENST00000553289 TRAV26-2A0A0B4J265 109 aa9.11□□□□□ -0.95
SYNE2-208ENST00000553289 HOXB4P17483 251 aaPredicted RBP9.11□□□□□ -0.95
SYNE2-208ENST00000553289 CEND1Q8N111 149 aa9.11□□□□□ -0.95
SYNE2-208ENST00000553289 PRO1854Q9UHT4 67 aa9.11□□□□□ -0.95
SYNE2-208ENST00000553289 HELZP42694 1942 aaKnown RBP9.11□□□□□ -0.95
SYNE2-208ENST00000553289 K7EN84 100 aa9.11□□□□□ -0.95
SYNE2-208ENST00000553289 FRMPD3Q5JV73 1810 aa9.11□□□□□ -0.95
SYNE2-208ENST00000553289 SPTBN2O15020 2390 aa9.11□□□□□ -0.95
SYNE2-208ENST00000553289 TRAV13-2A0A0B4J235 113 aa9.1□□□□□ -0.95
SYNE2-208ENST00000553289 IGHV3-16A0A0C4DH30 117 aa9.1□□□□□ -0.95
SYNE2-208ENST00000553289 C22orf46C9J442 243 aa9.1□□□□□ -0.95
SYNE2-208ENST00000553289 BVES-AS1Q5T3Y7 98 aa9.1□□□□□ -0.95
SYNE2-208ENST00000553289 POLEQ07864 2286 aa9.1□□□□□ -0.95
SYNE2-208ENST00000553289 TCF15Q12870 199 aa9.1□□□□□ -0.95
SYNE2-208ENST00000553289 ZNF625Q96I27 306 aaPredicted RBP9.1□□□□□ -0.95
SYNE2-208ENST00000553289 ZNF407Q9C0G0 2248 aa9.1□□□□□ -0.95
SYNE2-208ENST00000553289 GAGE7O76087 117 aa9.1□□□□□ -0.95
SYNE2-208ENST00000553289 GAGE12FP0CL80 117 aa9.1□□□□□ -0.95
SYNE2-208ENST00000553289 GAGE12GP0CL81 117 aa9.1□□□□□ -0.95
SYNE2-208ENST00000553289 GAGE12IP0CL82 117 aa9.1□□□□□ -0.95
SYNE2-208ENST00000553289 NPBQ8NG41 125 aa9.1□□□□□ -0.95
SYNE2-208ENST00000553289 CTSZQ9UBR2 303 aa9.1□□□□□ -0.95
SYNE2-208ENST00000553289 NUP210Q8TEM1 1887 aaPredicted RBP9.1□□□□□ -0.95
SYNE2-208ENST00000553289 TRAV12-2A0A075B6T6 113 aa9.1□□□□□ -0.95
SYNE2-208ENST00000553289 J3QQQ9 107 aa9.1□□□□□ -0.95
SYNE2-208ENST00000553289 NDUFS7O75251 213 aa9.1□□□□□ -0.95
SYNE2-208ENST00000553289 ZNF48Q96MX3 618 aaPredicted RBP9.1□□□□□ -0.95
SYNE2-208ENST00000553289 COA6Q5JTJ3 125 aaKnown RBP9.09□□□□□ -0.95
SYNE2-208ENST00000553289 RMI2Q96E14 147 aa9.09□□□□□ -0.95
SYNE2-208ENST00000553289 FGF6P10767 208 aa9.09□□□□□ -0.95
SYNE2-208ENST00000553289 HLA-DMBP28068 263 aa9.09□□□□□ -0.95
SYNE2-208ENST00000553289 FAM120AOSQ5T036 256 aa9.09□□□□□ -0.95
SYNE2-208ENST00000553289 A0A1W2PPM0 123 aa9.08□□□□□ -0.96
SYNE2-208ENST00000553289 ZNF747Q9BV97 191 aa9.08□□□□□ -0.96
SYNE2-208ENST00000553289 EDA2RQ9HAV5 297 aa9.08□□□□□ -0.96
SYNE2-208ENST00000553289 VPREB3Q9UKI3 123 aa9.08□□□□□ -0.96
SYNE2-208ENST00000553289 RNF152Q8N8N0 203 aa9.08□□□□□ -0.96
SYNE2-208ENST00000553289 PKDREJQ9NTG1 2253 aa9.08□□□□□ -0.96
SYNE2-208ENST00000553289 AGPAT4-IT1Q9H0P7 198 aa9.08□□□□□ -0.96
SYNE2-208ENST00000553289 RIF1Q5UIP0 2472 aaKnown RBP9.08□□□□□ -0.96
SYNE2-208ENST00000553289 DYNAPQ8N1N2 210 aa9.08□□□□□ -0.96
SYNE2-208ENST00000553289 NKAPP1Q8N9T2 125 aa9.08□□□□□ -0.96
SYNE2-208ENST00000553289 IGFBPL1Q8WX77 278 aa9.08□□□□□ -0.96
SYNE2-208ENST00000553289 PFN2P35080 140 aa9.07□□□□□ -0.96
SYNE2-208ENST00000553289 CFHR3Q02985 330 aa9.07□□□□□ -0.96
SYNE2-208ENST00000553289 LYPD6Q86Y78 171 aa9.07□□□□□ -0.96
SYNE2-208ENST00000553289 UBL5Q9BZL1 73 aa9.07□□□□□ -0.96
SYNE2-208ENST00000553289 K7EP13 123 aa9.07□□□□□ -0.96
SYNE2-208ENST00000553289 GAGE6Q13070 117 aa9.07□□□□□ -0.96
SYNE2-208ENST00000553289 DIDO1Q9BTC0 2240 aaKnown RBP9.07□□□□□ -0.96
SYNE2-208ENST00000553289 CENPVL3A0A0U1RRI6 287 aa9.07□□□□□ -0.96
SYNE2-208ENST00000553289 EGR2P11161 476 aaPredicted RBP9.07□□□□□ -0.96
SYNE2-208ENST00000553289 LINC01545Q5VT33 79 aa9.07□□□□□ -0.96
SYNE2-208ENST00000553289 COL6A6A6NMZ7 2263 aa9.07□□□□□ -0.96
SYNE2-208ENST00000553289 FGF23Q9GZV9 251 aaPredicted RBP9.06□□□□□ -0.96
SYNE2-208ENST00000553289 FOXE3Q13461 319 aa9.06□□□□□ -0.96
SYNE2-208ENST00000553289 I3L2K1 104 aa9.06□□□□□ -0.96
SYNE2-208ENST00000553289 GP9P14770 177 aa9.06□□□□□ -0.96
SYNE2-208ENST00000553289 MAPK1IP1LQ8NDC0 245 aa9.06□□□□□ -0.96
SYNE2-208ENST00000553289 WNK2Q9Y3S1 2297 aa9.06□□□□□ -0.96
SYNE2-208ENST00000553289 IGHV3-38A0A0C4DH36 116 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms