RNA–Protein interactions for RNA: ENST00000553237.5

CDK4-215, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 952 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-215ENST00000553237 CYTL1Q9NRR1 136 aa11.09□□□□□ -0.63
CDK4-215ENST00000553237 ZNF492Q9P255 531 aa11.09□□□□□ -0.63
CDK4-215ENST00000553237 LINC00588Q9Y4M8 146 aa11.09□□□□□ -0.63
CDK4-215ENST00000553237 STAG3L2P0CL84 134 aa11.08□□□□□ -0.64
CDK4-215ENST00000553237 STAG3L3P0CL85 134 aa11.08□□□□□ -0.64
CDK4-215ENST00000553237 ARL14EPLP0DKL9 152 aa11.08□□□□□ -0.64
CDK4-215ENST00000553237 C1orf134Q5TEV5 83 aa11.08□□□□□ -0.64
CDK4-215ENST00000553237 EIF4E3Q8N5X7 224 aaKnown RBP11.08□□□□□ -0.64
CDK4-215ENST00000553237 C11orf72Q8NBR9 251 aa11.08□□□□□ -0.64
CDK4-215ENST00000553237 ZNF680Q8NEM1 530 aa11.08□□□□□ -0.64
CDK4-215ENST00000553237 ZNRF2Q8NHG8 242 aa11.08□□□□□ -0.64
CDK4-215ENST00000553237 Q8TAT8 98 aa11.08□□□□□ -0.64
CDK4-215ENST00000553237 HYLS1Q96M11 299 aa11.08□□□□□ -0.64
CDK4-215ENST00000553237 ACTR3CQ9C0K3 210 aaPredicted RBP11.08□□□□□ -0.64
CDK4-215ENST00000553237 TMPRSS5Q9H3S3 457 aa11.08□□□□□ -0.64
CDK4-215ENST00000553237 TRGV1A0A0A0MS02 117 aa11.07□□□□□ -0.64
CDK4-215ENST00000553237 PGPA6NDG6 321 aa11.07□□□□□ -0.64
CDK4-215ENST00000553237 RGS13O14921 159 aa11.07□□□□□ -0.64
CDK4-215ENST00000553237 ZNF138P52744 262 aa11.07□□□□□ -0.64
CDK4-215ENST00000553237 SOHLH1Q5JUK2 328 aa11.07□□□□□ -0.64
CDK4-215ENST00000553237 SSX7Q7RTT5 188 aa11.07□□□□□ -0.64
CDK4-215ENST00000553237 KCNRGQ8N5I3 272 aa11.07□□□□□ -0.64
CDK4-215ENST00000553237 RXFP4Q8TDU9 374 aa11.07□□□□□ -0.64
CDK4-215ENST00000553237 OTORQ9NRC9 128 aa11.07□□□□□ -0.64
CDK4-215ENST00000553237 TP53TG3Q9ULZ0 132 aa11.07□□□□□ -0.64
CDK4-215ENST00000553237 KLF12Q9Y4X4 402 aa11.07□□□□□ -0.64
CDK4-215ENST00000553237 TRGV2A0A075B6R0 118 aa11.06□□□□□ -0.64
CDK4-215ENST00000553237 HMSDA8MTL9 139 aa11.06□□□□□ -0.64
CDK4-215ENST00000553237 NMBP08949 121 aa11.06□□□□□ -0.64
CDK4-215ENST00000553237 ANXA2RQ3ZCQ2 193 aa11.06□□□□□ -0.64
CDK4-215ENST00000553237 ARPC5LQ9BPX5 153 aa11.06□□□□□ -0.64
CDK4-215ENST00000553237 LINC00467Q9BRT7 94 aa11.06□□□□□ -0.64
CDK4-215ENST00000553237 NBDYA0A0U1RRE5 68 aa11.05□□□□□ -0.64
CDK4-215ENST00000553237 RBAKDNA6NC62 111 aa11.05□□□□□ -0.64
CDK4-215ENST00000553237 DIRC3C9JPN6 131 aa11.05□□□□□ -0.64
CDK4-215ENST00000553237 GCHFRP30047 84 aa11.05□□□□□ -0.64
CDK4-215ENST00000553237 ZNF345Q14585 488 aa11.05□□□□□ -0.64
CDK4-215ENST00000553237 FAM74A1Q5RGS3 127 aa11.05□□□□□ -0.64
CDK4-215ENST00000553237 Q6ZNX1 250 aa11.05□□□□□ -0.64
CDK4-215ENST00000553237 CMTM2Q8TAZ6 248 aa11.05□□□□□ -0.64
CDK4-215ENST00000553237 IGHV1OR15-1A0A075B7D0 117 aa11.04□□□□□ -0.64
CDK4-215ENST00000553237 CXorf1O96002 111 aa11.04□□□□□ -0.64
CDK4-215ENST00000553237 TCL1AP56279 114 aa11.04□□□□□ -0.64
CDK4-215ENST00000553237 ZNF726P1Q15940 193 aa11.04□□□□□ -0.64
CDK4-215ENST00000553237 AKR1C8PQ5T2L2 129 aa11.04□□□□□ -0.64
CDK4-215ENST00000553237 SUN5Q8TC36 379 aa11.04□□□□□ -0.64
CDK4-215ENST00000553237 ST6GAL2Q96JF0 529 aa11.04□□□□□ -0.64
CDK4-215ENST00000553237 RPH3ALQ9UNE2 315 aa11.04□□□□□ -0.64
CDK4-215ENST00000553237 HERC2O95714 4834 aa11.04□□□□□ -0.64
CDK4-215ENST00000553237 A0A0D9SG52 128 aa11.03□□□□□ -0.64
CDK4-215ENST00000553237 SPINK4O60575 86 aa11.03□□□□□ -0.64
CDK4-215ENST00000553237 ESRGQ1W209 222 aa11.03□□□□□ -0.64
CDK4-215ENST00000553237 IQCF2Q8IXL9 164 aa11.03□□□□□ -0.64
CDK4-215ENST00000553237 TMEM167BQ9NRX6 74 aa11.03□□□□□ -0.64
CDK4-215ENST00000553237 MRPL16Q9NX20 251 aaKnown RBP11.03□□□□□ -0.64
CDK4-215ENST00000553237 CTXND1A0A1B0GTU2 59 aa11.02□□□□□ -0.65
CDK4-215ENST00000553237 IGHV3-53P01767 116 aa11.02□□□□□ -0.65
CDK4-215ENST00000553237 GNG5P63218 68 aa11.02□□□□□ -0.65
CDK4-215ENST00000553237 MUC21Q5SSG8 566 aa11.02□□□□□ -0.65
CDK4-215ENST00000553237 IBA57Q5T440 356 aaKnown RBP11.02□□□□□ -0.65
CDK4-215ENST00000553237 GOLT1AQ6ZVE7 132 aa11.02□□□□□ -0.65
CDK4-215ENST00000553237 VSIG2Q96IQ7 327 aa11.02□□□□□ -0.65
CDK4-215ENST00000553237 ZNF471Q9BX82 626 aaPredicted RBP11.02□□□□□ -0.65
CDK4-215ENST00000553237 Q9H8V8 135 aa11.02□□□□□ -0.65
CDK4-215ENST00000553237 KIAA1109Q2LD37 5005 aa11.01□□□□□ -0.65
CDK4-215ENST00000553237 TRBV7-9A0A0J9YWB2 115 aa11.01□□□□□ -0.65
CDK4-215ENST00000553237 KANTRA0A1W2PQU2 76 aa11.01□□□□□ -0.65
CDK4-215ENST00000553237 H3BNG1 76 aa11.01□□□□□ -0.65
CDK4-215ENST00000553237 BCL2L11O43521 198 aa11.01□□□□□ -0.65
CDK4-215ENST00000553237 TNP2Q05952 138 aa11.01□□□□□ -0.65
CDK4-215ENST00000553237 C6orf223Q8N319 242 aa11.01□□□□□ -0.65
CDK4-215ENST00000553237 ARL6IP6Q8N6S5 226 aa11.01□□□□□ -0.65
CDK4-215ENST00000553237 C18orf15Q96N68 181 aa11.01□□□□□ -0.65
CDK4-215ENST00000553237 A0A096LPF7 62 aa11□□□□□ -0.65
CDK4-215ENST00000553237 FGF8P55075 233 aaPredicted RBP11□□□□□ -0.65
CDK4-215ENST00000553237 SUMO1P63165 101 aaKnown RBP11□□□□□ -0.65
CDK4-215ENST00000553237 TMUB2Q71RG4 321 aa11□□□□□ -0.65
CDK4-215ENST00000553237 PKD1P98161 4303 aa11□□□□□ -0.65
CDK4-215ENST00000553237 PKHD1P08F94 4074 aa10.99□□□□□ -0.65
CDK4-215ENST00000553237 hCG_2014768A0A024R1R8 64 aa10.99□□□□□ -0.65
CDK4-215ENST00000553237 TRAV8-1A0A0A6YYK1 113 aa10.99□□□□□ -0.65
CDK4-215ENST00000553237 GGTLC3B5MD39 225 aa10.99□□□□□ -0.65
CDK4-215ENST00000553237 PFDN1O60925 122 aa10.99□□□□□ -0.65
CDK4-215ENST00000553237 ZNF415Q09FC8 603 aa10.99□□□□□ -0.65
CDK4-215ENST00000553237 TCTE3Q8IZS6 198 aa10.99□□□□□ -0.65
CDK4-215ENST00000553237 C5orf17Q8NAS9 161 aa10.99□□□□□ -0.65
CDK4-215ENST00000553237 TMED6Q8WW62 240 aa10.99□□□□□ -0.65
CDK4-215ENST00000553237 MDFICQ9P1T7 246 aa10.99□□□□□ -0.65
CDK4-215ENST00000553237 LENEPQ9Y5L5 61 aa10.99□□□□□ -0.65
CDK4-215ENST00000553237 MAP1LC3B2A6NCE7 125 aa10.98□□□□□ -0.65
CDK4-215ENST00000553237 PAX4O43316 350 aa10.98□□□□□ -0.65
CDK4-215ENST00000553237 SEC11BP0C7V7 166 aa10.98□□□□□ -0.65
CDK4-215ENST00000553237 FHITP49789 147 aa10.98□□□□□ -0.65
CDK4-215ENST00000553237 TMEM183BQ1AE95 376 aa10.98□□□□□ -0.65
CDK4-215ENST00000553237 ZNF575Q86XF7 245 aa10.98□□□□□ -0.65
CDK4-215ENST00000553237 TMEM183AQ8IXX5 376 aa10.98□□□□□ -0.65
CDK4-215ENST00000553237 SGK494Q96LW2 274 aa10.98□□□□□ -0.65
CDK4-215ENST00000553237 KRTAP17-1Q9BYP8 105 aa10.98□□□□□ -0.65
CDK4-215ENST00000553237 MAP1LC3BQ9GZQ8 125 aa10.98□□□□□ -0.65
CDK4-215ENST00000553237 NAGKQ9UJ70 344 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms