RNA–Protein interactions for RNA: ENST00000550102.5

CHMP1A-208, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 5 BASIC

Gene CHMP1A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-208ENST00000550102 GAGE7O76087 117 aa12.13□□□□□ -0.47
CHMP1A-208ENST00000550102 GAGE12FP0CL80 117 aa12.13□□□□□ -0.47
CHMP1A-208ENST00000550102 GAGE12GP0CL81 117 aa12.13□□□□□ -0.47
CHMP1A-208ENST00000550102 GAGE12IP0CL82 117 aa12.13□□□□□ -0.47
CHMP1A-208ENST00000550102 GNG5P63218 68 aa12.13□□□□□ -0.47
CHMP1A-208ENST00000550102 ZNF345Q14585 488 aa12.13□□□□□ -0.47
CHMP1A-208ENST00000550102 AKR1C8PQ5T2L2 129 aa12.13□□□□□ -0.47
CHMP1A-208ENST00000550102 IBA57Q5T440 356 aaKnown RBP12.13□□□□□ -0.47
CHMP1A-208ENST00000550102 IQCF2Q8IXL9 164 aa12.13□□□□□ -0.47
CHMP1A-208ENST00000550102 C5orf17Q8NAS9 161 aa12.13□□□□□ -0.47
CHMP1A-208ENST00000550102 SUN5Q8TC36 379 aa12.13□□□□□ -0.47
CHMP1A-208ENST00000550102 ARPC5LQ9BPX5 153 aa12.13□□□□□ -0.47
CHMP1A-208ENST00000550102 CTXND1A0A1B0GTU2 59 aa12.12□□□□□ -0.47
CHMP1A-208ENST00000550102 SERTM2A0A1B0GWG4 89 aa12.12□□□□□ -0.47
CHMP1A-208ENST00000550102 TCL1AP56279 114 aa12.12□□□□□ -0.47
CHMP1A-208ENST00000550102 Q6ZTI0 123 aa12.12□□□□□ -0.47
CHMP1A-208ENST00000550102 SSX7Q7RTT5 188 aa12.12□□□□□ -0.47
CHMP1A-208ENST00000550102 MUC4Q99102 2169 aa12.11□□□□□ -0.47
CHMP1A-208ENST00000550102 ZNF415Q09FC8 603 aa12.11□□□□□ -0.47
CHMP1A-208ENST00000550102 Q6AWC8 147 aa12.11□□□□□ -0.47
CHMP1A-208ENST00000550102 Q6ZQT7 251 aa12.11□□□□□ -0.47
CHMP1A-208ENST00000550102 KCNRGQ8N5I3 272 aa12.11□□□□□ -0.47
CHMP1A-208ENST00000550102 TRGV1A0A0A0MS02 117 aa12.1□□□□□ -0.47
CHMP1A-208ENST00000550102 TRAV8-1A0A0A6YYK1 113 aa12.1□□□□□ -0.47
CHMP1A-208ENST00000550102 GGTLC3B5MD39 225 aa12.1□□□□□ -0.47
CHMP1A-208ENST00000550102 K7EQM0 130 aa12.1□□□□□ -0.47
CHMP1A-208ENST00000550102 ZNF726P1Q15940 193 aa12.1□□□□□ -0.47
CHMP1A-208ENST00000550102 RNF212Q495C1 297 aa12.1□□□□□ -0.47
CHMP1A-208ENST00000550102 NDFIP1Q9BT67 221 aa12.1□□□□□ -0.47
CHMP1A-208ENST00000550102 TMPRSS5Q9H3S3 457 aa12.1□□□□□ -0.47
CHMP1A-208ENST00000550102 CYTL1Q9NRR1 136 aa12.1□□□□□ -0.47
CHMP1A-208ENST00000550102 TP53TG3Q9ULZ0 132 aa12.1□□□□□ -0.47
CHMP1A-208ENST00000550102 EPPK1P58107 5090 aaKnown RBP12.1□□□□□ -0.47
CHMP1A-208ENST00000550102 TRGV2A0A075B6R0 118 aa12.09□□□□□ -0.47
CHMP1A-208ENST00000550102 HMSDA8MTL9 139 aa12.09□□□□□ -0.47
CHMP1A-208ENST00000550102 NUDT3O95989 172 aa12.09□□□□□ -0.47
CHMP1A-208ENST00000550102 TCRAP04437 139 aa12.09□□□□□ -0.47
CHMP1A-208ENST00000550102 MUC21Q5SSG8 566 aa12.09□□□□□ -0.47
CHMP1A-208ENST00000550102 TREM1Q9NP99 234 aa12.09□□□□□ -0.47
CHMP1A-208ENST00000550102 KLF12Q9Y4X4 402 aa12.09□□□□□ -0.47
CHMP1A-208ENST00000550102 F6UZH7 168 aa12.08□□□□□ -0.48
CHMP1A-208ENST00000550102 OR5I1Q13606 314 aa12.08□□□□□ -0.48
CHMP1A-208ENST00000550102 FAM159AQ6UWV7 190 aa12.08□□□□□ -0.48
CHMP1A-208ENST00000550102 C18orf15Q96N68 181 aa12.08□□□□□ -0.48
CHMP1A-208ENST00000550102 NAGKQ9UJ70 344 aa12.08□□□□□ -0.48
CHMP1A-208ENST00000550102 TRGV11A0A075B6L2 103 aa12.07□□□□□ -0.48
CHMP1A-208ENST00000550102 A0A1W2PRE2 83 aa12.07□□□□□ -0.48
CHMP1A-208ENST00000550102 MAP1LC3B2A6NCE7 125 aa12.07□□□□□ -0.48
CHMP1A-208ENST00000550102 SPINK4O60575 86 aa12.07□□□□□ -0.48
CHMP1A-208ENST00000550102 SUMO1P63165 101 aaKnown RBP12.07□□□□□ -0.48
CHMP1A-208ENST00000550102 CYB561D1Q8N8Q1 229 aa12.07□□□□□ -0.48
CHMP1A-208ENST00000550102 OR11H4Q8NGC9 324 aa12.07□□□□□ -0.48
CHMP1A-208ENST00000550102 ATG101Q9BSB4 218 aa12.07□□□□□ -0.48
CHMP1A-208ENST00000550102 MAP1LC3BQ9GZQ8 125 aa12.07□□□□□ -0.48
CHMP1A-208ENST00000550102 TRAV26-1A0A087WT03 109 aa12.06□□□□□ -0.48
CHMP1A-208ENST00000550102 TRAV21A0A0B4J279 112 aa12.06□□□□□ -0.48
CHMP1A-208ENST00000550102 A0A0D9SG52 128 aa12.06□□□□□ -0.48
CHMP1A-208ENST00000550102 KANTRA0A1W2PQU2 76 aa12.06□□□□□ -0.48
CHMP1A-208ENST00000550102 BCL2L11O43521 198 aa12.06□□□□□ -0.48
CHMP1A-208ENST00000550102 HOXA5P20719 270 aa12.06□□□□□ -0.48
CHMP1A-208ENST00000550102 FGF8P55075 233 aaPredicted RBP12.06□□□□□ -0.48
CHMP1A-208ENST00000550102 FAM3BP58499 235 aaPredicted RBP12.06□□□□□ -0.48
CHMP1A-208ENST00000550102 TMEM183BQ1AE95 376 aa12.06□□□□□ -0.48
CHMP1A-208ENST00000550102 LGALS9BQ3B8N2 356 aa12.06□□□□□ -0.48
CHMP1A-208ENST00000550102 TMEM183AQ8IXX5 376 aa12.06□□□□□ -0.48
CHMP1A-208ENST00000550102 TVP23CQ96ET8 276 aa12.06□□□□□ -0.48
CHMP1A-208ENST00000550102 MRPL16Q9NX20 251 aaKnown RBP12.06□□□□□ -0.48
CHMP1A-208ENST00000550102 EPDR1Q9UM22 224 aa12.06□□□□□ -0.48
CHMP1A-208ENST00000550102 FBLL1A6NHQ2 334 aaKnown RBP12.05□□□□□ -0.48
CHMP1A-208ENST00000550102 IFNA7P01567 189 aa12.05□□□□□ -0.48
CHMP1A-208ENST00000550102 UBE2G2P60604 165 aa12.05□□□□□ -0.48
CHMP1A-208ENST00000550102 TDRG1Q3Y452 100 aa12.05□□□□□ -0.48
CHMP1A-208ENST00000550102 TMEM75Q8N9X5 138 aa12.05□□□□□ -0.48
CHMP1A-208ENST00000550102 SGK494Q96LW2 274 aa12.05□□□□□ -0.48
CHMP1A-208ENST00000550102 FRAS1Q86XX4 4008 aa12.04□□□□□ -0.48
CHMP1A-208ENST00000550102 FLI1Q01543 452 aaPredicted RBP12.04□□□□□ -0.48
CHMP1A-208ENST00000550102 ZFP69Q49AA0 526 aa12.04□□□□□ -0.48
CHMP1A-208ENST00000550102 STOML3Q8TAV4 291 aa12.04□□□□□ -0.48
CHMP1A-208ENST00000550102 ZNF471Q9BX82 626 aaPredicted RBP12.04□□□□□ -0.48
CHMP1A-208ENST00000550102 PSG8Q9UQ74 426 aa12.04□□□□□ -0.48
CHMP1A-208ENST00000550102 A0A0J9YY99 117 aa12.03□□□□□ -0.48
CHMP1A-208ENST00000550102 UMAD1C9J7I0 102 aa12.03□□□□□ -0.48
CHMP1A-208ENST00000550102 H3BNG1 76 aa12.03□□□□□ -0.48
CHMP1A-208ENST00000550102 PFDN1O60925 122 aa12.03□□□□□ -0.48
CHMP1A-208ENST00000550102 IGLV2-11P01706 119 aa12.03□□□□□ -0.48
CHMP1A-208ENST00000550102 SEC11BP0C7V7 166 aa12.03□□□□□ -0.48
CHMP1A-208ENST00000550102 CCL18P55774 89 aa12.03□□□□□ -0.48
CHMP1A-208ENST00000550102 EIF5AP63241 154 aaKnown RBP12.03□□□□□ -0.48
CHMP1A-208ENST00000550102 SPXQ9BT56 116 aa12.03□□□□□ -0.48
CHMP1A-208ENST00000550102 NKX6-2Q9C056 277 aaPredicted RBP12.03□□□□□ -0.48
CHMP1A-208ENST00000550102 SDF2L1Q9HCN8 221 aa12.03□□□□□ -0.48
CHMP1A-208ENST00000550102 MDFICQ9P1T7 246 aa12.03□□□□□ -0.48
CHMP1A-208ENST00000550102 IGLV2-18A0A075B6J9 118 aa12.02□□□□□ -0.49
CHMP1A-208ENST00000550102 FAM74A7A6NL05 159 aa12.02□□□□□ -0.49
CHMP1A-208ENST00000550102 PEX7O00628 323 aa12.02□□□□□ -0.49
CHMP1A-208ENST00000550102 PPT1P50897 306 aa12.02□□□□□ -0.49
CHMP1A-208ENST00000550102 PRNTQ86SH4 94 aa12.02□□□□□ -0.49
CHMP1A-208ENST00000550102 KCNS1Q96KK3 526 aa12.02□□□□□ -0.49
CHMP1A-208ENST00000550102 C8orf49Q96NF6 230 aa12.02□□□□□ -0.49
CHMP1A-208ENST00000550102 BIRC6Q9NR09 4857 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms