RNA–Protein interactions for RNA: ENST00000549131.1

LINC00661-203, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best)

Gene LINC00661, Length 512 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-203ENST00000549131 TRBV7-9A0A0J9YWB2 115 aa10.26□□□□□ -0.77
LINC00661-203ENST00000549131 PRSS29PA6NIE9 313 aa10.26□□□□□ -0.77
LINC00661-203ENST00000549131 ARL14EPLP0DKL9 152 aa10.26□□□□□ -0.77
LINC00661-203ENST00000549131 CDC34P49427 236 aaPredicted RBP10.26□□□□□ -0.77
LINC00661-203ENST00000549131 IBA57Q5T440 356 aaKnown RBP10.26□□□□□ -0.77
LINC00661-203ENST00000549131 TP53TG3Q9ULZ0 132 aa10.26□□□□□ -0.77
LINC00661-203ENST00000549131 KLF12Q9Y4X4 402 aa10.26□□□□□ -0.77
LINC00661-203ENST00000549131 FXYD6-FXYD2A0A087WZ82 144 aa10.25□□□□□ -0.77
LINC00661-203ENST00000549131 PGPA6NDG6 321 aa10.25□□□□□ -0.77
LINC00661-203ENST00000549131 ATP6V0CP27449 155 aa10.25□□□□□ -0.77
LINC00661-203ENST00000549131 ZNF415Q09FC8 603 aa10.25□□□□□ -0.77
LINC00661-203ENST00000549131 Q5BKY6 102 aa10.25□□□□□ -0.77
LINC00661-203ENST00000549131 SOHLH1Q5JUK2 328 aa10.25□□□□□ -0.77
LINC00661-203ENST00000549131 MUC21Q5SSG8 566 aa10.25□□□□□ -0.77
LINC00661-203ENST00000549131 OR2G3Q8NGZ4 309 aa10.25□□□□□ -0.77
LINC00661-203ENST00000549131 ASB13Q8WXK3 278 aa10.25□□□□□ -0.77
LINC00661-203ENST00000549131 PSMG3Q9BT73 122 aaPredicted RBP10.25□□□□□ -0.77
LINC00661-203ENST00000549131 MRPL16Q9NX20 251 aaKnown RBP10.25□□□□□ -0.77
LINC00661-203ENST00000549131 GOLT1AQ6ZVE7 132 aa10.24□□□□□ -0.77
LINC00661-203ENST00000549131 SSX7Q7RTT5 188 aa10.24□□□□□ -0.77
LINC00661-203ENST00000549131 INO80EQ8NBZ0 244 aaPredicted RBP10.24□□□□□ -0.77
LINC00661-203ENST00000549131 ZNRF2Q8NHG8 242 aa10.24□□□□□ -0.77
LINC00661-203ENST00000549131 SH3BGRL3Q9H299 93 aa10.24□□□□□ -0.77
LINC00661-203ENST00000549131 LINC00588Q9Y4M8 146 aa10.24□□□□□ -0.77
LINC00661-203ENST00000549131 SPINK4O60575 86 aa10.23□□□□□ -0.77
LINC00661-203ENST00000549131 GNG5P63218 68 aa10.23□□□□□ -0.77
LINC00661-203ENST00000549131 RGS21Q2M5E4 152 aa10.23□□□□□ -0.77
LINC00661-203ENST00000549131 C1orf134Q5TEV5 83 aa10.23□□□□□ -0.77
LINC00661-203ENST00000549131 OR2T35Q8NGX2 323 aa10.23□□□□□ -0.77
LINC00661-203ENST00000549131 TMED6Q8WW62 240 aa10.23□□□□□ -0.77
LINC00661-203ENST00000549131 NAGKQ9UJ70 344 aa10.23□□□□□ -0.77
LINC00661-203ENST00000549131 LENEPQ9Y5L5 61 aa10.23□□□□□ -0.77
LINC00661-203ENST00000549131 NBDYA0A0U1RRE5 68 aa10.22□□□□□ -0.77
LINC00661-203ENST00000549131 A0A1B0GVY2 172 aa10.22□□□□□ -0.77
LINC00661-203ENST00000549131 RNF222A6NCQ9 220 aa10.22□□□□□ -0.77
LINC00661-203ENST00000549131 IGHV3-53P01767 116 aa10.22□□□□□ -0.77
LINC00661-203ENST00000549131 STAG3L2P0CL84 134 aa10.22□□□□□ -0.77
LINC00661-203ENST00000549131 STAG3L3P0CL85 134 aa10.22□□□□□ -0.77
LINC00661-203ENST00000549131 TMEM183BQ1AE95 376 aa10.22□□□□□ -0.77
LINC00661-203ENST00000549131 Q6AWC8 147 aa10.22□□□□□ -0.77
LINC00661-203ENST00000549131 FAM159AQ6UWV7 190 aa10.22□□□□□ -0.77
LINC00661-203ENST00000549131 TMEM183AQ8IXX5 376 aa10.22□□□□□ -0.77
LINC00661-203ENST00000549131 RAB24Q969Q5 203 aa10.22□□□□□ -0.77
LINC00661-203ENST00000549131 ST6GAL2Q96JF0 529 aa10.22□□□□□ -0.77
LINC00661-203ENST00000549131 C18orf15Q96N68 181 aa10.22□□□□□ -0.77
LINC00661-203ENST00000549131 PKHD1P08F94 4074 aa10.22□□□□□ -0.77
LINC00661-203ENST00000549131 TRGV11A0A075B6L2 103 aa10.21□□□□□ -0.77
LINC00661-203ENST00000549131 TRAV8-1A0A0A6YYK1 113 aa10.21□□□□□ -0.77
LINC00661-203ENST00000549131 BORCS7-ASMTA0A0B4J1R7 106 aa10.21□□□□□ -0.77
LINC00661-203ENST00000549131 F6UZH7 168 aa10.21□□□□□ -0.77
LINC00661-203ENST00000549131 H3BNG1 76 aa10.21□□□□□ -0.77
LINC00661-203ENST00000549131 MBP02144 154 aa10.21□□□□□ -0.77
LINC00661-203ENST00000549131 GCHFRP30047 84 aa10.21□□□□□ -0.77
LINC00661-203ENST00000549131 SERF2P84101 59 aa10.21□□□□□ -0.77
LINC00661-203ENST00000549131 RPL7L1Q6DKI1 246 aaKnown RBP10.21□□□□□ -0.77
LINC00661-203ENST00000549131 IQCF2Q8IXL9 164 aa10.21□□□□□ -0.77
LINC00661-203ENST00000549131 TNFSF18Q9UNG2 199 aa10.21□□□□□ -0.77
LINC00661-203ENST00000549131 C5orf17Q8NAS9 161 aa10.2□□□□□ -0.78
LINC00661-203ENST00000549131 VSIG2Q96IQ7 327 aa10.2□□□□□ -0.78
LINC00661-203ENST00000549131 ACTR3CQ9C0K3 210 aaPredicted RBP10.2□□□□□ -0.78
LINC00661-203ENST00000549131 TREM1Q9NP99 234 aa10.2□□□□□ -0.78
LINC00661-203ENST00000549131 PKD1P98161 4303 aa10.2□□□□□ -0.78
LINC00661-203ENST00000549131 CXorf1O96002 111 aa10.19□□□□□ -0.78
LINC00661-203ENST00000549131 ARL6IP6Q8N6S5 226 aa10.19□□□□□ -0.78
LINC00661-203ENST00000549131 SGK494Q96LW2 274 aa10.19□□□□□ -0.78
LINC00661-203ENST00000549131 NDFIP1Q9BT67 221 aa10.19□□□□□ -0.78
LINC00661-203ENST00000549131 MDFICQ9P1T7 246 aa10.19□□□□□ -0.78
LINC00661-203ENST00000549131 KIAA1109Q2LD37 5005 aa10.18□□□□□ -0.78
LINC00661-203ENST00000549131 A0A096LPF7 62 aa10.18□□□□□ -0.78
LINC00661-203ENST00000549131 K7EQM0 130 aa10.18□□□□□ -0.78
LINC00661-203ENST00000549131 TCRAP04437 139 aa10.18□□□□□ -0.78
LINC00661-203ENST00000549131 ESRGQ1W209 222 aa10.18□□□□□ -0.78
LINC00661-203ENST00000549131 TMEM167BQ9NRX6 74 aa10.18□□□□□ -0.78
LINC00661-203ENST00000549131 MRPS16Q9Y3D3 137 aaKnown RBP10.18□□□□□ -0.78
LINC00661-203ENST00000549131 ICOSQ9Y6W8 199 aa10.18□□□□□ -0.78
LINC00661-203ENST00000549131 HERC2O95714 4834 aa10.18□□□□□ -0.78
LINC00661-203ENST00000549131 TRAV21A0A0B4J279 112 aa10.17□□□□□ -0.78
LINC00661-203ENST00000549131 SERTM2A0A1B0GWG4 89 aa10.17□□□□□ -0.78
LINC00661-203ENST00000549131 GGTLC3B5MD39 225 aa10.17□□□□□ -0.78
LINC00661-203ENST00000549131 ARPC5O15511 151 aa10.17□□□□□ -0.78
LINC00661-203ENST00000549131 PAX4O43316 350 aa10.17□□□□□ -0.78
LINC00661-203ENST00000549131 TTC32Q5I0X7 151 aa10.17□□□□□ -0.78
LINC00661-203ENST00000549131 C6orf223Q8N319 242 aa10.17□□□□□ -0.78
LINC00661-203ENST00000549131 TVP23CQ96ET8 276 aa10.17□□□□□ -0.78
LINC00661-203ENST00000549131 C8orf49Q96NF6 230 aa10.17□□□□□ -0.78
LINC00661-203ENST00000549131 SPXQ9BT56 116 aa10.17□□□□□ -0.78
LINC00661-203ENST00000549131 Q9H8V8 135 aa10.17□□□□□ -0.78
LINC00661-203ENST00000549131 TRGV4A0A0C4DH28 118 aa10.16□□□□□ -0.78
LINC00661-203ENST00000549131 G3V3Q6 166 aa10.16□□□□□ -0.78
LINC00661-203ENST00000549131 SFTA3P0C7M3 94 aa10.16□□□□□ -0.78
LINC00661-203ENST00000549131 TDRG1Q3Y452 100 aa10.16□□□□□ -0.78
LINC00661-203ENST00000549131 ZFP69Q49AA0 526 aa10.16□□□□□ -0.78
LINC00661-203ENST00000549131 SUN5Q8TC36 379 aa10.16□□□□□ -0.78
LINC00661-203ENST00000549131 UPK3BQ9BT76 320 aa10.16□□□□□ -0.78
LINC00661-203ENST00000549131 SDF2L1Q9HCN8 221 aa10.16□□□□□ -0.78
LINC00661-203ENST00000549131 PRO0255Q9UI72 69 aa10.16□□□□□ -0.78
LINC00661-203ENST00000549131 CTXND1A0A1B0GTU2 59 aa10.15□□□□□ -0.78
LINC00661-203ENST00000549131 TYMSP04818 313 aa10.15□□□□□ -0.78
LINC00661-203ENST00000549131 SUMO1P63165 101 aaKnown RBP10.15□□□□□ -0.78
LINC00661-203ENST00000549131 AKR1C8PQ5T2L2 129 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms