RNA–Protein interactions for RNA: ENST00000548116.5

SMPDL3B-205, Transcript of sphingomyelin phosphodiesterase acid like 3B, humanhuman

TSL 2

Gene SMPDL3B, Length 1,913 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3B-205ENST00000548116 FOXA3P55318 350 aaPredicted RBP10.17□□□□□ -0.78
SMPDL3B-205ENST00000548116 SNRPD3P62318 126 aaKnown RBP10.17□□□□□ -0.78
SMPDL3B-205ENST00000548116 PAFAH1B2P68402 229 aa10.17□□□□□ -0.78
SMPDL3B-205ENST00000548116 GDF5OSQ5U4N7 250 aa10.17□□□□□ -0.78
SMPDL3B-205ENST00000548116 MRPL54Q6P161 138 aaKnown RBP10.17□□□□□ -0.78
SMPDL3B-205ENST00000548116 NDUFA11Q86Y39 141 aa10.17□□□□□ -0.78
SMPDL3B-205ENST00000548116 ZFAND2AQ8N6M9 145 aa10.17□□□□□ -0.78
SMPDL3B-205ENST00000548116 DYNLRB2Q8TF09 96 aa10.17□□□□□ -0.78
SMPDL3B-205ENST00000548116 SIGLEC8Q9NYZ4 499 aa10.17□□□□□ -0.78
SMPDL3B-205ENST00000548116 TRAV2A0A0B4J234 112 aa10.17□□□□□ -0.78
SMPDL3B-205ENST00000548116 FABP5P3A8MUU1 101 aa10.17□□□□□ -0.78
SMPDL3B-205ENST00000548116 HIST1H2BKO60814 126 aa10.17□□□□□ -0.78
SMPDL3B-205ENST00000548116 HIST1H2BJP06899 126 aa10.17□□□□□ -0.78
SMPDL3B-205ENST00000548116 HIST1H2BOP23527 126 aa10.17□□□□□ -0.78
SMPDL3B-205ENST00000548116 HIST1H2BBP33778 126 aa10.17□□□□□ -0.78
SMPDL3B-205ENST00000548116 HIST1H2BDP58876 126 aa10.17□□□□□ -0.78
SMPDL3B-205ENST00000548116 HIST1H2BCP62807 126 aa10.17□□□□□ -0.78
SMPDL3B-205ENST00000548116 S100A12P80511 92 aa10.17□□□□□ -0.78
SMPDL3B-205ENST00000548116 HIST2H2BEQ16778 126 aa10.17□□□□□ -0.78
SMPDL3B-205ENST00000548116 CD300EQ496F6 205 aaPredicted RBP10.17□□□□□ -0.78
SMPDL3B-205ENST00000548116 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.17□□□□□ -0.78
SMPDL3B-205ENST00000548116 Q6ZQT7 251 aa10.17□□□□□ -0.78
SMPDL3B-205ENST00000548116 HIST1H2BHQ93079 126 aa10.17□□□□□ -0.78
SMPDL3B-205ENST00000548116 HIST1H2BNQ99877 126 aa10.17□□□□□ -0.78
SMPDL3B-205ENST00000548116 HIST1H2BMQ99879 126 aa10.17□□□□□ -0.78
SMPDL3B-205ENST00000548116 JMJD1CQ15652 2540 aa10.16□□□□□ -0.78
SMPDL3B-205ENST00000548116 TMEM189A5PLL7 270 aa10.16□□□□□ -0.78
SMPDL3B-205ENST00000548116 TRGC1P0CF51 173 aa10.16□□□□□ -0.78
SMPDL3B-205ENST00000548116 FABP9Q0Z7S8 132 aa10.16□□□□□ -0.78
SMPDL3B-205ENST00000548116 RBPMS2Q6ZRY4 209 aaKnown RBP10.16□□□□□ -0.78
SMPDL3B-205ENST00000548116 PGLYRP4Q96LB8 373 aa10.16□□□□□ -0.78
SMPDL3B-205ENST00000548116 C11orf21Q9P2W6 132 aa10.16□□□□□ -0.78
SMPDL3B-205ENST00000548116 TRAPPC1Q9Y5R8 145 aa10.16□□□□□ -0.78
SMPDL3B-205ENST00000548116 TMSB15BA0A087X1C1 80 aa10.15□□□□□ -0.78
SMPDL3B-205ENST00000548116 A0A0J9YX75 114 aa10.15□□□□□ -0.78
SMPDL3B-205ENST00000548116 A0A1B0GXF2 115 aa10.15□□□□□ -0.78
SMPDL3B-205ENST00000548116 CD33P20138 364 aa10.15□□□□□ -0.78
SMPDL3B-205ENST00000548116 TMEM136Q6ZRR5 245 aa10.15□□□□□ -0.78
SMPDL3B-205ENST00000548116 TRBV7-9A0A0J9YWB2 115 aa10.15□□□□□ -0.79
SMPDL3B-205ENST00000548116 CRISP2P16562 243 aa10.15□□□□□ -0.79
SMPDL3B-205ENST00000548116 LINC01559Q495D7 138 aa10.15□□□□□ -0.79
SMPDL3B-205ENST00000548116 APRG1Q8IVJ8 170 aa10.15□□□□□ -0.79
SMPDL3B-205ENST00000548116 GNB1LQ9BYB4 327 aa10.15□□□□□ -0.79
SMPDL3B-205ENST00000548116 KIR3DS1Q14943 382 aa10.14□□□□□ -0.79
SMPDL3B-205ENST00000548116 ZNF256Q9Y2P7 627 aaPredicted RBP10.14□□□□□ -0.79
SMPDL3B-205ENST00000548116 AGRNO00468 2067 aa10.14□□□□□ -0.79
SMPDL3B-205ENST00000548116 IGKV3D-20A0A0C4DH25 116 aa10.13□□□□□ -0.79
SMPDL3B-205ENST00000548116 SNURFLB1AK76 121 aa10.13□□□□□ -0.79
SMPDL3B-205ENST00000548116 RASL11AQ6T310 242 aa10.13□□□□□ -0.79
SMPDL3B-205ENST00000548116 ATP5L2Q7Z4Y8 100 aa10.13□□□□□ -0.79
SMPDL3B-205ENST00000548116 TEP1Q99973 2627 aaKnown RBP10.13□□□□□ -0.79
SMPDL3B-205ENST00000548116 MRPL18Q9H0U6 180 aaKnown RBP10.13□□□□□ -0.79
SMPDL3B-205ENST00000548116 SAV1Q9H4B6 383 aaPredicted RBP10.13□□□□□ -0.79
SMPDL3B-205ENST00000548116 TRAV25A0A0B4J276 109 aa10.13□□□□□ -0.79
SMPDL3B-205ENST00000548116 J3KRW8 73 aa10.13□□□□□ -0.79
SMPDL3B-205ENST00000548116 ORM1P02763 201 aa10.13□□□□□ -0.79
SMPDL3B-205ENST00000548116 RPS20P60866 119 aaKnown RBP10.13□□□□□ -0.79
SMPDL3B-205ENST00000548116 COX19Q49B96 90 aa10.13□□□□□ -0.79
SMPDL3B-205ENST00000548116 WDR73Q6P4I2 378 aa10.13□□□□□ -0.79
SMPDL3B-205ENST00000548116 FOXI2Q6ZQN5 318 aa10.13□□□□□ -0.79
SMPDL3B-205ENST00000548116 SPAG8Q99932 426 aaPredicted RBP10.13□□□□□ -0.79
SMPDL3B-205ENST00000548116 TENM1Q9UKZ4 2725 aa10.12□□□□□ -0.79
SMPDL3B-205ENST00000548116 C5orf52A6NGY3 159 aa10.12□□□□□ -0.79
SMPDL3B-205ENST00000548116 KLLNB2CW77 178 aa10.12□□□□□ -0.79
SMPDL3B-205ENST00000548116 DEFB131AP59861 70 aa10.12□□□□□ -0.79
SMPDL3B-205ENST00000548116 SNRPEP62304 92 aaKnown RBP10.12□□□□□ -0.79
SMPDL3B-205ENST00000548116 EBLN2Q6P2I7 272 aa10.12□□□□□ -0.79
SMPDL3B-205ENST00000548116 XKRY2A2RUG3 117 aa10.11□□□□□ -0.79
SMPDL3B-205ENST00000548116 GPX1P07203 203 aa10.11□□□□□ -0.79
SMPDL3B-205ENST00000548116 ARMS2P0C7Q2 107 aa10.11□□□□□ -0.79
SMPDL3B-205ENST00000548116 IGLC6P0CF74 106 aa10.11□□□□□ -0.79
SMPDL3B-205ENST00000548116 Q6AWC8 147 aa10.11□□□□□ -0.79
SMPDL3B-205ENST00000548116 ODF3Q96PU9 254 aa10.11□□□□□ -0.79
SMPDL3B-205ENST00000548116 GRIFINA4D1Z8 144 aa10.11□□□□□ -0.79
SMPDL3B-205ENST00000548116 MT-ND6P03923 174 aa10.11□□□□□ -0.79
SMPDL3B-205ENST00000548116 RNASE4P34096 147 aaKnown RBP10.11□□□□□ -0.79
SMPDL3B-205ENST00000548116 RAB4BP61018 213 aa10.11□□□□□ -0.79
SMPDL3B-205ENST00000548116 HBBP68871 147 aa10.11□□□□□ -0.79
SMPDL3B-205ENST00000548116 LYZL1Q6UWQ5 148 aa10.11□□□□□ -0.79
SMPDL3B-205ENST00000548116 LINC00482Q8N8I6 264 aa10.11□□□□□ -0.79
SMPDL3B-205ENST00000548116 CITED1Q99966 193 aa10.11□□□□□ -0.79
SMPDL3B-205ENST00000548116 MAP6D1Q9H9H5 199 aa10.11□□□□□ -0.79
SMPDL3B-205ENST00000548116 A0A1B0GUT8 65 aa10.1□□□□□ -0.79
SMPDL3B-205ENST00000548116 OR4C46A6NHA9 309 aa10.1□□□□□ -0.79
SMPDL3B-205ENST00000548116 KNCNA6PVL3 124 aa10.1□□□□□ -0.79
SMPDL3B-205ENST00000548116 SAP30O75446 220 aa10.1□□□□□ -0.79
SMPDL3B-205ENST00000548116 HLA-DQA1P01909 254 aa10.1□□□□□ -0.79
SMPDL3B-205ENST00000548116 S100A6P06703 90 aa10.1□□□□□ -0.79
SMPDL3B-205ENST00000548116 CAMPP49913 170 aa10.1□□□□□ -0.79
SMPDL3B-205ENST00000548116 NDUFA6P56556 154 aa10.1□□□□□ -0.79
SMPDL3B-205ENST00000548116 ZNF124Q15973 351 aa10.1□□□□□ -0.79
SMPDL3B-205ENST00000548116 AMTNQ6UX39 209 aa10.1□□□□□ -0.79
SMPDL3B-205ENST00000548116 TPPP3Q9BW30 176 aa10.1□□□□□ -0.79
SMPDL3B-205ENST00000548116 TRAV21A0A0B4J279 112 aa10.09□□□□□ -0.79
SMPDL3B-205ENST00000548116 PCP4L1A6NKN8 68 aa10.09□□□□□ -0.79
SMPDL3B-205ENST00000548116 A8MTW9 85 aa10.09□□□□□ -0.79
SMPDL3B-205ENST00000548116 DUSP14O95147 198 aaKnown RBP10.09□□□□□ -0.79
SMPDL3B-205ENST00000548116 IGKV3-20P01619 116 aa10.09□□□□□ -0.79
SMPDL3B-205ENST00000548116 IGLV1-51P01701 117 aa10.09□□□□□ -0.79
SMPDL3B-205ENST00000548116 CTRLP40313 264 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms