RNA–Protein interactions for RNA: ENST00000542002.5

YBX3-212, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-212ENST00000542002 A0A0D9SG52 128 aa6.86□□□□□ -1.31
YBX3-212ENST00000542002 TRBV7-9A0A0J9YWB2 115 aa6.86□□□□□ -1.31
YBX3-212ENST00000542002 CTXND1A0A1B0GTU2 59 aa6.86□□□□□ -1.31
YBX3-212ENST00000542002 IGLV2-11P01706 119 aa6.86□□□□□ -1.31
YBX3-212ENST00000542002 ZNF493Q6ZR52 646 aa6.86□□□□□ -1.31
YBX3-212ENST00000542002 TCTE3Q8IZS6 198 aa6.86□□□□□ -1.31
YBX3-212ENST00000542002 LINC00612Q8N6U2 182 aa6.86□□□□□ -1.31
YBX3-212ENST00000542002 CMTM2Q8TAZ6 248 aa6.86□□□□□ -1.31
YBX3-212ENST00000542002 LINC00479Q96M42 142 aa6.86□□□□□ -1.31
YBX3-212ENST00000542002 PYGO2Q9BRQ0 406 aa6.86□□□□□ -1.31
YBX3-212ENST00000542002 LINC00467Q9BRT7 94 aa6.86□□□□□ -1.31
YBX3-212ENST00000542002 GSN-AS1Q9NRJ2 163 aa6.86□□□□□ -1.31
YBX3-212ENST00000542002 EPDR1Q9UM22 224 aa6.86□□□□□ -1.31
YBX3-212ENST00000542002 KLF12Q9Y4X4 402 aa6.86□□□□□ -1.31
YBX3-212ENST00000542002 DNAH6Q9C0G6 4158 aa6.86□□□□□ -1.31
YBX3-212ENST00000542002 hCG_2014768A0A024R1R8 64 aa6.85□□□□□ -1.31
YBX3-212ENST00000542002 TEX48A0A1B0GUV7 120 aa6.85□□□□□ -1.31
YBX3-212ENST00000542002 A0A1B0GVG6 124 aa6.85□□□□□ -1.31
YBX3-212ENST00000542002 CBY3A6NI87 242 aa6.85□□□□□ -1.31
YBX3-212ENST00000542002 BCL2L11O43521 198 aa6.85□□□□□ -1.31
YBX3-212ENST00000542002 TCRAP04437 139 aa6.85□□□□□ -1.31
YBX3-212ENST00000542002 TCTAP57738 103 aa6.85□□□□□ -1.31
YBX3-212ENST00000542002 UBE2G2P60604 165 aa6.85□□□□□ -1.31
YBX3-212ENST00000542002 ANXA2RQ3ZCQ2 193 aa6.85□□□□□ -1.31
YBX3-212ENST00000542002 AKR1C8PQ5T2L2 129 aa6.85□□□□□ -1.31
YBX3-212ENST00000542002 CCDC28AQ8IWP9 274 aa6.85□□□□□ -1.31
YBX3-212ENST00000542002 ARL6IP6Q8N6S5 226 aa6.85□□□□□ -1.31
YBX3-212ENST00000542002 TMED6Q8WW62 240 aa6.85□□□□□ -1.31
YBX3-212ENST00000542002 ZNF471Q9BX82 626 aaPredicted RBP6.85□□□□□ -1.31
YBX3-212ENST00000542002 TMEM167BQ9NRX6 74 aa6.85□□□□□ -1.31
YBX3-212ENST00000542002 IGHV1OR15-1A0A075B7D0 117 aa6.84□□□□□ -1.31
YBX3-212ENST00000542002 A0A1W2PRE2 83 aa6.84□□□□□ -1.31
YBX3-212ENST00000542002 GAGE12BA1L429 117 aa6.84□□□□□ -1.31
YBX3-212ENST00000542002 FAM74A7A6NL05 159 aa6.84□□□□□ -1.31
YBX3-212ENST00000542002 GAGE7O76087 117 aa6.84□□□□□ -1.31
YBX3-212ENST00000542002 SEC11BP0C7V7 166 aa6.84□□□□□ -1.31
YBX3-212ENST00000542002 GAGE12FP0CL80 117 aa6.84□□□□□ -1.31
YBX3-212ENST00000542002 GAGE12GP0CL81 117 aa6.84□□□□□ -1.31
YBX3-212ENST00000542002 GAGE12IP0CL82 117 aa6.84□□□□□ -1.31
YBX3-212ENST00000542002 ZNF80P51504 273 aaPredicted RBP6.84□□□□□ -1.31
YBX3-212ENST00000542002 DAZ2Q13117 558 aaKnown RBP6.84□□□□□ -1.31
YBX3-212ENST00000542002 FAM74A1Q5RGS3 127 aa6.84□□□□□ -1.31
YBX3-212ENST00000542002 MUC21Q5SSG8 566 aa6.84□□□□□ -1.31
YBX3-212ENST00000542002 Q6AWC8 147 aa6.84□□□□□ -1.31
YBX3-212ENST00000542002 TMEM88Q6PEY1 159 aa6.84□□□□□ -1.31
YBX3-212ENST00000542002 Q6ZTI0 123 aa6.84□□□□□ -1.31
YBX3-212ENST00000542002 IQCF2Q8IXL9 164 aa6.84□□□□□ -1.31
YBX3-212ENST00000542002 EIF4E3Q8N5X7 224 aaKnown RBP6.84□□□□□ -1.31
YBX3-212ENST00000542002 MDFICQ9P1T7 246 aa6.84□□□□□ -1.31
YBX3-212ENST00000542002 LENEPQ9Y5L5 61 aa6.84□□□□□ -1.31
YBX3-212ENST00000542002 TRAV34A0A0B4J273 112 aa6.83□□□□□ -1.32
YBX3-212ENST00000542002 KANTRA0A1W2PQU2 76 aa6.83□□□□□ -1.32
YBX3-212ENST00000542002 MAP1LC3B2A6NCE7 125 aa6.83□□□□□ -1.32
YBX3-212ENST00000542002 F5H768 121 aa6.83□□□□□ -1.32
YBX3-212ENST00000542002 F6UZH7 168 aa6.83□□□□□ -1.32
YBX3-212ENST00000542002 RGS13O14921 159 aa6.83□□□□□ -1.32
YBX3-212ENST00000542002 GNRH2O43555 120 aa6.83□□□□□ -1.32
YBX3-212ENST00000542002 HOXA5P20719 270 aa6.83□□□□□ -1.32
YBX3-212ENST00000542002 C5orf17Q8NAS9 161 aa6.83□□□□□ -1.32
YBX3-212ENST00000542002 MBD3L1Q8WWY6 194 aa6.83□□□□□ -1.32
YBX3-212ENST00000542002 C8orf49Q96NF6 230 aa6.83□□□□□ -1.32
YBX3-212ENST00000542002 NDUFAF3Q9BU61 184 aa6.83□□□□□ -1.32
YBX3-212ENST00000542002 MAP1LC3BQ9GZQ8 125 aa6.83□□□□□ -1.32
YBX3-212ENST00000542002 TREM1Q9NP99 234 aa6.83□□□□□ -1.32
YBX3-212ENST00000542002 C11orf21Q9P2W6 132 aa6.83□□□□□ -1.32
YBX3-212ENST00000542002 PSG8Q9UQ74 426 aa6.83□□□□□ -1.32
YBX3-212ENST00000542002 DNAH10Q8IVF4 4471 aa6.83□□□□□ -1.32
YBX3-212ENST00000542002 FRAS1Q86XX4 4008 aa6.83□□□□□ -1.32
YBX3-212ENST00000542002 SNURFLB1AK76 121 aa6.82□□□□□ -1.32
YBX3-212ENST00000542002 SPINK4O60575 86 aa6.82□□□□□ -1.32
YBX3-212ENST00000542002 C1QBP02746 253 aa6.82□□□□□ -1.32
YBX3-212ENST00000542002 CCL20P78556 96 aa6.82□□□□□ -1.32
YBX3-212ENST00000542002 FAM213BQ8TBF2 198 aa6.82□□□□□ -1.32
YBX3-212ENST00000542002 SFT2D1Q8WV19 159 aa6.82□□□□□ -1.32
YBX3-212ENST00000542002 FAM210BQ96KR6 192 aa6.82□□□□□ -1.32
YBX3-212ENST00000542002 DNAH2Q9P225 4427 aa6.81□□□□□ -1.32
YBX3-212ENST00000542002 A0A1B0GV50 99 aa6.81□□□□□ -1.32
YBX3-212ENST00000542002 PFDN1O60925 122 aa6.81□□□□□ -1.32
YBX3-212ENST00000542002 ATP5G1P05496 136 aa6.81□□□□□ -1.32
YBX3-212ENST00000542002 ATP5G3P48201 142 aa6.81□□□□□ -1.32
YBX3-212ENST00000542002 TCL1AP56279 114 aa6.81□□□□□ -1.32
YBX3-212ENST00000542002 FLI1Q01543 452 aaPredicted RBP6.81□□□□□ -1.32
YBX3-212ENST00000542002 PRNTQ86SH4 94 aa6.81□□□□□ -1.32
YBX3-212ENST00000542002 CYB561D1Q8N8Q1 229 aa6.81□□□□□ -1.32
YBX3-212ENST00000542002 ZNF680Q8NEM1 530 aa6.81□□□□□ -1.32
YBX3-212ENST00000542002 STOML3Q8TAV4 291 aa6.81□□□□□ -1.32
YBX3-212ENST00000542002 ATG101Q9BSB4 218 aa6.81□□□□□ -1.32
YBX3-212ENST00000542002 TRGV1A0A0A0MS02 117 aa6.8□□□□□ -1.32
YBX3-212ENST00000542002 SERTM2A0A1B0GWG4 89 aa6.8□□□□□ -1.32
YBX3-212ENST00000542002 UMAD1C9J7I0 102 aa6.8□□□□□ -1.32
YBX3-212ENST00000542002 PAGE4O60829 102 aa6.8□□□□□ -1.32
YBX3-212ENST00000542002 IFNA7P01567 189 aa6.8□□□□□ -1.32
YBX3-212ENST00000542002 TPT1P13693 172 aaKnown RBP6.8□□□□□ -1.32
YBX3-212ENST00000542002 OR5I1Q13606 314 aa6.8□□□□□ -1.32
YBX3-212ENST00000542002 TMEM183BQ1AE95 376 aa6.8□□□□□ -1.32
YBX3-212ENST00000542002 TDRG1Q3Y452 100 aa6.8□□□□□ -1.32
YBX3-212ENST00000542002 IBA57Q5T440 356 aaKnown RBP6.8□□□□□ -1.32
YBX3-212ENST00000542002 AKAP14Q86UN6 197 aa6.8□□□□□ -1.32
YBX3-212ENST00000542002 ZNF575Q86XF7 245 aa6.8□□□□□ -1.32
YBX3-212ENST00000542002 TMEM183AQ8IXX5 376 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms