RNA–Protein interactions for RNA: ENST00000536255.6

RPAIN-205, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-205ENST00000536255 RBMY1CP0DJD4 496 aa9.74□□□□□ -0.85
RPAIN-205ENST00000536255 BLOC1S1P78537 153 aa9.74□□□□□ -0.85
RPAIN-205ENST00000536255 RBMY1FQ15415 496 aaKnown RBP9.74□□□□□ -0.85
RPAIN-205ENST00000536255 CCDC28AQ8IWP9 274 aa9.74□□□□□ -0.85
RPAIN-205ENST00000536255 ZFAND2AQ8N6M9 145 aa9.74□□□□□ -0.85
RPAIN-205ENST00000536255 C11orf45Q8TAV5 145 aa9.74□□□□□ -0.85
RPAIN-205ENST00000536255 PYGO2Q9BRQ0 406 aa9.74□□□□□ -0.85
RPAIN-205ENST00000536255 TRAV8-1A0A0A6YYK1 113 aa9.73□□□□□ -0.85
RPAIN-205ENST00000536255 ZNF705GA8MUZ8 300 aaPredicted RBP9.73□□□□□ -0.85
RPAIN-205ENST00000536255 IFNA1P01562 189 aa9.73□□□□□ -0.85
RPAIN-205ENST00000536255 HTN1P15515 57 aa9.73□□□□□ -0.85
RPAIN-205ENST00000536255 FLI1Q01543 452 aaPredicted RBP9.73□□□□□ -0.85
RPAIN-205ENST00000536255 BTN1A1Q13410 526 aa9.73□□□□□ -0.85
RPAIN-205ENST00000536255 CEMP1Q6PRD7 247 aaPredicted RBP9.73□□□□□ -0.85
RPAIN-205ENST00000536255 ZNF493Q6ZR52 646 aa9.73□□□□□ -0.85
RPAIN-205ENST00000536255 C16orf74Q96GX8 76 aa9.73□□□□□ -0.85
RPAIN-205ENST00000536255 TXNDC17Q9BRA2 123 aa9.73□□□□□ -0.85
RPAIN-205ENST00000536255 TREM1Q9NP99 234 aa9.73□□□□□ -0.85
RPAIN-205ENST00000536255 PLECQ15149 4684 aaKnown RBP9.73□□□□□ -0.85
RPAIN-205ENST00000536255 C11orf94C9JXX5 98 aa9.72□□□□□ -0.85
RPAIN-205ENST00000536255 EMP1P54849 157 aa9.72□□□□□ -0.85
RPAIN-205ENST00000536255 NANOS2P60321 138 aaKnown RBP9.72□□□□□ -0.85
RPAIN-205ENST00000536255 SAPCD1Q5SSQ6 148 aa9.72□□□□□ -0.85
RPAIN-205ENST00000536255 TMEM263Q8WUH6 116 aaKnown RBP9.72□□□□□ -0.85
RPAIN-205ENST00000536255 PHLDA1Q8WV24 401 aaPredicted RBP9.72□□□□□ -0.85
RPAIN-205ENST00000536255 LYSTQ99698 3801 aa9.72□□□□□ -0.85
RPAIN-205ENST00000536255 GNG13Q9P2W3 67 aa9.72□□□□□ -0.85
RPAIN-205ENST00000536255 PSG8Q9UQ74 426 aa9.72□□□□□ -0.85
RPAIN-205ENST00000536255 RGS13O14921 159 aa9.71□□□□□ -0.86
RPAIN-205ENST00000536255 ZNF324O75467 553 aaPredicted RBP9.71□□□□□ -0.86
RPAIN-205ENST00000536255 SPART-AS1P0CW21 52 aa9.71□□□□□ -0.86
RPAIN-205ENST00000536255 TAGLN2P37802 199 aaKnown RBP9.71□□□□□ -0.86
RPAIN-205ENST00000536255 AKR1C3P42330 323 aa9.71□□□□□ -0.86
RPAIN-205ENST00000536255 ATP5G3P48201 142 aa9.71□□□□□ -0.86
RPAIN-205ENST00000536255 UBE2G1P62253 170 aa9.71□□□□□ -0.86
RPAIN-205ENST00000536255 Q6AWC8 147 aa9.71□□□□□ -0.86
RPAIN-205ENST00000536255 PRNTQ86SH4 94 aa9.71□□□□□ -0.86
RPAIN-205ENST00000536255 FMC1Q96HJ9 113 aa9.71□□□□□ -0.86
RPAIN-205ENST00000536255 SGK494Q96LW2 274 aa9.71□□□□□ -0.86
RPAIN-205ENST00000536255 LINC00467Q9BRT7 94 aa9.71□□□□□ -0.86
RPAIN-205ENST00000536255 KLK5Q9Y337 293 aaPredicted RBP9.71□□□□□ -0.86
RPAIN-205ENST00000536255 TRAV21A0A0B4J279 112 aa9.7□□□□□ -0.86
RPAIN-205ENST00000536255 IGLV2-11P01706 119 aa9.7□□□□□ -0.86
RPAIN-205ENST00000536255 S100A9P06702 114 aaKnown RBP9.7□□□□□ -0.86
RPAIN-205ENST00000536255 CCL20P78556 96 aa9.7□□□□□ -0.86
RPAIN-205ENST00000536255 PRR9Q5T870 116 aa9.7□□□□□ -0.86
RPAIN-205ENST00000536255 EIF4E3Q8N5X7 224 aaKnown RBP9.7□□□□□ -0.86
RPAIN-205ENST00000536255 ZNF680Q8NEM1 530 aa9.7□□□□□ -0.86
RPAIN-205ENST00000536255 IGHV1OR15-1A0A075B7D0 117 aa9.69□□□□□ -0.86
RPAIN-205ENST00000536255 TRAV34A0A0B4J273 112 aa9.69□□□□□ -0.86
RPAIN-205ENST00000536255 CBY3A6NI87 242 aa9.69□□□□□ -0.86
RPAIN-205ENST00000536255 LYRM9A8MSI8 78 aa9.69□□□□□ -0.86
RPAIN-205ENST00000536255 AZU1P20160 251 aa9.69□□□□□ -0.86
RPAIN-205ENST00000536255 ANXA2RQ3ZCQ2 193 aa9.69□□□□□ -0.86
RPAIN-205ENST00000536255 SMUG1Q53HV7 270 aa9.69□□□□□ -0.86
RPAIN-205ENST00000536255 RNASE8Q8TDE3 154 aaKnown RBP9.69□□□□□ -0.86
RPAIN-205ENST00000536255 LINC00479Q96M42 142 aa9.69□□□□□ -0.86
RPAIN-205ENST00000536255 DKK2Q9UBU2 259 aa9.69□□□□□ -0.86
RPAIN-205ENST00000536255 ZFP30Q9Y2G7 519 aa9.69□□□□□ -0.86
RPAIN-205ENST00000536255 TIMM8BQ9Y5J9 83 aaPredicted RBP9.69□□□□□ -0.86
RPAIN-205ENST00000536255 DNAH1Q9P2D7 4330 aa9.69□□□□□ -0.86
RPAIN-205ENST00000536255 SNURFLB1AK76 121 aa9.68□□□□□ -0.86
RPAIN-205ENST00000536255 PRM2P04554 102 aa9.68□□□□□ -0.86
RPAIN-205ENST00000536255 BCL2P10415 239 aa9.68□□□□□ -0.86
RPAIN-205ENST00000536255 TMEM183BQ1AE95 376 aa9.68□□□□□ -0.86
RPAIN-205ENST00000536255 FAM222AQ5U5X8 452 aa9.68□□□□□ -0.86
RPAIN-205ENST00000536255 FAM159AQ6UWV7 190 aa9.68□□□□□ -0.86
RPAIN-205ENST00000536255 Q86TA4 180 aa9.68□□□□□ -0.86
RPAIN-205ENST00000536255 TVP23CQ96ET8 276 aa9.68□□□□□ -0.86
RPAIN-205ENST00000536255 CELA1Q9UNI1 258 aa9.68□□□□□ -0.86
RPAIN-205ENST00000536255 KLF12Q9Y4X4 402 aa9.68□□□□□ -0.86
RPAIN-205ENST00000536255 TRBV6-1A0A0K0K1D8 114 aa9.67□□□□□ -0.86
RPAIN-205ENST00000536255 SCO2A0A1W2PP80 73 aa9.67□□□□□ -0.86
RPAIN-205ENST00000536255 PDE6DO43924 150 aa9.67□□□□□ -0.86
RPAIN-205ENST00000536255 GCGP01275 180 aa9.67□□□□□ -0.86
RPAIN-205ENST00000536255 PFN1P07737 140 aaKnown RBP9.67□□□□□ -0.86
RPAIN-205ENST00000536255 MEF2BQ02080 365 aaPredicted RBP9.67□□□□□ -0.86
RPAIN-205ENST00000536255 TEX261Q6UWH6 196 aa9.67□□□□□ -0.86
RPAIN-205ENST00000536255 LYPD6BQ8NI32 183 aa9.67□□□□□ -0.86
RPAIN-205ENST00000536255 C2CD4CQ8TF44 421 aa9.67□□□□□ -0.86
RPAIN-205ENST00000536255 C8orf49Q96NF6 230 aa9.67□□□□□ -0.86
RPAIN-205ENST00000536255 VAX2Q9UIW0 290 aa9.67□□□□□ -0.86
RPAIN-205ENST00000536255 TRGV11A0A075B6L2 103 aa9.66□□□□□ -0.86
RPAIN-205ENST00000536255 PLAC8L1A1L4L8 177 aa9.66□□□□□ -0.86
RPAIN-205ENST00000536255 DAD1P61803 113 aa9.66□□□□□ -0.86
RPAIN-205ENST00000536255 IBA57Q5T440 356 aaKnown RBP9.66□□□□□ -0.86
RPAIN-205ENST00000536255 Q6ZTC4 211 aa9.66□□□□□ -0.86
RPAIN-205ENST00000536255 KCNS1Q96KK3 526 aa9.66□□□□□ -0.86
RPAIN-205ENST00000536255 NAGKQ9UJ70 344 aa9.66□□□□□ -0.86
RPAIN-205ENST00000536255 HYDINQ4G0P3 5121 aa9.66□□□□□ -0.86
RPAIN-205ENST00000536255 TRAV10A0A0B4J240 114 aa9.65□□□□□ -0.86
RPAIN-205ENST00000536255 LTAP01374 205 aa9.65□□□□□ -0.86
RPAIN-205ENST00000536255 C12orf74Q32Q52 190 aa9.65□□□□□ -0.86
RPAIN-205ENST00000536255 TDRG1Q3Y452 100 aa9.65□□□□□ -0.86
RPAIN-205ENST00000536255 MUC21Q5SSG8 566 aa9.65□□□□□ -0.86
RPAIN-205ENST00000536255 LINC00476Q8WZB0 136 aa9.65□□□□□ -0.86
RPAIN-205ENST00000536255 C11orf52Q96A22 123 aa9.65□□□□□ -0.86
RPAIN-205ENST00000536255 SDF2L1Q9HCN8 221 aa9.65□□□□□ -0.86
RPAIN-205ENST00000536255 NOP10Q9NPE3 64 aaKnown RBP9.65□□□□□ -0.86
RPAIN-205ENST00000536255 ALMS1Q8TCU4 4167 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 142 ms