RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 HBBP68871 147 aa9.42□□□□□ -0.9
SCARB1-204ENST00000535005 OCIAD2Q56VL3 154 aa9.42□□□□□ -0.9
SCARB1-204ENST00000535005 HIST2H2BDQ6DRA6 164 aa9.42□□□□□ -0.9
SCARB1-204ENST00000535005 NUP35Q8NFH5 326 aa9.42□□□□□ -0.9
SCARB1-204ENST00000535005 STXBP6Q8NFX7 210 aa9.42□□□□□ -0.9
SCARB1-204ENST00000535005 ZNF414Q96IQ9 312 aa9.42□□□□□ -0.9
SCARB1-204ENST00000535005 GFRA4Q9GZZ7 299 aa9.42□□□□□ -0.9
SCARB1-204ENST00000535005 OR4C46A6NHA9 309 aa9.41□□□□□ -0.9
SCARB1-204ENST00000535005 TAX1BP3O14907 124 aa9.41□□□□□ -0.9
SCARB1-204ENST00000535005 HIST1H1AQ02539 215 aaPredicted RBP9.41□□□□□ -0.9
SCARB1-204ENST00000535005 BVES-AS1Q5T3Y7 98 aa9.41□□□□□ -0.9
SCARB1-204ENST00000535005 C8orf86Q6ZUL3 223 aa9.41□□□□□ -0.9
SCARB1-204ENST00000535005 OR1N2Q8NGR9 330 aa9.41□□□□□ -0.9
SCARB1-204ENST00000535005 FAM167A-AS1Q96KT0 104 aa9.41□□□□□ -0.9
SCARB1-204ENST00000535005 CST9LQ9H4G1 147 aa9.41□□□□□ -0.9
SCARB1-204ENST00000535005 ZNF492Q9P255 531 aa9.41□□□□□ -0.9
SCARB1-204ENST00000535005 IGHV4OR15-8A0A075B7B6 117 aa9.4□□□□□ -0.9
SCARB1-204ENST00000535005 A0A087WW49 117 aa9.4□□□□□ -0.9
SCARB1-204ENST00000535005 LINC01619G3V211 115 aa9.4□□□□□ -0.9
SCARB1-204ENST00000535005 SYS1-DBNDD2H3BUS1 97 aa9.4□□□□□ -0.9
SCARB1-204ENST00000535005 FHL3Q13643 280 aa9.4□□□□□ -0.9
SCARB1-204ENST00000535005 SHISA2Q6UWI4 295 aa9.4□□□□□ -0.9
SCARB1-204ENST00000535005 GPHB5Q86YW7 130 aa9.4□□□□□ -0.9
SCARB1-204ENST00000535005 ATOH7Q8N100 152 aa9.4□□□□□ -0.9
SCARB1-204ENST00000535005 C3orf56Q8N813 242 aa9.4□□□□□ -0.9
SCARB1-204ENST00000535005 NUDT10Q8NFP7 164 aa9.4□□□□□ -0.9
SCARB1-204ENST00000535005 DPF1Q92782 380 aa9.4□□□□□ -0.9
SCARB1-204ENST00000535005 NUDT11Q96G61 164 aa9.4□□□□□ -0.9
SCARB1-204ENST00000535005 HSPB8Q9UJY1 196 aa9.4□□□□□ -0.9
SCARB1-204ENST00000535005 A0A1W2PRX2 142 aa9.4□□□□□ -0.91
SCARB1-204ENST00000535005 A8MWL6 223 aa9.4□□□□□ -0.91
SCARB1-204ENST00000535005 MYCNOSP40205 109 aa9.4□□□□□ -0.91
SCARB1-204ENST00000535005 SEC11AP67812 179 aa9.4□□□□□ -0.91
SCARB1-204ENST00000535005 NSUN5P1Q3KNT7 163 aa9.4□□□□□ -0.91
SCARB1-204ENST00000535005 KRTAP21-3Q3LHN1 58 aa9.4□□□□□ -0.91
SCARB1-204ENST00000535005 OR11H1Q8NG94 326 aa9.4□□□□□ -0.91
SCARB1-204ENST00000535005 RAX2Q96IS3 184 aa9.4□□□□□ -0.91
SCARB1-204ENST00000535005 SLC25A2Q9BXI2 301 aa9.4□□□□□ -0.91
SCARB1-204ENST00000535005 KLF12Q9Y4X4 402 aa9.4□□□□□ -0.91
SCARB1-204ENST00000535005 CCL24O00175 119 aa9.39□□□□□ -0.91
SCARB1-204ENST00000535005 NDUFA4O00483 81 aa9.39□□□□□ -0.91
SCARB1-204ENST00000535005 PSG1P11464 419 aa9.39□□□□□ -0.91
SCARB1-204ENST00000535005 DEFB136Q30KP8 78 aa9.39□□□□□ -0.91
SCARB1-204ENST00000535005 MAJINQ3KP22 176 aa9.39□□□□□ -0.91
SCARB1-204ENST00000535005 GDF5OSQ5U4N7 250 aa9.39□□□□□ -0.91
SCARB1-204ENST00000535005 MDFIQ99750 246 aa9.39□□□□□ -0.91
SCARB1-204ENST00000535005 VPS25Q9BRG1 176 aa9.39□□□□□ -0.91
SCARB1-204ENST00000535005 SCRT2Q9NQ03 307 aa9.39□□□□□ -0.91
SCARB1-204ENST00000535005 HIGD1CA8MV81 97 aa9.38□□□□□ -0.91
SCARB1-204ENST00000535005 LEPROTL1O95214 131 aa9.38□□□□□ -0.91
SCARB1-204ENST00000535005 HOXD3P31249 432 aaPredicted RBP9.38□□□□□ -0.91
SCARB1-204ENST00000535005 PLP1P60201 277 aa9.38□□□□□ -0.91
SCARB1-204ENST00000535005 FAM106AQ4KMX7 169 aa9.38□□□□□ -0.91
SCARB1-204ENST00000535005 MPV17L2Q567V2 206 aa9.38□□□□□ -0.91
SCARB1-204ENST00000535005 NDFIP1Q9BT67 221 aa9.38□□□□□ -0.91
SCARB1-204ENST00000535005 PAXXQ9BUH6 204 aa9.38□□□□□ -0.91
SCARB1-204ENST00000535005 MAP1LC3CQ9BXW4 147 aa9.38□□□□□ -0.91
SCARB1-204ENST00000535005 RPP21Q9H633 154 aaKnown RBP9.38□□□□□ -0.91
SCARB1-204ENST00000535005 WI2-2373I1.2A0A1W2PRP0 233 aa9.38□□□□□ -0.91
SCARB1-204ENST00000535005 LGALS9O00182 355 aa9.38□□□□□ -0.91
SCARB1-204ENST00000535005 COX7A2P2O60397 106 aa9.38□□□□□ -0.91
SCARB1-204ENST00000535005 RNF151Q2KHN1 245 aa9.38□□□□□ -0.91
SCARB1-204ENST00000535005 PRR27Q6MZM9 219 aa9.38□□□□□ -0.91
SCARB1-204ENST00000535005 SPATA12Q7Z6I5 190 aa9.38□□□□□ -0.91
SCARB1-204ENST00000535005 ZFAND3Q9H8U3 227 aa9.38□□□□□ -0.91
SCARB1-204ENST00000535005 IGHV1-24A0A0C4DH33 117 aa9.37□□□□□ -0.91
SCARB1-204ENST00000535005 NUDT3O95989 172 aa9.37□□□□□ -0.91
SCARB1-204ENST00000535005 GATA2P23769 480 aaPredicted RBP9.37□□□□□ -0.91
SCARB1-204ENST00000535005 C10orf113Q5VZT2 155 aa9.37□□□□□ -0.91
SCARB1-204ENST00000535005 TCF24Q7RTU0 167 aa9.37□□□□□ -0.91
SCARB1-204ENST00000535005 FMC1Q96HJ9 113 aa9.37□□□□□ -0.91
SCARB1-204ENST00000535005 GPR82Q96P67 336 aa9.37□□□□□ -0.91
SCARB1-204ENST00000535005 DUX3Q96PT4 197 aa9.37□□□□□ -0.91
SCARB1-204ENST00000535005 IGHV3-35A0A0C4DH35 117 aa9.36□□□□□ -0.91
SCARB1-204ENST00000535005 K7EMT4 169 aa9.36□□□□□ -0.91
SCARB1-204ENST00000535005 URB1-AS1Q96HZ7 61 aa9.36□□□□□ -0.91
SCARB1-204ENST00000535005 A0A1B0GW15 77 aa9.35□□□□□ -0.91
SCARB1-204ENST00000535005 CA1P00915 261 aaPredicted RBP9.35□□□□□ -0.91
SCARB1-204ENST00000535005 IL4P05112 153 aa9.35□□□□□ -0.91
SCARB1-204ENST00000535005 SLURP1P55000 103 aa9.35□□□□□ -0.91
SCARB1-204ENST00000535005 LINC01545Q5VT33 79 aa9.35□□□□□ -0.91
SCARB1-204ENST00000535005 UNQ9165/PRO28630Q6UXU0 137 aa9.35□□□□□ -0.91
SCARB1-204ENST00000535005 RBPMS2Q6ZRY4 209 aaKnown RBP9.35□□□□□ -0.91
SCARB1-204ENST00000535005 GTF2H5Q6ZYL4 71 aa9.35□□□□□ -0.91
SCARB1-204ENST00000535005 RNF125Q96EQ8 232 aa9.35□□□□□ -0.91
SCARB1-204ENST00000535005 CSTL1Q9H114 145 aa9.35□□□□□ -0.91
SCARB1-204ENST00000535005 COX8AP10176 69 aa9.35□□□□□ -0.91
SCARB1-204ENST00000535005 SYNJ2BPP57105 145 aa9.35□□□□□ -0.91
SCARB1-204ENST00000535005 Q6ZVH6 145 aa9.35□□□□□ -0.91
SCARB1-204ENST00000535005 GATD1Q8NB37 220 aa9.35□□□□□ -0.91
SCARB1-204ENST00000535005 DLX4Q92988 240 aaPredicted RBP9.35□□□□□ -0.91
SCARB1-204ENST00000535005 FXYD5Q96DB9 178 aa9.35□□□□□ -0.91
SCARB1-204ENST00000535005 MLST8Q9BVC4 326 aa9.35□□□□□ -0.91
SCARB1-204ENST00000535005 CLEC5AQ9NY25 188 aa9.35□□□□□ -0.91
SCARB1-204ENST00000535005 EPDR1Q9UM22 224 aa9.35□□□□□ -0.91
SCARB1-204ENST00000535005 UFC1Q9Y3C8 167 aa9.35□□□□□ -0.91
SCARB1-204ENST00000535005 WNK1Q9H4A3 2382 aa9.35□□□□□ -0.91
SCARB1-204ENST00000535005 LOC102724200A0A096LPH7 203 aaPredicted RBP9.34□□□□□ -0.91
SCARB1-204ENST00000535005 TRBV6-1A0A0K0K1D8 114 aa9.34□□□□□ -0.91
SCARB1-204ENST00000535005 C19orf71A6NCJ1 209 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 113.6 ms